EnhancerDB
  1. Home
  2. Enhancers
  3. vista28164[chr19:1411862-1412243]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28164[chr19:1411862-1412243]
Back to top
Tissue distribution of vista28164
Back to top
Transcription factor that possibly regulate vista28164[chr19:1411862-1412243]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 1411873 1411877 NFE TRANSFAC yes 70780377
chr19 1411873 1411877 NFE TRANSFAC yes 112013633
chr19 1411896 1411906 MZF1 JASPAR yes 70780378
chr19 1411896 1411906 MZF1 JASPAR yes 112013634
chr19 1411906 1411926 ESR1 JASPAR yes 70780379
chr19 1411906 1411926 ESR1 JASPAR yes 112013635
chr19 1411910 1411928 ESR2 JASPAR yes 70780380
chr19 1411910 1411928 ESR2 JASPAR yes 112013636
chr19 1411912 1411916 H4TF2 TRANSFAC yes 70780381
chr19 1411912 1411916 H4TF2 TRANSFAC yes 112013637
chr19 1411928 1411943 JUND JASPAR yes 70780382
chr19 1411928 1411943 JUND JASPAR yes 112013638
chr19 1411929 1411942 JUN JASPAR yes 70780383
chr19 1411929 1411942 JUN JASPAR yes 112013639
chr19 1411930 1411944 BATF3 JASPAR yes 70780384
chr19 1411930 1411944 BATF3 JASPAR yes 112013640
chr19 1411931 1411943 JDP2 JASPAR yes 70780385
chr19 1411931 1411943 JDP2 JASPAR yes 112013641
chr19 1411948 1411960 PKNOX1 JASPAR yes 70780386
chr19 1411948 1411960 PKNOX2 JASPAR yes 70780387
chr19 1411948 1411960 TGIF1 JASPAR yes 70780388
chr19 1411948 1411960 TGIF2 JASPAR yes 70780389
chr19 1411948 1411960 PKNOX1 JASPAR yes 112013642
chr19 1411948 1411960 PKNOX2 JASPAR yes 112013643
chr19 1411948 1411960 TGIF1 JASPAR yes 112013644
chr19 1411948 1411960 TGIF2 JASPAR yes 112013645
chr19 1411956 1411964 MEIS3 JASPAR yes 70780390
chr19 1411956 1411964 MEIS3 JASPAR yes 112013646
chr19 1411968 1411974 NFIC JASPAR yes 70780391
chr19 1411968 1411974 NFIC JASPAR yes 112013647
chr19 1411988 1411998 NEUROG2 JASPAR yes 70780392
chr19 1411988 1411998 NEUROG2 JASPAR yes 112013648
chr19 1411993 1412009 NFYA JASPAR yes 70780393
chr19 1411993 1412009 NFYA JASPAR yes 112013649
chr19 1412016 1412031 TFAP2C JASPAR yes 70780394
chr19 1412016 1412031 TFAP2C JASPAR yes 112013650
chr19 1412024 1412043 RFX2 JASPAR yes 70780395
chr19 1412024 1412043 RFX2 JASPAR yes 112013651
chr19 1412028 1412044 RFX3 JASPAR yes 70780396
chr19 1412028 1412044 RFX4 JASPAR yes 70780397
chr19 1412028 1412044 RFX5 JASPAR yes 70780398
chr19 1412028 1412044 RFX3 JASPAR yes 112013652
chr19 1412028 1412044 RFX4 JASPAR yes 112013653
chr19 1412028 1412044 RFX5 JASPAR yes 112013654
chr19 1412029 1412038 NFIX JASPAR yes 70780399
chr19 1412029 1412038 NFIX JASPAR yes 112013655
chr19 1412031 1412037 NFIC JASPAR yes 70780400
chr19 1412031 1412037 NFIC JASPAR yes 112013656
chr19 1412047 1412051 H4TF2 TRANSFAC yes 70780401
chr19 1412047 1412051 H4TF2 TRANSFAC yes 112013657
chr19 1412056 1412062 MAZ TRANSFAC yes 70780402
chr19 1412056 1412062 MAZ TRANSFAC yes 112013658
chr19 1412058 1412067 HiNF-C TRANSFAC yes 70780403
chr19 1412058 1412067 HiNF-C TRANSFAC yes 112013659
chr19 1412058 1412068 SP1 JASPAR yes 70780404
chr19 1412058 1412068 SP1 JASPAR yes 112013660
chr19 1412059 1412065 SP1 TRANSFAC yes 70780405
chr19 1412059 1412065 SP1 TRANSFAC yes 112013661
chr19 1412060 1412065 SP1 TRANSFAC yes 70780406
