EnhancerDB
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  3. vista28187[chr19:1942586-1943099]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28187[chr19:1942586-1943099]
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Tissue distribution of vista28187
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Transcription factor that possibly regulate vista28187[chr19:1942586-1943099]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 1940080 1942679 POLR2A UCSC Txn Factor no Conserved 108355841
chr19 1940080 1942679 POLR2A UCSC Txn Factor no Conserved 108355842
chr19 1942601 1942622 ZNF263 JASPAR yes 70781372
chr19 1942601 1942622 ZNF263 JASPAR yes 112038040
chr19 1942604 1942615 FLI1 JASPAR yes 70781373
chr19 1942604 1942615 FLI1 JASPAR yes 112038041
chr19 1942605 1942613 EHF JASPAR yes 70781374
chr19 1942605 1942613 EHF JASPAR yes 112038042
chr19 1942609 1942624 HNF4G JASPAR yes 70781375
chr19 1942609 1942624 HNF4G JASPAR yes 112038043
chr19 1942614 1942620 SOX10 JASPAR yes 70781376
chr19 1942614 1942620 SOX10 JASPAR yes 112038044
chr19 1942624 1942628 NFE TRANSFAC yes 70781377
chr19 1942624 1942628 NFE TRANSFAC yes 112038045
chr19 1942625 1942637 INSM1 JASPAR yes 70781378
chr19 1942625 1942637 INSM1 JASPAR yes 112038046
chr19 1942626 1942638 E2F8 JASPAR yes 70781379
chr19 1942626 1942638 E2F8 JASPAR yes 112038047
chr19 1942631 1942644 NFKB2 JASPAR yes 70781380
chr19 1942631 1942644 NFKB2 JASPAR yes 112038048
chr19 1942632 1942643 NFKB1 JASPAR yes 70781381
chr19 1942632 1942643 NFKB1 JASPAR yes 112038049
chr19 1942633 1942643 REL JASPAR yes 70781382
chr19 1942633 1942643 REL JASPAR yes 112038050
chr19 1942633 1942644 NFKB1 JASPAR yes 70781383
chr19 1942633 1942644 NFKB1 JASPAR yes 112038051
chr19 1942650 1942669 CTCF JASPAR yes 70781384
chr19 1942650 1942669 CTCF JASPAR yes 112038052
chr19 1942657 1942662 ETS2 TRANSFAC yes 70781385
chr19 1942657 1942662 ETS2 TRANSFAC yes 112038053
chr19 1942667 1942677 GSC2 JASPAR yes 70781386
chr19 1942667 1942677 GSC JASPAR yes 70781387
chr19 1942667 1942677 GSC2 JASPAR yes 112038054
chr19 1942667 1942677 GSC JASPAR yes 112038055
chr19 1942668 1942676 OTX1 JASPAR yes 70781388
chr19 1942668 1942676 OTX2 JASPAR yes 70781389
chr19 1942668 1942676 OTX1 JASPAR yes 112038056
chr19 1942668 1942676 OTX2 JASPAR yes 112038057
chr19 1942668 1942677 PITX3 JASPAR yes 70781390
chr19 1942668 1942677 PITX3 JASPAR yes 112038058
chr19 1942675 1942681 MAZ TRANSFAC yes 70781391
chr19 1942675 1942681 MAZ TRANSFAC yes 112038059
chr19 1942675 1942695 RREB1 JASPAR yes 70781392
chr19 1942675 1942695 RREB1 JASPAR yes 112038060
chr19 1942679 1942689 SP1 JASPAR yes 70781393
chr19 1942679 1942689 SP1 JASPAR yes 112038061
chr19 1942684 1942694 SP1 JASPAR yes 70781394
chr19 1942684 1942694 SP1 JASPAR yes 112038062
chr19 1942686 1942691 SP1 TRANSFAC yes 70781395
chr19 1942686 1942691 SP1 TRANSFAC yes 112038063
chr19 1942687 1942692 SP1 TRANSFAC yes 70781396
chr19 1942687 1942692 SP1 TRANSFAC yes 112038064
chr19 1942687 1942693 SP1 TRANSFAC yes 70781397
chr19 1942687 1942693 SP1 TRANSFAC yes 112038065
chr19 1942695 1942701 NFIC JASPAR yes 70781398
chr19 1942695 1942701 NFIC JASPAR yes 112038066
chr19 1942696 1942708 NHLH1 JASPAR yes 70781399
