EnhancerDB
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  3. vista28180[chr19:1855247-1855761]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28180[chr19:1855247-1855761]
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Tissue distribution of vista28180
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Transcription factor that possibly regulate vista28180[chr19:1855247-1855761]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 1854477 1856304 POLR2A UCSC Txn Factor no Conserved 108355265
chr19 1855245 1855259 GLIS3 JASPAR yes 70781067
chr19 1855245 1855259 GLIS3 JASPAR yes 112032760
chr19 1855246 1855256 FIGLA JASPAR yes 70781068
chr19 1855246 1855256 TCF3 JASPAR yes 70781069
chr19 1855246 1855256 FIGLA JASPAR yes 112032761
chr19 1855246 1855256 TCF3 JASPAR yes 112032762
chr19 1855248 1855253 USF2 TRANSFAC yes 70781070
chr19 1855248 1855253 USF2 TRANSFAC yes 112032763
chr19 1855257 1855263 TCF4 TRANSFAC yes 70781071
chr19 1855257 1855263 TCF4 TRANSFAC yes 112032764
chr19 1855269 1855281 INSM1 JASPAR yes 70781072
chr19 1855269 1855281 INSM1 JASPAR yes 112032765
chr19 1855279 1855295 RFX3 JASPAR yes 70781073
chr19 1855279 1855295 RFX4 JASPAR yes 70781074
chr19 1855279 1855295 RFX3 JASPAR yes 112032766
chr19 1855279 1855295 RFX4 JASPAR yes 112032767
chr19 1855280 1855299 RFX2 JASPAR yes 70781075
chr19 1855280 1855299 RFX2 JASPAR yes 112032768
chr19 1855299 1855302 MYB TRANSFAC yes 70781076
chr19 1855299 1855302 MYB TRANSFAC yes 112032769
chr19 1855311 1855317 SP1 TRANSFAC yes 70781077
chr19 1855311 1855317 SP1 TRANSFAC yes 112032770
chr19 1855321 1855333 INSM1 JASPAR yes 70781078
chr19 1855321 1855333 INSM1 JASPAR yes 112032771
chr19 1855326 1855340 PLAG1 JASPAR yes 70781079
chr19 1855326 1855340 PLAG1 JASPAR yes 112032772
chr19 1855328 1855332 LFA1 TRANSFAC yes 70781080
chr19 1855328 1855332 LFA1 TRANSFAC yes 112032773
chr19 1855335 1855341 PEA3 TRANSFAC yes 70781081
chr19 1855335 1855341 PEA3 TRANSFAC yes 112032774
chr19 1855339 1855350 GCM1 JASPAR yes 70781082
chr19 1855339 1855350 GCM1 JASPAR yes 112032775
chr19 1855340 1855352 TFAP2A JASPAR yes 70781083
chr19 1855340 1855352 TFAP2B JASPAR yes 70781084
chr19 1855340 1855352 TFAP2C JASPAR yes 70781085
chr19 1855340 1855352 TFAP2A JASPAR yes 112032776
chr19 1855340 1855352 TFAP2B JASPAR yes 112032777
chr19 1855340 1855352 TFAP2C JASPAR yes 112032778
chr19 1855341 1855352 TFAP2A JASPAR yes 70781086
chr19 1855341 1855352 TFAP2B JASPAR yes 70781087
chr19 1855341 1855352 TFAP2C JASPAR yes 70781088
chr19 1855341 1855352 TFAP2A JASPAR yes 112032779
chr19 1855341 1855352 TFAP2B JASPAR yes 112032780
chr19 1855341 1855352 TFAP2C JASPAR yes 112032781
chr19 1855347 1855362 AR JASPAR yes 70781089
chr19 1855347 1855362 AR JASPAR yes 112032782
chr19 1855373 1855388 RUNX2 JASPAR yes 70781090
chr19 1855373 1855388 RUNX2 JASPAR yes 112032783
chr19 1855387 1855408 ZNF263 JASPAR yes 70781091
chr19 1855387 1855408 ZNF263 JASPAR yes 112032784
chr19 1855414 1855420 MAZ TRANSFAC yes 70781092
