EnhancerDB
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  3. vista28179[chr19:1840916-1841078]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28179[chr19:1840916-1841078]
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Tissue distribution of vista28179
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Transcription factor that possibly regulate vista28179[chr19:1840916-1841078]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 1840914 1840923 H4TF2 TRANSFAC yes 70781030
chr19 1840914 1840923 H4TF2 TRANSFAC yes 112031753
chr19 1840916 1840937 ZNF263 JASPAR yes 70781031
chr19 1840916 1840937 ZNF263 JASPAR yes 112031754
chr19 1840918 1840930 INSM1 JASPAR yes 70781032
chr19 1840918 1840930 INSM1 JASPAR yes 112031755
chr19 1840919 1840933 PLAG1 JASPAR yes 70781033
chr19 1840919 1840933 PLAG1 JASPAR yes 112031756
chr19 1840920 1840940 RREB1 JASPAR yes 70781034
chr19 1840920 1840940 RREB1 JASPAR yes 112031757
chr19 1840934 1840949 TFAP2C JASPAR yes 70781035
chr19 1840934 1840949 TFAP2C JASPAR yes 112031758
chr19 1840940 1840953 ELF1 JASPAR yes 70781036
chr19 1840940 1840953 ELF1 JASPAR yes 112031759
chr19 1840941 1840951 ELK1 JASPAR yes 70781037
chr19 1840941 1840951 ELK1 JASPAR yes 112031760
chr19 1840941 1840953 ELF1 JASPAR yes 70781038
chr19 1840941 1840953 ELF1 JASPAR yes 112031761
chr19 1840943 1840952 ELK4 JASPAR yes 70781039
chr19 1840943 1840952 ELK4 JASPAR yes 112031762
chr19 1840943 1840953 ELK1 JASPAR yes 70781040
chr19 1840943 1840953 ELK3 JASPAR yes 70781041
chr19 1840943 1840953 ERF JASPAR yes 70781042
chr19 1840943 1840953 ERG JASPAR yes 70781043
chr19 1840943 1840953 ETS1 JASPAR yes 70781044
chr19 1840943 1840953 ETV1 JASPAR yes 70781045
chr19 1840943 1840953 ETV4 JASPAR yes 70781046
chr19 1840943 1840953 ETV5 JASPAR yes 70781047
chr19 1840943 1840953 FEV JASPAR yes 70781048
chr19 1840943 1840953 FLI1 JASPAR yes 70781049
chr19 1840943 1840953 ELK1 JASPAR yes 112031763
chr19 1840943 1840953 ELK3 JASPAR yes 112031764
chr19 1840943 1840953 ERF JASPAR yes 112031765
chr19 1840943 1840953 ERG JASPAR yes 112031766
chr19 1840943 1840953 ETS1 JASPAR yes 112031767
chr19 1840943 1840953 ETV1 JASPAR yes 112031768
chr19 1840943 1840953 ETV4 JASPAR yes 112031769
chr19 1840943 1840953 ETV5 JASPAR yes 112031770
chr19 1840943 1840953 FEV JASPAR yes 112031771
chr19 1840943 1840953 FLI1 JASPAR yes 112031772
chr19 1840943 1840954 ELK4 JASPAR yes 70781050
chr19 1840943 1840954 FLI1 JASPAR yes 70781051
chr19 1840943 1840954 ELK4 JASPAR yes 112031773
chr19 1840943 1840954 FLI1 JASPAR yes 112031774
chr19 1840943 1840964 REST JASPAR yes 70781052
chr19 1840943 1840964 REST JASPAR yes 112031775
chr19 1840945 1840951 ETS1 JASPAR yes 70781053
chr19 1840945 1840951 SPI1 JASPAR yes 70781054
chr19 1840945 1840951 ETS1 JASPAR yes 112031776
chr19 1840945 1840951 SPI1 JASPAR yes 112031777
chr19 1840946 1840966 TP53 JASPAR yes 70781055
chr19 1840946 1840966 TP53 JASPAR yes 112031778
chr19 1840954 1840958 LFA1 TRANSFAC yes 70781056
chr19 1840954 1840958 LFA1 TRANSFAC yes 112031779
chr19 1840959 1840963 H4TF2 TRANSFAC yes 70781057
chr19 1840959 1840963 H4TF2 TRANSFAC yes 112031780
chr19 1840971 1840986 TFAP2C JASPAR yes 70781058
chr19 1840971 1840986 TFAP2C JASPAR yes 112031781
chr19 1840990 1840998 MEIS2 JASPAR yes 70781059
chr19 1840990 1840998 MEIS3 JASPAR yes 70781060
chr19 1840990 1840998 MEIS2 JASPAR yes 112031782
chr19 1840990 1840998 MEIS3 JASPAR yes 112031783
chr19 1840991 1840995 NFE TRANSFAC yes 70781061
chr19 1840991 1840995 NFE TRANSFAC yes 112031784
chr19 1841010 1841029 REST JASPAR yes 70781062
chr19 1841010 1841029 REST JASPAR yes 112031785
chr19 1841025 1841040 STAT1 JASPAR yes 70781063
chr19 1841025 1841040 STAT1 JASPAR yes 112031786
chr19 1841046 1841057 TFAP2B JASPAR yes 70781064
chr19 1841046 1841057 TFAP2C JASPAR yes 70781065
chr19 1841046 1841057 TFAP2B JASPAR yes 112031787
chr19 1841046 1841057 TFAP2C JASPAR yes 112031788
chr19 1841053 1841059 MAZ TRANSFAC yes 70781066
chr19 1841053 1841059 MAZ TRANSFAC yes 112031789
SNP sites on vista28179[chr19:1840916-1841078]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 1840922 rs116160620 C T
H4TF2 INSM1 PLAG1 RREB1 ZNF263
5378720
chr19 1840956 rs150713434 G A
LFA1 REST TP53
5378721
chr19 1841000 rs548377487 G A no 5378722
chr19 1841001 rs28575222 G A no 5378723
chr19 1841069 rs532319192 G A no 5378724
Genes possibly regulated by vista28179[chr19:1840916-1841078]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 1752372 1780987 + ONECUT3 ENSG00000205922.4 1752372 0.88 1.0 16760 11456
chr19 1782074 1812275 - ATP8B3 ENSG00000130270.12 1812275 0.94 1.0 16761 71359
chr19 1815248 1848452 - REXO1 ENSG00000079313.7 1848452 0.66 1.0 16762 92626
chr19 1852399 1863567 - KLF16 ENSG00000129911.4 1863567 0.7 1.0 16763 77511
chr19 1876809 1885546 - ABHD17A ENSG00000129968.11 1885546 0.62 1.0 16764 55532
chr19 1905213 1926016 + SCAMP4 ENSG00000227500.5 1905213 0.75 1.0 16765 35865
chr19 1905377 1913444 + ADAT3 ENSG00000213638.4 1905377 0.61 1.0 16766 35701
Expression level of Genes
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miRNAs possibly regulated by vista28179[chr19:1840916-1841078]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr19 1816168 1816189 - hsa-miR-1909-3p MIMAT0007883 1848480 0.0018744142455482662 0.83523 0.0 798
Expression level of miRNAs
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