chr19 1942696 1942708 NHLH1 JASPAR yes 112038067
chr19 1942697 1942707 NHLH1 JASPAR yes 70781400
chr19 1942697 1942707 NHLH1 JASPAR yes 112038068
chr19 1942703 1942708 TFAP2A TRANSFAC yes 70781401
chr19 1942703 1942708 TFAP2A TRANSFAC yes 112038069
chr19 1942703 1942709 MZF1 JASPAR yes 70781402
chr19 1942703 1942709 MZF1 JASPAR yes 112038070
chr19 1942716 1942736 ESR1 JASPAR yes 70781403
chr19 1942716 1942736 ESR1 JASPAR yes 112038071
chr19 1942721 1942736 ESR2 JASPAR yes 70781404
chr19 1942721 1942736 ESR2 JASPAR yes 112038072
chr19 1942770 1942777 SPIB JASPAR yes 70781405
chr19 1942770 1942777 SPIB JASPAR yes 112038073
chr19 1942804 1942818 SPI1 JASPAR yes 70781406
chr19 1942804 1942818 SPI1 JASPAR yes 112038074
chr19 1942805 1942820 NR2C2 JASPAR yes 70781407
chr19 1942805 1942820 NR2C2 JASPAR yes 112038075
chr19 1942810 1942815 ETS2 TRANSFAC yes 70781408
chr19 1942810 1942815 ETS2 TRANSFAC yes 112038076
chr19 1942834 1942855 IRF1 JASPAR yes 70781409
chr19 1942834 1942855 IRF1 JASPAR yes 112038077
chr19 1942835 1942841 LEF1 TRANSFAC yes 70781410
chr19 1942835 1942841 SOX10 JASPAR yes 70781411
chr19 1942835 1942841 LEF1 TRANSFAC yes 112038078
chr19 1942835 1942841 SOX10 JASPAR yes 112038079
chr19 1942835 1942850 FOXP1 JASPAR yes 70781412
chr19 1942835 1942850 FOXP1 JASPAR yes 112038080
chr19 1942836 1942851 STAT2 JASPAR yes 70781413
chr19 1942836 1942851 STAT2 JASPAR yes 112038081
chr19 1942837 1942851 STAT1 JASPAR yes 70781414
chr19 1942837 1942851 STAT1 JASPAR yes 112038082
chr19 1942838 1942850 IRF1 JASPAR yes 70781415
chr19 1942838 1942850 IRF1 JASPAR yes 112038083
chr19 1942840 1942846 TCF4 TRANSFAC yes 70781416
chr19 1942840 1942846 TCF4 TRANSFAC yes 112038084
chr19 1942840 1942855 FOXP1 JASPAR yes 70781417
chr19 1942840 1942855 FOXP1 JASPAR yes 112038085
chr19 1942841 1942850 SRY JASPAR yes 70781418
chr19 1942841 1942850 SRY JASPAR yes 112038086
chr19 1942841 1942852 FOXP2 JASPAR yes 70781419
chr19 1942841 1942852 FOXP2 JASPAR yes 112038087
chr19 1942843 1942851 FOXO3 JASPAR yes 70781420
chr19 1942843 1942851 FOXO3 JASPAR yes 112038088
chr19 1942861 1942876 IRF9 JASPAR yes 70781421
chr19 1942861 1942876 IRF9 JASPAR yes 112038089
chr19 1942862 1942876 IRF7 JASPAR yes 70781422
chr19 1942862 1942876 IRF7 JASPAR yes 112038090
chr19 1942863 1942881 IRF2 JASPAR yes 70781423
chr19 1942863 1942881 IRF2 JASPAR yes 112038091
chr19 1942864 1942876 IRF1 JASPAR yes 70781424
chr19 1942864 1942876 IRF1 JASPAR yes 112038092
chr19 1942879 1942897 ESR1 JASPAR yes 70781425
chr19 1942879 1942897 ESR1 JASPAR yes 112038093
chr19 1942883 1942893 SREBF2 JASPAR yes 70781426
chr19 1942883 1942893 SREBF2 JASPAR yes 112038094
chr19 1942915 1942924 TFAP2A JASPAR yes 70781427
chr19 1942915 1942924 TFAP2A JASPAR yes 112038095
chr19 1942930 1942948 TP73 JASPAR yes 70781428
chr19 1942930 1942948 TP73 JASPAR yes 112038096
chr19 1942953 1942958 ATF1 TRANSFAC yes 70781429
chr19 1942953 1942958 ATF1 TRANSFAC yes 112038097
chr19 1942953 1942961 CREB1 JASPAR yes 70781430
chr19 1942953 1942961 CREB1 JASPAR yes 112038098
chr19 1942984 1942998 GLIS2 JASPAR yes 70781431
chr19 1942984 1942998 GLIS3 JASPAR yes 70781432
chr19 1942984 1942998 ZIC1 JASPAR yes 70781433
chr19 1942984 1942998 GLIS2 JASPAR yes 112038099