chr19 1855414 1855420 MAZ TRANSFAC yes 112032785
chr19 1855415 1855430 NR2C2 JASPAR yes 70781093
chr19 1855415 1855430 NR2C2 JASPAR yes 112032786
chr19 1855417 1855427 SP1 JASPAR yes 70781094
chr19 1855417 1855427 SP1 JASPAR yes 112032787
chr19 1855418 1855428 SP1 JASPAR yes 70781095
chr19 1855418 1855428 SP1 JASPAR yes 112032788
chr19 1855419 1855425 MAZ TRANSFAC yes 70781096
chr19 1855419 1855425 MAZ TRANSFAC yes 112032789
chr19 1855423 1855430 SP1 TRANSFAC yes 70781097
chr19 1855423 1855430 SP1 TRANSFAC yes 112032790
chr19 1855423 1855433 SP1 JASPAR yes 70781098
chr19 1855423 1855433 SP1 JASPAR yes 112032791
chr19 1855424 1855432 SP1 TRANSFAC yes 70781099
chr19 1855424 1855432 SP1 TRANSFAC yes 112032792
chr19 1855424 1855433 SP1 TRANSFAC yes 70781100
chr19 1855424 1855433 SP1 TRANSFAC yes 112032793
chr19 1855424 1855434 SP1 JASPAR yes 70781101
chr19 1855424 1855434 SP1 JASPAR yes 112032794
chr19 1855424 1855444 ESR1 JASPAR yes 70781102
chr19 1855424 1855444 ESR1 JASPAR yes 112032795
chr19 1855425 1855430 SP1 TRANSFAC yes 70781103
chr19 1855425 1855430 SP1 TRANSFAC yes 112032796
chr19 1855426 1855431 SP1 TRANSFAC yes 70781104
chr19 1855426 1855431 SP1 TRANSFAC yes 112032797
chr19 1855426 1855432 SP1 TRANSFAC yes 70781105
chr19 1855426 1855432 SP1 TRANSFAC yes 112032798
chr19 1855428 1855439 NFKB1 JASPAR yes 70781106
chr19 1855428 1855439 NFKB1 JASPAR yes 112032799
chr19 1855432 1855447 STAT1 JASPAR yes 70781107
chr19 1855432 1855447 STAT1 JASPAR yes 112032800
chr19 1855439 1855444 ETS2 TRANSFAC yes 70781108
chr19 1855439 1855444 ETS2 TRANSFAC yes 112032801
chr19 1855443 1855453 SP1 JASPAR yes 70781109
chr19 1855443 1855453 SP1 JASPAR yes 112032802
chr19 1855444 1855452 SP1 TRANSFAC yes 70781110
chr19 1855444 1855452 SP1 TRANSFAC yes 112032803
chr19 1855444 1855453 SP1 TRANSFAC yes 70781111
chr19 1855444 1855453 SP1 TRANSFAC yes 112032804
chr19 1855445 1855450 SP1 TRANSFAC yes 70781112
chr19 1855445 1855450 SP1 TRANSFAC yes 112032805
chr19 1855446 1855451 SP1 TRANSFAC yes 70781113
chr19 1855446 1855451 SP1 TRANSFAC yes 112032806
chr19 1855446 1855452 SP1 TRANSFAC yes 70781114
chr19 1855446 1855452 SP1 TRANSFAC yes 112032807
chr19 1855449 1855454 SP1 TRANSFAC yes 70781115
chr19 1855449 1855454 SP1 TRANSFAC yes 112032808
chr19 1855451 1855464 TFAP2A JASPAR yes 70781116
chr19 1855451 1855464 TFAP2B JASPAR yes 70781117
chr19 1855451 1855464 TFAP2C JASPAR yes 70781118
chr19 1855451 1855464 TFAP2A JASPAR yes 112032809
chr19 1855451 1855464 TFAP2B JASPAR yes 112032810
chr19 1855451 1855464 TFAP2C JASPAR yes 112032811
chr19 1855456 1855461 SP1 TRANSFAC yes 70781119
chr19 1855456 1855461 SP1 TRANSFAC yes 112032812
chr19 1855470 1855479 SP1 TRANSFAC yes 70781120
chr19 1855470 1855479 SP1 TRANSFAC yes 112032813
chr19 1855471 1855481 SP1 JASPAR yes 70781121
chr19 1855471 1855481 SP1 JASPAR yes 112032814
chr19 1855473 1855483 ZNF740 JASPAR yes 70781122
chr19 1855473 1855483 ZNF740 JASPAR yes 112032815
chr19 1855475 1855489 EBF1 JASPAR yes 70781123
