EnhancerDB

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chrom.	Start	End	TF Name	Source	Predicted site?	Tissue/Cell line	id
chr19	1651288	1651607	RUNX3	UCSC Txn Factor	no	Conserved	108354402
chr19	1651380	1651991	TCF7L2	UCSC Txn Factor	no	Conserved	108354425
chr19	1651371	1651379	MGA	JASPAR	yes		70780627
chr19	1651371	1651379	TBX15	JASPAR	yes		70780628
chr19	1651371	1651379	TBX1	JASPAR	yes		70780629
chr19	1651371	1651379	TBX4	JASPAR	yes		70780630
chr19	1651371	1651379	TBX5	JASPAR	yes		70780631
chr19	1651371	1651381	TBR1	JASPAR	yes		70780632
chr19	1651398	1651404	SP1	TRANSFAC	yes		70780633
chr19	1651398	1651408	SP1	JASPAR	yes		70780634
chr19	1651416	1651430	IRF7	JASPAR	yes		70780635
chr19	1651433	1651443	TBR1	JASPAR	yes		70780636
chr19	1651465	1651474	RUNX2	JASPAR	yes		70780637
chr19	1651465	1651475	RUNX3	JASPAR	yes		70780638
chr19	1651515	1651525	ZNF740	JASPAR	yes		70780639
chr19	1651516	1651526	ZNF740	JASPAR	yes		70780640
chr19	1651518	1651528	ZNF740	JASPAR	yes		70780641
chr19	1651539	1651543	LFA1	TRANSFAC	yes		70780642
chr19	1651540	1651552	TEAD1	JASPAR	yes		70780643
chr19	1651568	1651578	NFKB1	JASPAR	yes		70780644
chr19	1651568	1651579	NFKB1	JASPAR	yes		70780645
chr19	1651624	1651635	TFAP2A	JASPAR	yes		70780646
chr19	1651624	1651635	TFAP2B	JASPAR	yes		70780647
chr19	1651624	1651635	TFAP2C	JASPAR	yes		70780648
chr19	1651628	1651638	SP1	JASPAR	yes		70780649
chr19	1651628	1651642	GLIS2	JASPAR	yes		70780650
chr19	1651630	1651635	SP1	TRANSFAC	yes		70780651
chr19	1651631	1651636	SP1	TRANSFAC	yes		70780652
chr19	1651631	1651637	SP1	TRANSFAC	yes		70780653
chr19	1651631	1651643	ZBTB7B	JASPAR	yes		70780654
chr19	1651631	1651643	ZBTB7C	JASPAR	yes		70780655
chr19	1651656	1651670	EBF1	JASPAR	yes		70780656
chr19	1651663	1651673	SP1	JASPAR	yes		70780657
chr19	1651668	1651673	SP1	TRANSFAC	yes		70780658
chr19	1651677	1651682	ETS2	TRANSFAC	yes		70780659
chr19	1651688	1651698	SP1	JASPAR	yes		70780660
chr19	1651689	1651699	SP1	JASPAR	yes		70780661
chr19	1651690	1651696	SP1	TRANSFAC	yes		70780662
chr19	1651690	1651700	SP1	JASPAR	yes		70780663
chr19	1651691	1651701	SP1	JASPAR	yes		70780664
chr19	1651712	1651717	SP1	TRANSFAC	yes		70780665

chrom	Position	dbSNP ID	Reference Allele	Alternative Allele	is SNP in TFBS	id
chr19	1651386	rs540815142	C	T	RUNX3 TCF7L2	5377228
chr19	1651414	rs559290885	G	A	RUNX3 TCF7L2	5377229
chr19	1651516	rs369712762	G	A	RUNX3 TCF7L2 ZNF740	5377230
chr19	1651568	rs75105382	T	C	NFKB1 RUNX3 TCF7L2	5377231
chr19	1651576	rs75884006	C	G	NFKB1 RUNX3 TCF7L2	5377232
chr19	1651600	rs148128528	G	A,C	RUNX3 TCF7L2	5377233
chr19	1651617	rs558959149	T	C	TCF7L2	5377234

Blank TSI value indicates lack of sufficient expression for calculation
Chrom	Start	End	Strand	Gene Name	Ensembl ID	TSS	TSI of Normal tissues	TSI of Cancer tissues	Distance between enhancer and TSS	id
chr19	1554668	1568057	-	MEX3D	ENSG00000181588.15	1568057	0.64	1.0	16755	16686
chr19	1576639	1592882	-	MBD3	ENSG00000071655.13	1592882	0.54	0.99	16756	41511
chr19	1578338	1605444	-	UQCR11	ENSG00000267059.2	1605444	0.96	0.96	16757	54073
chr19	1597171	1605480	-	UQCR11	ENSG00000127540.7	1605480	0.87	0.98	16758	54109
chr19	1609291	1652604	-	TCF3	ENSG00000071564.10	1652604	0.84	1.0	16759	99126

Blank TSI value indicates lack of sufficient expression for calculation
Chrom	Start	End	Strand	miRNA Name	miRBase ID	TSS	Score	TSI of Normal tissues	TSI of Cancer tissues	id	More

No results

EnhancerDB

View enhancers around input chromosomal region

Chromosome characteristics of vista28170[chr19:1651371-1651730]

Tissue distribution of vista28170

Transcription factor that possibly regulate vista28170[chr19:1651371-1651730]

SNP sites on vista28170[chr19:1651371-1651730]

Genes possibly regulated by vista28170[chr19:1651371-1651730]

Details of Genes

Expression level of Genes

miRNAs possibly regulated by vista28170[chr19:1651371-1651730]

Details of miRNAs

Expression level of miRNAs