chr19 1942984 1942998 GLIS3 JASPAR yes 112038100
chr19 1942984 1942998 ZIC1 JASPAR yes 112038101
chr19 1942984 1942999 ZIC3 JASPAR yes 70781434
chr19 1942984 1942999 ZIC4 JASPAR yes 70781435
chr19 1942984 1942999 ZIC3 JASPAR yes 112038102
chr19 1942984 1942999 ZIC4 JASPAR yes 112038103
chr19 1943025 1943036 E2F6 JASPAR yes 70781436
chr19 1943025 1943036 E2F6 JASPAR yes 112038104
chr19 1943060 1943070 SMAD3 JASPAR yes 70781437
chr19 1943060 1943070 SMAD3 JASPAR yes 112038105
chr19 1943070 1943084 PLAG1 JASPAR yes 70781438
chr19 1943070 1943084 PLAG1 JASPAR yes 112038106
chr19 1943071 1943075 H4TF2 TRANSFAC yes 70781439
chr19 1943071 1943075 H4TF2 TRANSFAC yes 112038107
chr19 1943073 1943088 ZIC3 JASPAR yes 70781440
chr19 1943073 1943088 ZIC4 JASPAR yes 70781441
chr19 1943073 1943088 ZIC3 JASPAR yes 112038108
chr19 1943073 1943088 ZIC4 JASPAR yes 112038109
chr19 1943074 1943088 ZIC1 JASPAR yes 70781442
chr19 1943074 1943088 ZIC1 JASPAR yes 112038110
chr19 1943075 1943079 H1TF2 TRANSFAC yes 70781443
chr19 1943075 1943079 NFE TRANSFAC yes 70781444
chr19 1943075 1943079 SRF TRANSFAC yes 70781445
chr19 1943075 1943079 H1TF2 TRANSFAC yes 112038111
chr19 1943075 1943079 NFE TRANSFAC yes 112038112
chr19 1943075 1943079 SRF TRANSFAC yes 112038113
chr19 1943080 1943086 MAZ TRANSFAC yes 70781446
chr19 1943080 1943086 MAZ TRANSFAC yes 112038114
chr19 1943090 1943102 INSM1 JASPAR yes 70781447
chr19 1943090 1943102 INSM1 JASPAR yes 112038115
chr19 1943095 1943110 NR2C2 JASPAR yes 70781448
chr19 1943095 1943110 NR2C2 JASPAR yes 112038116
chr19 1943096 1943110 RXRB JASPAR yes 70781449
chr19 1943096 1943110 RXRG JASPAR yes 70781450
chr19 1943096 1943110 RXRB JASPAR yes 112038117
chr19 1943096 1943110 RXRG JASPAR yes 112038118
SNP sites on vista28187[chr19:1942586-1943099]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 1942623 rs533024181 TCCTGTCTGG T
HNF4G POLR2A
5379779
chr19 1942772 rs529818781 G A,T
SPIB
5379780
chr19 1942796 rs144677038 C A,G,T no 5379781
chr19 1942799 rs187482751 A G no 5379782
chr19 1942890 rs139820998 T C
ESR1 SREBF2
5379783
chr19 1942909 rs145457822 G T no 5379784
chr19 1942916 rs147684193 G T
TFAP2A
5379785
chr19 1942921 rs140529929 C G
TFAP2A
5379786
chr19 1942941 rs59813211 C T
TP73
5379787
chr19 1942957 rs151231200 C T
ATF1 CREB1
5379788
chr19 1942992 rs532010059 C A,T
GLIS2 GLIS3 ZIC1 ZIC3 ZIC4
5379789
Genes possibly regulated by vista28187[chr19:1942586-1943099]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 1815248 1848452 - REXO1 ENSG00000079313.7 1848452 0.66 1.0 16762 5866
chr19 1852399 1863567 - KLF16 ENSG00000129911.4 1863567 0.7 1.0 16763 20981
chr19 1876809 1885546 - ABHD17A ENSG00000129968.11 1885546 0.62 1.0 16764 42960
chr19 1905213 1926016 + SCAMP4 ENSG00000227500.5 1905213 0.75 1.0 16765 62627
chr19 1905377 1913444 + ADAT3 ENSG00000213638.4 1905377 0.61 1.0 16766 62791
chr19 1941188 1981337 + CSNK1G2 ENSG00000133275.11 1941188 0.62 1.0 16767 98602
chr19 1985447 2034880 - BTBD2 ENSG00000133243.4 2034880 0.68 1.0 16768 8219
Expression level of Genes
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miRNAs possibly regulated by vista28187[chr19:1942586-1943099]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results