EnhancerDB
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  3. vista28176[chr19:1747200-1747550]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28176[chr19:1747200-1747550]
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Tissue distribution of vista28176
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Transcription factor that possibly regulate vista28176[chr19:1747200-1747550]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 1746872 1748650 POLR2A UCSC Txn Factor no Conserved 108355018
chr19 1747342 1747874 JUND UCSC Txn Factor no Conserved 108355104
chr19 1747200 1747205 TFAP2A TRANSFAC yes 70780793
chr19 1747200 1747205 TFAP2A TRANSFAC yes 112027640
chr19 1747200 1747206 MZF1 JASPAR yes 70780794
chr19 1747200 1747206 MZF1 JASPAR yes 112027641
chr19 1747201 1747211 SP1 JASPAR yes 70780795
chr19 1747201 1747211 SP1 JASPAR yes 112027642
chr19 1747201 1747222 ZNF263 JASPAR yes 70780796
chr19 1747201 1747222 ZNF263 JASPAR yes 112027643
chr19 1747208 1747212 LFA1 TRANSFAC yes 70780797
chr19 1747208 1747212 LFA1 TRANSFAC yes 112027644
chr19 1747215 1747221 GATA3 JASPAR yes 70780798
chr19 1747215 1747221 GATA3 JASPAR yes 112027645
chr19 1747232 1747250 NR3C1 JASPAR yes 70780799
chr19 1747232 1747250 NR3C1 JASPAR yes 112027646
chr19 1747239 1747249 MZF1 JASPAR yes 70780800
chr19 1747239 1747249 MZF1 JASPAR yes 112027647
chr19 1747242 1747248 SP1 TRANSFAC yes 70780801
chr19 1747242 1747248 SP1 TRANSFAC yes 112027648
chr19 1747242 1747252 SP1 JASPAR yes 70780802
chr19 1747242 1747252 SP1 JASPAR yes 112027649
chr19 1747243 1747258 TFAP2A JASPAR yes 70780803
chr19 1747243 1747258 TFAP2C JASPAR yes 70780804
chr19 1747243 1747258 TFAP2A JASPAR yes 112027650
chr19 1747243 1747258 TFAP2C JASPAR yes 112027651
chr19 1747245 1747259 EBF1 JASPAR yes 70780805
chr19 1747245 1747259 EBF1 JASPAR yes 112027652
chr19 1747246 1747257 EBF1 JASPAR yes 70780806
chr19 1747246 1747257 EBF1 JASPAR yes 112027653
chr19 1747269 1747279 SP1 JASPAR yes 70780807
chr19 1747269 1747279 SP1 JASPAR yes 112027654
chr19 1747286 1747296 GABPA JASPAR yes 70780808
chr19 1747286 1747296 GABPA JASPAR yes 112027655
chr19 1747288 1747294 ETS1 JASPAR yes 70780809
chr19 1747288 1747294 SPI1 JASPAR yes 70780810
chr19 1747288 1747294 ETS1 JASPAR yes 112027656
chr19 1747288 1747294 SPI1 JASPAR yes 112027657
chr19 1747304 1747309 MYB TRANSFAC yes 70780811
chr19 1747304 1747309 MYB TRANSFAC yes 112027658
chr19 1747307 1747316 SOX9 JASPAR yes 70780812
chr19 1747307 1747316 SOX9 JASPAR yes 112027659
chr19 1747338 1747352 JUN JASPAR yes 70780813
chr19 1747341 1747352 FOSL2 JASPAR yes 70780814
chr19 1747341 1747352 JUNB JASPAR yes 70780815
chr19 1747341 1747354 NFKB1 JASPAR yes 70780816
chr19 1747342 1747353 FOS JASPAR yes 70780817
chr19 1747342 1747353 FOSL1 JASPAR yes 70780818
chr19 1747342 1747353 JUND JASPAR yes 70780819
chr19 1747342 1747353 NFE2 JASPAR yes 70780820
chr19 1747343 1747350 JUN TRANSFAC yes 70780821
chr19 1747343 1747352 JDP2 JASPAR yes 70780822
chr19 1747343 1747354 FOSL2 JASPAR yes 70780823
chr19 1747343 1747354 JUNB JASPAR yes 70780824
chr19 1747343 1747357 JUN JASPAR yes 70780825
chr19 1747346 1747355 ZEB1 JASPAR yes 70780826
chr19 1747349 1747354 USF2 TRANSFAC yes 70780827
chr19 1747356 1747370 TLX1 JASPAR yes 70780828
chr19 1747366 1747372 SOX10 JASPAR yes 70780829
