EnhancerDB
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  3. vista28195[chr19:2061356-2061737]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28195[chr19:2061356-2061737]
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Tissue distribution of vista28195
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Transcription factor that possibly regulate vista28195[chr19:2061356-2061737]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 2060476 2062773 POLR2A UCSC Txn Factor no Conserved 108357232
chr19 2061028 2061550 PHF8 UCSC Txn Factor no Conserved 108357320
chr19 2061316 2061633 NRF1 UCSC Txn Factor no Conserved 108357371
chr19 2061471 2061847 RFX5 UCSC Txn Factor no Conserved 108357424
chr19 2061507 2061927 TBP UCSC Txn Factor no Conserved 108357439
chr19 2061574 2061754 IRF1 UCSC Txn Factor no Conserved 108357466
chr19 2061622 2062183 PHF8 UCSC Txn Factor no Conserved 108357484
chr19 2061359 2061371 ZBTB7B JASPAR yes 70781966
chr19 2061359 2061371 ZBTB7B JASPAR yes 112045991
chr19 2061360 2061370 ZNF740 JASPAR yes 70781967
chr19 2061360 2061370 ZNF740 JASPAR yes 112045992
chr19 2061360 2061374 GLIS2 JASPAR yes 70781968
chr19 2061360 2061374 GLIS2 JASPAR yes 112045993
chr19 2061362 2061372 ZNF740 JASPAR yes 70781969
chr19 2061362 2061372 ZNF740 JASPAR yes 112045994
chr19 2061362 2061376 GLIS2 JASPAR yes 70781970
chr19 2061362 2061376 GLIS2 JASPAR yes 112045995
chr19 2061381 2061398 RARA JASPAR yes 70781971
chr19 2061381 2061398 RXRA JASPAR yes 70781972
chr19 2061381 2061398 RARA JASPAR yes 112045996
chr19 2061381 2061398 RXRA JASPAR yes 112045997
chr19 2061383 2061391 MEIS3 JASPAR yes 70781973
chr19 2061383 2061391 MEIS3 JASPAR yes 112045998
chr19 2061390 2061405 NR2C2 JASPAR yes 70781974
chr19 2061390 2061405 NR2C2 JASPAR yes 112045999
chr19 2061409 2061421 ZBTB7B JASPAR yes 70781975
chr19 2061409 2061421 ZBTB7B JASPAR yes 112046000
chr19 2061415 2061419 H4TF2 TRANSFAC yes 70781976
chr19 2061415 2061419 H4TF2 TRANSFAC yes 112046001
chr19 2061428 2061443 RFX5 JASPAR yes 70781977
chr19 2061428 2061443 RFX5 JASPAR yes 112046002
chr19 2061432 2061445 NFKB1 JASPAR yes 70781978
chr19 2061432 2061445 NFKB1 JASPAR yes 112046003
chr19 2061433 2061444 NFKB1 JASPAR yes 70781979
chr19 2061433 2061444 NFKB1 JASPAR yes 112046004
chr19 2061434 2061444 NFKB1 JASPAR yes 70781980
chr19 2061434 2061444 RELA JASPAR yes 70781981
chr19 2061434 2061444 NFKB1 JASPAR yes 112046005
chr19 2061434 2061444 RELA JASPAR yes 112046006
chr19 2061439 2061449 SP1 JASPAR yes 70781982
chr19 2061439 2061449 SP1 JASPAR yes 112046007
chr19 2061440 2061446 SP1 TRANSFAC yes 70781983
chr19 2061440 2061446 SP1 TRANSFAC yes 112046008
chr19 2061440 2061450 SP1 JASPAR yes 70781984
chr19 2061440 2061450 SP1 JASPAR yes 112046009
chr19 2061453 2061464 NRF1 JASPAR yes 70781985
chr19 2061453 2061464 NRF1 JASPAR yes 112046010
chr19 2061460 2061471 NRF1 JASPAR yes 70781986
chr19 2061460 2061471 NRF1 JASPAR yes 112046011
chr19 2061461 2061472 NRF1 JASPAR yes 70781987
chr19 2061461 2061472 NRF1 JASPAR yes 112046012
chr19 2061469 2061488 REST JASPAR yes 70781988
chr19 2061469 2061488 REST JASPAR yes 112046013
chr19 2061486 2061491 SP1 TRANSFAC yes 70781989
chr19 2061486 2061491 SP1 TRANSFAC yes 112046014
chr19 2061493 2061508 TFAP2A JASPAR yes 70781990
chr19 2061493 2061508 TFAP2C JASPAR yes 70781991
chr19 2061493 2061508 TFAP2A JASPAR yes 112046015
chr19 2061493 2061508 TFAP2C JASPAR yes 112046016
chr19 2061497 2061506 TFAP2A JASPAR yes 70781992
chr19 2061497 2061506 TFAP2A JASPAR yes 112046017
chr19 2061502 2061512 SP1 JASPAR yes 70781993
chr19 2061502 2061512 SP1 JASPAR yes 112046018
chr19 2061511 2061530 RFX2 JASPAR yes 70781994
