EnhancerDB
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  3. vista28183[chr19:1895445-1895653]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28183[chr19:1895445-1895653]
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Tissue distribution of vista28183
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Transcription factor that possibly regulate vista28183[chr19:1895445-1895653]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 1895392 1895641 RUNX3 UCSC Txn Factor no Conserved 108355770
chr19 1895448 1895461 NFKB2 JASPAR yes 70781243
chr19 1895448 1895461 NFKB2 JASPAR yes 112036427
chr19 1895450 1895460 NFKB1 JASPAR yes 70781244
chr19 1895450 1895460 NFKB1 JASPAR yes 112036428
chr19 1895451 1895456 GATA2 JASPAR yes 70781245
chr19 1895451 1895456 GATA2 JASPAR yes 112036429
chr19 1895453 1895463 MZF1 JASPAR yes 70781246
chr19 1895453 1895463 MZF1 JASPAR yes 112036430
chr19 1895456 1895462 SP1 TRANSFAC yes 70781247
chr19 1895456 1895462 SP1 TRANSFAC yes 112036431
chr19 1895456 1895466 SP1 JASPAR yes 70781248
chr19 1895456 1895466 SP1 JASPAR yes 112036432
chr19 1895484 1895497 ELF1 JASPAR yes 70781249
chr19 1895484 1895497 ELF1 JASPAR yes 112036433
chr19 1895487 1895497 ETV6 JASPAR yes 70781250
chr19 1895487 1895497 ETV6 JASPAR yes 112036434
chr19 1895487 1895498 ELK4 JASPAR yes 70781251
chr19 1895487 1895498 FLI1 JASPAR yes 70781252
chr19 1895487 1895498 ELK4 JASPAR yes 112036435
chr19 1895487 1895498 FLI1 JASPAR yes 112036436
chr19 1895488 1895496 EHF JASPAR yes 70781253
chr19 1895488 1895496 FEV JASPAR yes 70781254
chr19 1895488 1895496 EHF JASPAR yes 112036437
chr19 1895488 1895496 FEV JASPAR yes 112036438
chr19 1895489 1895496 SPI1 JASPAR yes 70781255
chr19 1895489 1895496 SPI1 JASPAR yes 112036439
chr19 1895512 1895517 ETS2 TRANSFAC yes 70781256
chr19 1895512 1895517 ETS2 TRANSFAC yes 112036440
chr19 1895512 1895520 EHF JASPAR yes 70781257
chr19 1895512 1895520 EHF JASPAR yes 112036441
chr19 1895515 1895526 FLI1 JASPAR yes 70781258
chr19 1895515 1895526 FLI1 JASPAR yes 112036442
chr19 1895516 1895521 ETS2 TRANSFAC yes 70781259
chr19 1895516 1895521 ETS2 TRANSFAC yes 112036443
chr19 1895516 1895524 FEV JASPAR yes 70781260
chr19 1895516 1895524 FEV JASPAR yes 112036444
chr19 1895517 1895524 SPI1 JASPAR yes 70781261
chr19 1895517 1895524 SPI1 JASPAR yes 112036445
chr19 1895521 1895535 E2F7 JASPAR yes 70781262
chr19 1895521 1895535 E2F7 JASPAR yes 112036446
chr19 1895525 1895530 SP1 TRANSFAC yes 70781263
chr19 1895525 1895530 SP1 TRANSFAC yes 112036447
chr19 1895525 1895531 SP1 TRANSFAC yes 70781264
chr19 1895525 1895531 SP1 TRANSFAC yes 112036448
chr19 1895530 1895534 LFA1 TRANSFAC yes 70781265
chr19 1895530 1895534 LFA1 TRANSFAC yes 112036449
chr19 1895533 1895548 MEF2C JASPAR yes 70781266
chr19 1895533 1895548 MEF2C JASPAR yes 112036450
