EnhancerDB
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  3. vista2817[chr1:108673419-108673672]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2817[chr1:108673419-108673672]
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Tissue distribution of vista2817
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Transcription factor that possibly regulate vista2817[chr1:108673419-108673672]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 108673425 108673429 YY1 TRANSFAC yes 118345260
chr1 108673426 108673436 NFATC3 JASPAR yes 118345261
chr1 108673427 108673434 NFATC2 JASPAR yes 118345262
chr1 108673432 108673448 SOX4 JASPAR yes 118345263
chr1 108673435 108673439 YY1 TRANSFAC yes 118345264
chr1 108673463 108673473 SP1 JASPAR yes 118345265
chr1 108673463 108673473 SP1 TRANSFAC yes 118345266
chr1 108673464 108673474 SP1 JASPAR yes 118345267
chr1 108673466 108673480 GLIS2 JASPAR yes 118345268
chr1 108673466 108673480 GLIS3 JASPAR yes 118345269
chr1 108673466 108673480 ZIC1 JASPAR yes 118345270
chr1 108673466 108673481 ZIC3 JASPAR yes 118345271
chr1 108673466 108673481 ZIC4 JASPAR yes 118345272
chr1 108673483 108673487 YY1 TRANSFAC yes 118345273
chr1 108673494 108673498 YY1 TRANSFAC yes 118345274
chr1 108673499 108673512 NFKB1 JASPAR yes 118345275
chr1 108673499 108673512 NFKB2 JASPAR yes 118345276
chr1 108673500 108673510 NFKB1 JASPAR yes 118345277
chr1 108673501 108673511 NFKB1 JASPAR yes 118345278
chr1 108673501 108673511 RELA JASPAR yes 118345279
chr1 108673501 108673511 REL JASPAR yes 118345280
chr1 108673505 108673517 INSM1 JASPAR yes 118345281
chr1 108673531 108673545 STAT1 JASPAR yes 118345282
chr1 108673531 108673546 STAT2 JASPAR yes 118345283
chr1 108673545 108673551 HiNF-A TRANSFAC yes 118345284
chr1 108673553 108673559 HiNF-A TRANSFAC yes 118345285
chr1 108673556 108673568 PBX1 JASPAR yes 118345286
chr1 108673562 108673576 CREB3 JASPAR yes 118345287
chr1 108673562 108673576 CREB3L1 JASPAR yes 118345288
chr1 108673590 108673601 FLI1 JASPAR yes 118345289
chr1 108673590 108673603 ELF3 JASPAR yes 118345290
chr1 108673591 108673602 ELF5 JASPAR yes 118345291
chr1 108673591 108673603 EHF JASPAR yes 118345292
chr1 108673591 108673603 ELF1 JASPAR yes 118345293
chr1 108673591 108673603 ELF4 JASPAR yes 118345294
chr1 108673591 108673604 ELF1 JASPAR yes 118345295
chr1 108673594 108673613 PAX5 JASPAR yes 118345296
chr1 108673619 108673626 SPIB JASPAR yes 118345297
chr1 108673640 108673655 ZIC4 JASPAR yes 118345298
chr1 108673642 108673663 ZNF263 JASPAR yes 118345299
chr1 108673653 108673672 CTCF JASPAR yes 118345300
chr1 108673654 108673665 E2F6 JASPAR yes 118345301
SNP sites on vista2817[chr1:108673419-108673672]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 108673469 rs184078033 C T
GLIS2 GLIS3 SP1 ZIC1 ZIC3 ZIC4
541772
chr1 108673474 rs188195664 C A,T
GLIS2 GLIS3 SP1 ZIC1 ZIC3 ZIC4
541773
chr1 108673569 rs569284871 T G
CREB3 CREB3L1
541774
chr1 108673619 rs193165643 C T
SPIB
541775
chr1 108673630 rs568546101 G T no 541776
chr1 108673640 rs534162782 G A
ZIC4
541777
Genes possibly regulated by vista2817[chr1:108673419-108673672]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 108676658 108743471 - SLC25A24 ENSG00000085491.11 108743471 0.74 0.99 955 30201
Expression level of Genes
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miRNAs possibly regulated by vista2817[chr1:108673419-108673672]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results