EnhancerDB
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  3. vista2818[chr1:108695322-108695861]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2818[chr1:108695322-108695861]
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Tissue distribution of vista2818
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Transcription factor that possibly regulate vista2818[chr1:108695322-108695861]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 108695330 108695334 NFE TRANSFAC yes 118345302
chr1 108695330 108695345 FOXP1 JASPAR yes 118345303
chr1 108695337 108695351 POU1F1 JASPAR yes 118345304
chr1 108695338 108695350 POU3F2 JASPAR yes 118345305
chr1 108695338 108695351 POU3F3 JASPAR yes 118345306
chr1 108695339 108695343 YY1 TRANSFAC yes 118345307
chr1 108695340 108695358 SRF JASPAR yes 118345308
chr1 108695342 108695349 NKX3-1 JASPAR yes 118345309
chr1 108695345 108695357 SRF JASPAR yes 118345310
chr1 108695354 108695369 STAT1 JASPAR yes 118345311
chr1 108695356 108695367 STAT1 JASPAR yes 118345312
chr1 108695356 108695367 STAT3 JASPAR yes 118345313
chr1 108695361 108695375 TLX1 JASPAR yes 118345314
chr1 108695362 108695383 REST JASPAR yes 118345315
chr1 108695363 108695382 REST JASPAR yes 118345316
chr1 108695368 108695372 LFA1 TRANSFAC yes 118345317
chr1 108695372 108695382 TBX21 JASPAR yes 118345318
chr1 108695372 108695383 TBX2 JASPAR yes 118345319
chr1 108695372 108695385 EOMES JASPAR yes 118345320
chr1 108695375 108695390 MEF2C JASPAR yes 118345321
chr1 108695376 108695391 MEF2A JASPAR yes 118345322
chr1 108695377 108695389 MEF2B JASPAR yes 118345323
chr1 108695403 108695408 ETS2 TRANSFAC yes 118345324
chr1 108695421 108695427 SOX10 JASPAR yes 118345325
chr1 108695431 108695438 NKX3-1 JASPAR yes 118345326
chr1 108695443 108695448 ATF1 TRANSFAC yes 118345327
chr1 108695449 108695470 IRF1 JASPAR yes 118345328
chr1 108695470 108695473 MYB TRANSFAC yes 118345329
chr1 108695472 108695486 STAT1 JASPAR yes 118345330
chr1 108695472 108695487 STAT2 JASPAR yes 118345331
chr1 108695474 108695495 IRF1 JASPAR yes 118345332
chr1 108695476 108695481 ETS2 TRANSFAC yes 118345333
chr1 108695478 108695493 STAT2 JASPAR yes 118345334
chr1 108695496 108695510 EBF1 JASPAR yes 118345335
chr1 108695502 108695509 SPIB JASPAR yes 118345336
chr1 108695510 108695513 MYB TRANSFAC yes 118345337
chr1 108695517 108695523 JUN TRANSFAC yes 118345338
chr1 108695521 108695528 NKX3-1 JASPAR yes 118345339
chr1 108695531 108695544 NFKB1 JASPAR yes 118345340
chr1 108695531 108695544 NFKB2 JASPAR yes 118345341
chr1 108695532 108695536 LFA1 TRANSFAC yes 118345342
chr1 108695532 108695542 REL JASPAR yes 118345343
chr1 108695532 108695543 NFKB1 JASPAR yes 118345344
chr1 108695535 108695539 YY1 TRANSFAC yes 118345345
chr1 108695536 108695550 E2F7 JASPAR yes 118345346
chr1 108695537 108695549 E2F8 JASPAR yes 118345347
chr1 108695553 108695574 IRF1 JASPAR yes 118345348
chr1 108695557 108695571 SPI1 JASPAR yes 118345349
chr1 108695557 108695571 SPIC JASPAR yes 118345350
chr1 108695558 108695571 ELF1 JASPAR yes 118345351
chr1 108695561 108695568 SPIB JASPAR yes 118345352
chr1 108695562 108695570 EHF JASPAR yes 118345353
chr1 108695570 108695591 REST JASPAR yes 118345354
chr1 108695571 108695590 REST JASPAR yes 118345355
chr1 108695574 108695578 NFE TRANSFAC yes 118345356