chr19 1895534 1895549 MEF2A JASPAR yes 70781267
chr19 1895534 1895549 MEF2A JASPAR yes 112036451
chr19 1895535 1895547 MEF2A JASPAR yes 70781268
chr19 1895535 1895547 MEF2B JASPAR yes 70781269
chr19 1895535 1895547 MEF2D JASPAR yes 70781270
chr19 1895535 1895547 MEF2A JASPAR yes 112036452
chr19 1895535 1895547 MEF2B JASPAR yes 112036453
chr19 1895535 1895547 MEF2D JASPAR yes 112036454
chr19 1895536 1895546 MEF2A JASPAR yes 70781271
chr19 1895536 1895546 MEF2A JASPAR yes 112036455
chr19 1895547 1895557 SREBF1 JASPAR yes 70781272
chr19 1895547 1895557 SREBF1 JASPAR yes 112036456
chr19 1895562 1895566 ESR1 TRANSFAC yes 70781273
chr19 1895562 1895566 ESR1 TRANSFAC yes 112036457
chr19 1895575 1895581 MAZ TRANSFAC yes 70781274
chr19 1895575 1895581 MAZ TRANSFAC yes 112036458
chr19 1895575 1895586 E2F6 JASPAR yes 70781275
chr19 1895575 1895586 E2F6 JASPAR yes 112036459
chr19 1895598 1895609 NFKB1 JASPAR yes 70781276
chr19 1895598 1895609 NFKB1 JASPAR yes 112036460
chr19 1895615 1895626 STAT3 JASPAR yes 70781277
chr19 1895615 1895626 STAT3 JASPAR yes 112036461
chr19 1895617 1895629 TFAP2A JASPAR yes 70781278
chr19 1895617 1895629 TFAP2B JASPAR yes 70781279
chr19 1895617 1895629 TFAP2C JASPAR yes 70781280
chr19 1895617 1895629 TFAP2A JASPAR yes 112036462
chr19 1895617 1895629 TFAP2B JASPAR yes 112036463
chr19 1895617 1895629 TFAP2C JASPAR yes 112036464
chr19 1895628 1895638 SP1 JASPAR yes 70781281
chr19 1895628 1895638 SP1 JASPAR yes 112036465
chr19 1895629 1895637 SP1 TRANSFAC yes 70781282
chr19 1895629 1895637 SP1 TRANSFAC yes 112036466
chr19 1895634 1895644 SP1 JASPAR yes 70781283
chr19 1895634 1895644 SP1 JASPAR yes 112036467
chr19 1895647 1895667 RREB1 JASPAR yes 70781284
chr19 1895647 1895667 RREB1 JASPAR yes 112036468
SNP sites on vista28183[chr19:1895445-1895653]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 1895516 rs184436539 G A
EHF ETS2 FEV FLI1 RUNX3
5379275
chr19 1895560 rs75630264 C T
RUNX3
5379276
chr19 1895562 rs558142864 C A,G,T
ESR1 RUNX3
5379277
Genes possibly regulated by vista28183[chr19:1895445-1895653]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 1782074 1812275 - ATP8B3 ENSG00000130270.12 1812275 0.94 1.0 16761 16830
chr19 1815248 1848452 - REXO1 ENSG00000079313.7 1848452 0.66 1.0 16762 53007
chr19 1852399 1863567 - KLF16 ENSG00000129911.4 1863567 0.7 1.0 16763 68122
chr19 1876809 1885546 - ABHD17A ENSG00000129968.11 1885546 0.62 1.0 16764 90101
chr19 1905213 1926016 + SCAMP4 ENSG00000227500.5 1905213 0.75 1.0 16765 90440
chr19 1905377 1913444 + ADAT3 ENSG00000213638.4 1905377 0.61 1.0 16766 90276
chr19 1941188 1981337 + CSNK1G2 ENSG00000133275.11 1941188 0.62 1.0 16767 54465
Expression level of Genes
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miRNAs possibly regulated by vista28183[chr19:1895445-1895653]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results