chr19 2061511 2061530 RFX2 JASPAR yes 112046019
chr19 2061513 2061528 RFX5 JASPAR yes 70781995
chr19 2061513 2061528 RFX5 JASPAR yes 112046020
chr19 2061515 2061531 RFX2 JASPAR yes 70781996
chr19 2061515 2061531 RFX3 JASPAR yes 70781997
chr19 2061515 2061531 RFX4 JASPAR yes 70781998
chr19 2061515 2061531 RFX5 JASPAR yes 70781999
chr19 2061515 2061531 RFX2 JASPAR yes 112046021
chr19 2061515 2061531 RFX3 JASPAR yes 112046022
chr19 2061515 2061531 RFX4 JASPAR yes 112046023
chr19 2061515 2061531 RFX5 JASPAR yes 112046024
chr19 2061516 2061535 RFX2 JASPAR yes 70782000
chr19 2061516 2061535 RFX2 JASPAR yes 112046025
chr19 2061523 2061527 LFA1 TRANSFAC yes 70782001
chr19 2061523 2061527 LFA1 TRANSFAC yes 112046026
chr19 2061535 2061541 ATF1 TRANSFAC yes 70782002
chr19 2061535 2061541 ATF1 TRANSFAC yes 112046027
chr19 2061561 2061576 NR2C2 JASPAR yes 70782003
chr19 2061561 2061576 NR2C2 JASPAR yes 112046028
chr19 2061573 2061584 E2F6 JASPAR yes 70782004
chr19 2061573 2061584 E2F6 JASPAR yes 112046029
chr19 2061578 2061588 SP1 JASPAR yes 70782005
chr19 2061578 2061588 SP1 JASPAR yes 112046030
chr19 2061580 2061585 SP1 TRANSFAC yes 70782006
chr19 2061580 2061585 SP1 TRANSFAC yes 112046031
chr19 2061581 2061586 SP1 TRANSFAC yes 70782007
chr19 2061581 2061586 SP1 TRANSFAC yes 112046032
chr19 2061581 2061587 SP1 TRANSFAC yes 70782008
chr19 2061581 2061587 SP1 TRANSFAC yes 112046033
chr19 2061584 2061589 SP1 TRANSFAC yes 70782009
chr19 2061584 2061589 SP1 TRANSFAC yes 112046034
chr19 2061617 2061621 YY1 TRANSFAC yes 70782010
chr19 2061617 2061621 YY1 TRANSFAC yes 112046035
chr19 2061633 2061648 HNF4A JASPAR yes 70782011
chr19 2061633 2061648 HNF4A JASPAR yes 112046036
chr19 2061648 2061663 NFYB JASPAR yes 70782012
chr19 2061648 2061663 NFYB JASPAR yes 112046037
chr19 2061650 2061666 NFYA JASPAR yes 70782013
chr19 2061650 2061666 NFYA JASPAR yes 112046038
chr19 2061654 2061669 SOX21 JASPAR yes 70782014
chr19 2061654 2061669 SOX21 JASPAR yes 112046039
chr19 2061654 2061670 SOX4 JASPAR yes 70782015
chr19 2061654 2061670 SOX4 JASPAR yes 112046040
chr19 2061655 2061659 H1TF2 TRANSFAC yes 70782016
chr19 2061655 2061659 NFE TRANSFAC yes 70782017
chr19 2061655 2061659 SRF TRANSFAC yes 70782018
chr19 2061655 2061659 H1TF2 TRANSFAC yes 112046041
chr19 2061655 2061659 NFE TRANSFAC yes 112046042
chr19 2061655 2061659 SRF TRANSFAC yes 112046043
chr19 2061666 2061681 RFX5 JASPAR yes 70782019
chr19 2061666 2061681 RFX5 JASPAR yes 112046044
chr19 2061675 2061680 SP1 TRANSFAC yes 70782020
chr19 2061675 2061680 SP1 TRANSFAC yes 112046045
chr19 2061710 2061724 MTF1 JASPAR yes 70782021
chr19 2061710 2061724 MTF1 JASPAR yes 112046046
chr19 2061711 2061722 NRF1 JASPAR yes 70782022
chr19 2061711 2061722 NRF1 JASPAR yes 112046047
chr19 2061720 2061724 YY1 TRANSFAC yes 70782023
chr19 2061720 2061724 YY1 TRANSFAC yes 112046048
SNP sites on vista28195[chr19:2061356-2061737]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 2061509 rs372807277 G T
NRF1 PHF8 POLR2A RFX5 SP1 TBP
5380942
chr19 2061715 rs10414066 C T
IRF1 MTF1 NRF1 PHF8 POLR2A RFX5 TBP
5380943
Genes possibly regulated by vista28195[chr19:2061356-2061737]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 1985447 2034880 - BTBD2 ENSG00000133243.4 2034880 0.68 1.0 16768 73524
chr19 2037470 2051243 - MKNK2 ENSG00000099875.10 2051243 0.67 1.0 16769 89887
chr19 2071037 2096672 - MOB3A ENSG00000172081.9 2096672 0.72 1.0 16770 65065
chr19 2096380 2099592 + IZUMO4 ENSG00000099840.9 2096380 0.82 1.0 16771 65357
Expression level of Genes
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miRNAs possibly regulated by vista28195[chr19:2061356-2061737]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results