chr1 108695591 108695604 NR2F1 JASPAR yes 118345357
chr1 108695595 108695599 ESR1 TRANSFAC yes 118345358
chr1 108695616 108695636 TP53 JASPAR yes 118345359
chr1 108695622 108695633 NFE2L2 JASPAR yes 118345360
chr1 108695626 108695642 ZNF143 JASPAR yes 118345361
chr1 108695635 108695647 YY1 JASPAR yes 118345362
chr1 108695662 108695668 ESR1 TRANSFAC yes 118345363
chr1 108695664 108695668 ESR1 TRANSFAC yes 118345364
chr1 108695686 108695692 HiNF-A TRANSFAC yes 118345365
chr1 108695687 108695703 ZNF143 JASPAR yes 118345366
chr1 108695691 108695706 FOXA1 JASPAR yes 118345367
chr1 108695718 108695732 GATA2 JASPAR yes 118345368
chr1 108695720 108695728 GATA3 JASPAR yes 118345369
chr1 108695722 108695736 SPI1 JASPAR yes 118345370
chr1 108695722 108695736 SPIC JASPAR yes 118345371
chr1 108695726 108695733 SPIB JASPAR yes 118345372
chr1 108695726 108695747 ZNF263 JASPAR yes 118345373
chr1 108695745 108695763 NR3C1 JASPAR yes 118345374
chr1 108695760 108695772 YY1 JASPAR yes 118345375
chr1 108695763 108695769 YY1 JASPAR yes 118345376
chr1 108695765 108695777 PKNOX2 JASPAR yes 118345377
chr1 108695773 108695788 RUNX2 JASPAR yes 118345378
chr1 108695774 108695783 RUNX2 JASPAR yes 118345379
chr1 108695774 108695784 RUNX3 JASPAR yes 118345380
chr1 108695774 108695785 RUNX1 JASPAR yes 118345381
chr1 108695787 108695804 ZNF410 JASPAR yes 118345382
chr1 108695789 108695803 GLIS3 JASPAR yes 118345383
chr1 108695802 108695818 SOX4 JASPAR yes 118345384
chr1 108695806 108695810 NFE TRANSFAC yes 118345385
chr1 108695806 108695813 MEIS1 JASPAR yes 118345386
chr1 108695808 108695823 JUND JASPAR yes 118345387
chr1 108695811 108695822 DMRT3 JASPAR yes 118345388
chr1 108695811 108695829 ESR2 JASPAR yes 118345389
chr1 108695824 108695840 RFX5 JASPAR yes 118345390
chr1 108695828 108695840 POU2F1 JASPAR yes 118345391
chr1 108695828 108695841 POU3F3 JASPAR yes 118345392
chr1 108695828 108695842 POU1F1 JASPAR yes 118345393
chr1 108695829 108695841 POU3F1 JASPAR yes 118345394
chr1 108695829 108695841 POU3F2 JASPAR yes 118345395
chr1 108695830 108695839 POU3F4 JASPAR yes 118345396
chr1 108695830 108695839 POU5F1B JASPAR yes 118345397
chr1 108695839 108695854 ZIC4 JASPAR yes 118345398
chr1 108695841 108695856 RUNX2 JASPAR yes 118345399
SNP sites on vista2818[chr1:108695322-108695861]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 108695341 rs138284459 A ATTT
FOXP1 POU1F1 POU3F2 POU3F3 SRF YY1
541840
chr1 108695398 rs555584381 C G no 541841
chr1 108695487 rs183330485 G C
IRF1 STAT2
541842
chr1 108695513 rs375935490 AC A
MYB
541843
chr1 108695533 rs11584525 G C
LFA1 NFKB1 NFKB2 REL
541844
chr1 108695540 rs6663170 T C
E2F7 E2F8 NFKB1 NFKB2 REL
541845
chr1 108695557 rs188789175 T C
IRF1 SPI1 SPIC
541846
chr1 108695669 rs74677427 A T no 541847
chr1 108695802 rs1020172 T C
GLIS3 SOX4 ZNF410
541848
chr1 108695853 rs78450241 G A
RUNX2 ZIC4
541849
Genes possibly regulated by vista2818[chr1:108695322-108695861]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 108676658 108743471 - SLC25A24 ENSG00000085491.11 108743471 0.74 0.99 955 52390
chr1 108765963 108786689 - NBPF4 ENSG00000196427.9 108786689 0.96 0.94 956 9172
Expression level of Genes
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miRNAs possibly regulated by vista2818[chr1:108695322-108695861]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results