EnhancerDB
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  3. vista28173[chr19:1669192-1669298]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28173[chr19:1669192-1669298]
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Tissue distribution of vista28173
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Transcription factor that possibly regulate vista28173[chr19:1669192-1669298]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 1668500 1669487 POLR2A UCSC Txn Factor no Conserved 108354592
chr19 1669065 1669375 POU2F2 UCSC Txn Factor no Conserved 108354606
chr19 1669224 1669238 SPI1 JASPAR yes 70780705
chr19 1669224 1669238 SPI1 JASPAR yes 112022738
chr19 1669230 1669243 POU2F2 JASPAR yes 70780706
chr19 1669230 1669243 POU2F2 JASPAR yes 112022739
chr19 1669230 1669244 POU1F1 JASPAR yes 70780707
chr19 1669230 1669244 POU1F1 JASPAR yes 112022740
chr19 1669231 1669240 POU2F1 TRANSFAC yes 70780708
chr19 1669231 1669240 POU2F1 TRANSFAC yes 112022741
chr19 1669231 1669243 POU3F1 JASPAR yes 70780709
chr19 1669231 1669243 POU3F2 JASPAR yes 70780710
chr19 1669231 1669243 POU3F1 JASPAR yes 112022742
chr19 1669231 1669243 POU3F2 JASPAR yes 112022743
chr19 1669231 1669244 POU3F3 JASPAR yes 70780711
chr19 1669231 1669244 POU3F3 JASPAR yes 112022744
chr19 1669232 1669244 POU2F1 JASPAR yes 70780712
chr19 1669232 1669244 POU2F1 JASPAR yes 112022745
chr19 1669233 1669240 POU2F1 TRANSFAC yes 70780713
chr19 1669233 1669240 POU2F2C TRANSFAC yes 70780714
chr19 1669233 1669240 POU2F2 TRANSFAC yes 70780715
chr19 1669233 1669240 POU2F1 TRANSFAC yes 112022746
chr19 1669233 1669240 POU2F2C TRANSFAC yes 112022747
chr19 1669233 1669240 POU2F2 TRANSFAC yes 112022748
chr19 1669233 1669241 POU2F1 TRANSFAC yes 70780716
chr19 1669233 1669241 POU2F1 TRANSFAC yes 112022749
chr19 1669233 1669242 POU3F4 JASPAR yes 70780717
chr19 1669233 1669242 POU5F1B JASPAR yes 70780718
chr19 1669233 1669242 POU3F4 JASPAR yes 112022750
chr19 1669233 1669242 POU5F1B JASPAR yes 112022751
chr19 1669233 1669247 IRF7 JASPAR yes 70780719
chr19 1669233 1669247 IRF7 JASPAR yes 112022752
chr19 1669238 1669242 YY1 TRANSFAC yes 70780720
chr19 1669238 1669242 YY1 TRANSFAC yes 112022753
chr19 1669238 1669251 POU2F2 JASPAR yes 70780721
chr19 1669238 1669251 POU2F2 JASPAR yes 112022754
chr19 1669238 1669252 POU1F1 JASPAR yes 70780722
chr19 1669238 1669252 POU1F1 JASPAR yes 112022755
chr19 1669239 1669251 POU3F1 JASPAR yes 70780723
chr19 1669239 1669251 POU3F2 JASPAR yes 70780724
chr19 1669239 1669251 POU3F1 JASPAR yes 112022756
chr19 1669239 1669251 POU3F2 JASPAR yes 112022757
chr19 1669239 1669252 POU3F3 JASPAR yes 70780725
chr19 1669239 1669252 POU3F3 JASPAR yes 112022758
chr19 1669240 1669252 POU2F1 JASPAR yes 70780726
chr19 1669240 1669252 POU2F1 JASPAR yes 112022759
chr19 1669241 1669250 POU3F4 JASPAR yes 70780727
chr19 1669241 1669250 POU5F1B JASPAR yes 70780728
chr19 1669241 1669250 POU3F4 JASPAR yes 112022760
chr19 1669241 1669250 POU5F1B JASPAR yes 112022761
chr19 1669248 1669258 HOXC10 JASPAR yes 70780729
chr19 1669248 1669258 HOXD11 JASPAR yes 70780730
chr19 1669248 1669258 HOXC10 JASPAR yes 112022762
chr19 1669248 1669258 HOXD11 JASPAR yes 112022763
chr19 1669250 1669258 NKX6-1 JASPAR yes 70780731
chr19 1669250 1669258 NKX6-1 JASPAR yes 112022764
chr19 1669253 1669261 MEIS2 JASPAR yes 70780732
chr19 1669253 1669261 MEIS3 JASPAR yes 70780733
chr19 1669253 1669261 MEIS2 JASPAR yes 112022765
chr19 1669253 1669261 MEIS3 JASPAR yes 112022766
chr19 1669265 1669280 MEF2A JASPAR yes 70780734
chr19 1669265 1669280 MEF2A JASPAR yes 112022767
chr19 1669266 1669281 MEF2C JASPAR yes 70780735
chr19 1669266 1669281 MEF2C JASPAR yes 112022768
chr19 1669267 1669279 MEF2A JASPAR yes 70780736
chr19 1669267 1669279 MEF2B JASPAR yes 70780737
chr19 1669267 1669279 MEF2D JASPAR yes 70780738
chr19 1669267 1669279 MEF2A JASPAR yes 112022769
chr19 1669267 1669279 MEF2B JASPAR yes 112022770
chr19 1669267 1669279 MEF2D JASPAR yes 112022771
chr19 1669272 1669282 NFIA JASPAR yes 70780739
chr19 1669272 1669282 NFIA JASPAR yes 112022772
chr19 1669273 1669282 NFIX JASPAR yes 70780740
chr19 1669273 1669282 NFIX JASPAR yes 112022773
chr19 1669274 1669280 NFIC JASPAR yes 70780741
chr19 1669274 1669280 NFIC JASPAR yes 112022774
chr19 1669275 1669286 USF2 JASPAR yes 70780742
chr19 1669275 1669286 USF2 JASPAR yes 112022775
chr19 1669276 1669286 TFEB JASPAR yes 70780743
chr19 1669276 1669286 TFEC JASPAR yes 70780744
chr19 1669276 1669286 TFEB JASPAR yes 112022776
chr19 1669276 1669286 TFEC JASPAR yes 112022777
SNP sites on vista28173[chr19:1669192-1669298]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 1669203 rs111570299 T C
POLR2A POU2F2
5377501
chr19 1669247 rs148798383 C T
IRF7 POLR2A POU1F1 POU2F1 POU2F2 POU3F1 POU3F2 POU3F3 POU3F4 POU5F1B
5377502
Genes possibly regulated by vista28173[chr19:1669192-1669298]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 1576639 1592882 - MBD3 ENSG00000071655.13 1592882 0.54 0.99 16756 23690
chr19 1578338 1605444 - UQCR11 ENSG00000267059.2 1605444 0.96 0.96 16757 36252
chr19 1597171 1605480 - UQCR11 ENSG00000127540.7 1605480 0.87 0.98 16758 36288
chr19 1609291 1652604 - TCF3 ENSG00000071564.10 1652604 0.84 1.0 16759 83412
chr19 1752372 1780987 + ONECUT3 ENSG00000205922.4 1752372 0.88 1.0 16760 16926
Expression level of Genes
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miRNAs possibly regulated by vista28173[chr19:1669192-1669298]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results