chr19 1855475 1855489 EBF1 JASPAR yes 112032816
chr19 1855485 1855495 NEUROG2 JASPAR yes 70781124
chr19 1855485 1855495 NEUROG2 JASPAR yes 112032817
chr19 1855489 1855495 YY1 JASPAR yes 70781125
chr19 1855489 1855495 YY1 JASPAR yes 112032818
chr19 1855497 1855508 NRF1 JASPAR yes 70781126
chr19 1855497 1855508 NRF1 JASPAR yes 112032819
chr19 1855498 1855502 LFA1 TRANSFAC yes 70781127
chr19 1855498 1855502 LFA1 TRANSFAC yes 112032820
chr19 1855503 1855511 SP1 TRANSFAC yes 70781128
chr19 1855503 1855511 SP1 TRANSFAC yes 112032821
chr19 1855504 1855509 SP1 TRANSFAC yes 70781129
chr19 1855504 1855509 SP1 TRANSFAC yes 112032822
chr19 1855505 1855510 SP1 TRANSFAC yes 70781130
chr19 1855505 1855510 SP1 TRANSFAC yes 112032823
chr19 1855522 1855533 ELK4 JASPAR yes 70781131
chr19 1855522 1855533 FLI1 JASPAR yes 70781132
chr19 1855522 1855533 ELK4 JASPAR yes 112032824
chr19 1855522 1855533 FLI1 JASPAR yes 112032825
chr19 1855523 1855533 ETV6 JASPAR yes 70781133
chr19 1855523 1855533 ETV6 JASPAR yes 112032826
chr19 1855523 1855536 ELF1 JASPAR yes 70781134
chr19 1855523 1855536 ELF1 JASPAR yes 112032827
chr19 1855524 1855531 SPI1 JASPAR yes 70781135
chr19 1855524 1855531 SPI1 JASPAR yes 112032828
chr19 1855524 1855532 EHF JASPAR yes 70781136
chr19 1855524 1855532 EHF JASPAR yes 112032829
chr19 1855538 1855544 SP1 TRANSFAC yes 70781137
chr19 1855538 1855544 SP1 TRANSFAC yes 112032830
chr19 1855538 1855548 SP1 JASPAR yes 70781138
chr19 1855538 1855548 ZNF740 JASPAR yes 70781139
chr19 1855538 1855548 SP1 JASPAR yes 112032831
chr19 1855538 1855548 ZNF740 JASPAR yes 112032832
chr19 1855572 1855578 NFE2 TRANSFAC yes 70781140
chr19 1855572 1855578 NFE2 TRANSFAC yes 112032833
chr19 1855579 1855582 MYB TRANSFAC yes 70781141
chr19 1855579 1855582 MYB TRANSFAC yes 112032834
chr19 1855589 1855601 TAL1 JASPAR yes 70781142
chr19 1855589 1855601 TAL1 JASPAR yes 112032835
chr19 1855611 1855623 TFAP2A JASPAR yes 70781143
chr19 1855611 1855623 TFAP2B JASPAR yes 70781144
chr19 1855611 1855623 TFAP2C JASPAR yes 70781145
chr19 1855611 1855623 TFAP2A JASPAR yes 112032836
chr19 1855611 1855623 TFAP2B JASPAR yes 112032837
chr19 1855611 1855623 TFAP2C JASPAR yes 112032838
chr19 1855618 1855623 SP1 TRANSFAC yes 70781146
chr19 1855618 1855623 SP1 TRANSFAC yes 112032839
chr19 1855631 1855637 TCF4 TRANSFAC yes 70781147
chr19 1855631 1855637 TCF4 TRANSFAC yes 112032840
chr19 1855654 1855666 INSM1 JASPAR yes 70781148
chr19 1855654 1855666 INSM1 JASPAR yes 112032841
chr19 1855657 1855668 FLI1 JASPAR yes 70781149
chr19 1855657 1855668 FLI1 JASPAR yes 112032842
chr19 1855659 1855667 EHF JASPAR yes 70781150
chr19 1855659 1855667 EHF JASPAR yes 112032843
chr19 1855661 1855666 ETS2 TRANSFAC yes 70781151
chr19 1855661 1855666 ETS2 TRANSFAC yes 112032844
chr19 1855680 1855685 SP1 TRANSFAC yes 70781152
chr19 1855680 1855685 SP1 TRANSFAC yes 112032845
chr19 1855685 1855699 ZIC1 JASPAR yes 70781153
chr19 1855685 1855699 ZIC1 JASPAR yes 112032846
chr19 1855688 1855699 USF2 JASPAR yes 70781154
