EnhancerDB
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  3. vista28174[chr19:1672372-1672532]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28174[chr19:1672372-1672532]
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Tissue distribution of vista28174
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Transcription factor that possibly regulate vista28174[chr19:1672372-1672532]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 1671908 1672614 ZBTB7A UCSC Txn Factor no Conserved 108354704
chr19 1672009 1672643 CTCF UCSC Txn Factor no Conserved 108354718
chr19 1672287 1672723 MAX UCSC Txn Factor no Conserved 108354760
chr19 1672325 1672674 MYC UCSC Txn Factor no Conserved 108354777
chr19 1672338 1672608 SMC3 UCSC Txn Factor no Conserved 108354782
chr19 1672352 1672682 BHLHE40 UCSC Txn Factor no Conserved 108354792
chr19 1672354 1672662 E2F6 UCSC Txn Factor no Conserved 108354796
chr19 1672358 1672622 RAD21 UCSC Txn Factor no Conserved 108354797
chr19 1672381 1672391 SP1 JASPAR yes 70780745
chr19 1672381 1672391 SP1 JASPAR yes 112023689
chr19 1672398 1672415 PAX1 JASPAR yes 70780746
chr19 1672398 1672415 PAX1 JASPAR yes 112023690
chr19 1672405 1672417 CREB1 JASPAR yes 70780747
chr19 1672405 1672417 CREB1 JASPAR yes 112023691
chr19 1672412 1672417 SP1 TRANSFAC yes 70780748
chr19 1672412 1672417 SP1 TRANSFAC yes 112023692
chr19 1672428 1672436 TBX15 JASPAR yes 70780749
chr19 1672428 1672436 TBX15 JASPAR yes 112023693
chr19 1672429 1672434 SP1 TRANSFAC yes 70780750
chr19 1672429 1672434 SP1 TRANSFAC yes 112023694
chr19 1672440 1672454 GLIS2 JASPAR yes 70780751
chr19 1672440 1672454 GLIS3 JASPAR yes 70780752
chr19 1672440 1672454 GLIS2 JASPAR yes 112023695
chr19 1672440 1672454 GLIS3 JASPAR yes 112023696
chr19 1672474 1672486 ZBTB7A JASPAR yes 70780753
chr19 1672474 1672486 ZBTB7A JASPAR yes 112023697
chr19 1672507 1672516 TFAP2A JASPAR yes 70780754
chr19 1672507 1672516 TFAP2A JASPAR yes 112023698
chr19 1672518 1672524 MZF1 JASPAR yes 70780755
chr19 1672518 1672524 MZF1 JASPAR yes 112023699
chr19 1672520 1672530 HEY1 JASPAR yes 70780756
chr19 1672520 1672530 MAX JASPAR yes 70780757
chr19 1672520 1672530 HEY1 JASPAR yes 112023700
chr19 1672520 1672530 MAX JASPAR yes 112023701
chr19 1672521 1672528 USF1 JASPAR yes 70780758
chr19 1672521 1672528 USF1 JASPAR yes 112023702
chr19 1672521 1672533 HINFP JASPAR yes 70780759
chr19 1672521 1672533 HINFP JASPAR yes 112023703
chr19 1672522 1672527 MYC TRANSFAC yes 70780760
chr19 1672522 1672527 USF1 TRANSFAC yes 70780761
chr19 1672522 1672527 USF2 TRANSFAC yes 70780762
chr19 1672522 1672527 MYC TRANSFAC yes 112023704
chr19 1672522 1672527 USF1 TRANSFAC yes 112023705
chr19 1672522 1672527 USF2 TRANSFAC yes 112023706
SNP sites on vista28174[chr19:1672372-1672532]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 1672398 rs149861040 T G
BHLHE40 CTCF E2F6 MAX MYC PAX1 RAD21 SMC3 ZBTB7A
5377562
chr19 1672414 rs78522575 C T
BHLHE40 CREB1 CTCF E2F6 MAX MYC PAX1 RAD21 SMC3 SP1 ZBTB7A
5377563
chr19 1672484 rs144829551 C T
BHLHE40 CTCF E2F6 MAX MYC RAD21 SMC3 ZBTB7A
5377564
Genes possibly regulated by vista28174[chr19:1672372-1672532]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 1576639 1592882 - MBD3 ENSG00000071655.13 1592882 0.54 0.99 16756 20510
chr19 1578338 1605444 - UQCR11 ENSG00000267059.2 1605444 0.96 0.96 16757 33072
chr19 1597171 1605480 - UQCR11 ENSG00000127540.7 1605480 0.87 0.98 16758 33108
chr19 1609291 1652604 - TCF3 ENSG00000071564.10 1652604 0.84 1.0 16759 80232
chr19 1752372 1780987 + ONECUT3 ENSG00000205922.4 1752372 0.88 1.0 16760 20160
Expression level of Genes
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miRNAs possibly regulated by vista28174[chr19:1672372-1672532]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results