chr19 1412060 1412065 SP1 TRANSFAC yes 112013662
chr19 1412061 1412066 SP1 TRANSFAC yes 70780407
chr19 1412061 1412066 SP1 TRANSFAC yes 112013663
chr19 1412061 1412067 SP1 TRANSFAC yes 70780408
chr19 1412061 1412067 SP1 TRANSFAC yes 112013664
chr19 1412078 1412098 PPARG JASPAR yes 70780409
chr19 1412078 1412098 PPARG JASPAR yes 112013665
chr19 1412089 1412100 RUNX1 JASPAR yes 70780410
chr19 1412089 1412100 RUNX1 JASPAR yes 112013666
chr19 1412106 1412113 PEA3 TRANSFAC yes 70780411
chr19 1412106 1412113 PEA3 TRANSFAC yes 112013667
chr19 1412111 1412120 HIC2 JASPAR yes 70780412
chr19 1412111 1412120 HIC2 JASPAR yes 112013668
chr19 1412114 1412118 LFA1 TRANSFAC yes 70780413
chr19 1412114 1412118 LFA1 TRANSFAC yes 112013669
chr19 1412182 1412196 GLIS3 JASPAR yes 70780414
chr19 1412182 1412196 GLIS3 JASPAR yes 112013670
chr19 1412193 1412213 TP63 JASPAR yes 70780415
chr19 1412193 1412213 TP63 JASPAR yes 112013671
chr19 1412208 1412218 MZF1 JASPAR yes 70780416
chr19 1412208 1412218 SP1 JASPAR yes 70780417
chr19 1412208 1412218 ZNF740 JASPAR yes 70780418
chr19 1412208 1412218 MZF1 JASPAR yes 112013672
chr19 1412208 1412218 SP1 JASPAR yes 112013673
chr19 1412208 1412218 ZNF740 JASPAR yes 112013674
chr19 1412209 1412219 ZNF740 JASPAR yes 70780419
chr19 1412209 1412219 ZNF740 JASPAR yes 112013675
chr19 1412210 1412230 PPARG JASPAR yes 70780420
chr19 1412210 1412230 PPARG JASPAR yes 112013676
chr19 1412212 1412230 ESR2 JASPAR yes 70780421
chr19 1412212 1412230 ESR2 JASPAR yes 112013677
chr19 1412215 1412219 LFA1 TRANSFAC yes 70780422
chr19 1412215 1412219 LFA1 TRANSFAC yes 112013678
chr19 1412216 1412227 USF1 JASPAR yes 70780423
chr19 1412216 1412227 USF1 JASPAR yes 112013679
chr19 1412231 1412236 TFAP2A TRANSFAC yes 70780424
chr19 1412231 1412236 TFAP2A TRANSFAC yes 112013680
chr19 1412231 1412237 MZF1 JASPAR yes 70780425
chr19 1412231 1412237 MZF1 JASPAR yes 112013681
SNP sites on vista28164[chr19:1411862-1412243]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 1411864 rs532076401 T G no 5375452
chr19 1412030 rs115634417 G A
NFIX RFX2 RFX3 RFX4 RFX5 TFAP2C
5375453
chr19 1412053 rs539057189 G T no 5375454
chr19 1412213 rs145069256 G A,C,T
ESR2 MZF1 PPARG SP1 TP63 ZNF740
5375455
Genes possibly regulated by vista28164[chr19:1411862-1412243]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 1383526 1395583 + NDUFS7 ENSG00000115286.15 1383526 0.8 1.0 16744 71664
chr19 1397091 1401569 - GAMT ENSG00000130005.7 1401569 0.95 1.0 16745 89707
chr19 1407568 1435719 + DAZAP1 ENSG00000071626.12 1407568 0.68 1.0 16746 95706
chr19 1438358 1440583 + RPS15 ENSG00000115268.5 1438358 0.65 1.0 16747 73885
chr19 1440838 1441937 + AC027307.3 ENSG00000268798.1 1440838 0.73 1.0 16748 71405
chr19 1446300 1473243 + APC2 ENSG00000115266.7 1446300 0.82 1.0 16749 65943
chr19 1461142 1479555 - C19orf25 ENSG00000119559.11 1479555 0.73 1.0 16750 32688
chr19 1481427 1490751 - PCSK4 ENSG00000115257.11 1490751 0.8 1.0 16751 21492
chr19 1491165 1497926 + REEP6 ENSG00000115255.6 1491165 0.98 1.0 16752 21078
Expression level of Genes
Back to top
miRNAs possibly regulated by vista28164[chr19:1411862-1412243]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results