chr19 1855688 1855699 USF2 JASPAR yes 112032847
chr19 1855697 1855712 JUND JASPAR yes 70781155
chr19 1855697 1855712 JUND JASPAR yes 112032848
chr19 1855698 1855711 JUN JASPAR yes 70781156
chr19 1855698 1855711 JUN JASPAR yes 112032849
chr19 1855699 1855713 BATF3 JASPAR yes 70781157
chr19 1855699 1855713 BATF3 JASPAR yes 112032850
chr19 1855700 1855712 JDP2 JASPAR yes 70781158
chr19 1855700 1855712 JDP2 JASPAR yes 112032851
chr19 1855704 1855719 ESR2 JASPAR yes 70781159
chr19 1855704 1855719 ESR2 JASPAR yes 112032852
chr19 1855715 1855721 MZF1 JASPAR yes 70781160
chr19 1855715 1855721 MZF1 JASPAR yes 112032853
chr19 1855723 1855729 GATA3 JASPAR yes 70781161
chr19 1855723 1855729 GATA3 JASPAR yes 112032854
chr19 1855743 1855748 TFAP2A TRANSFAC yes 70781162
chr19 1855743 1855748 TFAP2A TRANSFAC yes 112032855
chr19 1855743 1855749 MZF1 JASPAR yes 70781163
chr19 1855743 1855749 MZF1 JASPAR yes 112032856
chr19 1855743 1855753 SP1 JASPAR yes 70781164
chr19 1855743 1855753 SP1 JASPAR yes 112032857
chr19 1855745 1855751 MAZ TRANSFAC yes 70781165
chr19 1855745 1855751 MAZ TRANSFAC yes 112032858
chr19 1855750 1855754 LFA1 TRANSFAC yes 70781166
chr19 1855750 1855754 LFA1 TRANSFAC yes 112032859
chr19 1855754 1855769 ESR2 JASPAR yes 70781167
chr19 1855754 1855769 ESR2 JASPAR yes 112032860
chr19 1855755 1855759 ESR1 TRANSFAC yes 70781168
chr19 1855755 1855759 ESR1 TRANSFAC yes 112032861
SNP sites on vista28180[chr19:1855247-1855761]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 1855258 rs79604465 T C
GLIS3 POLR2A TCF4
5378947
chr19 1855319 rs567899651 A G
POLR2A
5378948
chr19 1855331 rs12611202 G A
INSM1 LFA1 PLAG1 POLR2A
5378949
chr19 1855334 rs12610131 T C
PLAG1 POLR2A
5378950
chr19 1855376 rs575351406 G A,C
POLR2A RUNX2
5378951
chr19 1855459 rs189900508 C T
POLR2A SP1 TFAP2A TFAP2B TFAP2C
5378952
chr19 1855501 rs540073070 G A
LFA1 NRF1 POLR2A
5378953
chr19 1855583 rs74401481 C T
POLR2A
5378954
chr19 1855613 rs182176520 G A
POLR2A TFAP2A TFAP2B TFAP2C
5378955
Genes possibly regulated by vista28180[chr19:1855247-1855761]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 1782074 1812275 - ATP8B3 ENSG00000130270.12 1812275 0.94 1.0 16761 57028
chr19 1815248 1848452 - REXO1 ENSG00000079313.7 1848452 0.66 1.0 16762 93205
chr19 1852399 1863567 - KLF16 ENSG00000129911.4 1863567 0.7 1.0 16763 92194
chr19 1876809 1885546 - ABHD17A ENSG00000129968.11 1885546 0.62 1.0 16764 70215
chr19 1905213 1926016 + SCAMP4 ENSG00000227500.5 1905213 0.75 1.0 16765 50548
chr19 1905377 1913444 + ADAT3 ENSG00000213638.4 1905377 0.61 1.0 16766 50384
chr19 1941188 1981337 + CSNK1G2 ENSG00000133275.11 1941188 0.62 1.0 16767 14573
Expression level of Genes
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miRNAs possibly regulated by vista28180[chr19:1855247-1855761]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr19 1816168 1816189 - hsa-miR-1909-3p MIMAT0007883 1848480 0.0019892014776925265 0.83523 0.0 798
Expression level of miRNAs
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