chr19 1747372 1747384 INSM1 JASPAR yes 70780830
chr19 1747373 1747387 PLAG1 JASPAR yes 70780831
chr19 1747373 1747388 RFX5 JASPAR yes 70780832
chr19 1747374 1747394 RREB1 JASPAR yes 70780833
chr19 1747381 1747401 RREB1 JASPAR yes 70780834
chr19 1747382 1747403 ZNF263 JASPAR yes 70780835
chr19 1747384 1747404 RREB1 JASPAR yes 70780836
chr19 1747385 1747391 MZF1 JASPAR yes 70780837
chr19 1747385 1747406 ZNF263 JASPAR yes 70780838
chr19 1747388 1747408 RREB1 JASPAR yes 70780839
chr19 1747391 1747396 SP1 TRANSFAC yes 70780840
chr19 1747391 1747411 RREB1 JASPAR yes 70780841
chr19 1747394 1747414 RREB1 JASPAR yes 70780842
chr19 1747398 1747418 RREB1 JASPAR yes 70780843
chr19 1747399 1747409 ZNF740 JASPAR yes 70780844
chr19 1747399 1747413 GLIS2 JASPAR yes 70780845
chr19 1747399 1747413 GLIS3 JASPAR yes 70780846
chr19 1747399 1747413 ZIC1 JASPAR yes 70780847
chr19 1747399 1747414 ZIC3 JASPAR yes 70780848
chr19 1747399 1747414 ZIC4 JASPAR yes 70780849
chr19 1747401 1747421 RREB1 JASPAR yes 70780850
chr19 1747408 1747413 SP1 TRANSFAC yes 70780851
chr19 1747408 1747428 RREB1 JASPAR yes 70780852
chr19 1747411 1747426 RUNX2 JASPAR yes 70780853
chr19 1747412 1747432 RREB1 JASPAR yes 70780854
chr19 1747414 1747434 RREB1 JASPAR yes 70780855
chr19 1747416 1747436 RREB1 JASPAR yes 70780856
chr19 1747418 1747438 RREB1 JASPAR yes 70780857
chr19 1747422 1747442 RREB1 JASPAR yes 70780858
chr19 1747463 1747473 SP1 JASPAR yes 70780859
chr19 1747467 1747481 JUN JASPAR yes 70780860
chr19 1747470 1747481 FOSL2 JASPAR yes 70780861
chr19 1747470 1747481 JUNB JASPAR yes 70780862
chr19 1747471 1747482 FOS JASPAR yes 70780863
chr19 1747471 1747482 FOSL1 JASPAR yes 70780864
chr19 1747471 1747482 JUND JASPAR yes 70780865
chr19 1747471 1747482 NFE2 JASPAR yes 70780866
chr19 1747472 1747481 JDP2 JASPAR yes 70780867
chr19 1747472 1747483 FOSL2 JASPAR yes 70780868
chr19 1747472 1747483 JUNB JASPAR yes 70780869
chr19 1747472 1747486 JUN JASPAR yes 70780870
chr19 1747473 1747484 BATF JASPAR yes 70780871
chr19 1747490 1747503 ZBTB18 JASPAR yes 70780872
chr19 1747500 1747506 YY1 JASPAR yes 70780873
chr19 1747522 1747525 MYB TRANSFAC yes 70780874
chr19 1747532 1747537 SP1 TRANSFAC yes 70780875
chr19 1747533 1747543 ZNF740 JASPAR yes 70780876
chr19 1747537 1747547 GSC2 JASPAR yes 70780877
chr19 1747538 1747546 RHOXF1 JASPAR yes 70780878
SNP sites on vista28176[chr19:1747200-1747550]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 1747208 rs147517392 G A
LFA1 POLR2A SP1 ZNF263
5378016
chr19 1747284 rs62130136 G A
POLR2A
5378017
chr19 1747439 rs58958659 T C
JUND POLR2A RREB1
5378018
chr19 1747451 rs60624655 C T
JUND POLR2A
5378019
chr19 1747452 rs543957429 A C
JUND POLR2A
5378020
chr19 1747503 rs114182669 T C
JUND POLR2A YY1 ZBTB18
5378021
chr19 1747511 rs547155647 C T
JUND POLR2A
5378022
Genes possibly regulated by vista28176[chr19:1747200-1747550]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 1609291 1652604 - TCF3 ENSG00000071564.10 1652604 0.84 1.0 16759 5404
chr19 1752372 1780987 + ONECUT3 ENSG00000205922.4 1752372 0.88 1.0 16760 95178
chr19 1782074 1812275 - ATP8B3 ENSG00000130270.12 1812275 0.94 1.0 16761 35275
Expression level of Genes
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miRNAs possibly regulated by vista28176[chr19:1747200-1747550]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results