EnhancerDB
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  3. vista28197[chr19:2087738-2088017]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28197[chr19:2087738-2088017]
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Tissue distribution of vista28197
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Transcription factor that possibly regulate vista28197[chr19:2087738-2088017]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 2087060 2087786 CEBPB UCSC Txn Factor no Conserved 108357609
chr19 2087666 2087906 SPI1 UCSC Txn Factor no Conserved 108357647
chr19 2087738 2087752 NR2F1 JASPAR yes 70782057
chr19 2087738 2087752 NR2F1 JASPAR yes 112048067
chr19 2087770 2087791 IRF1 JASPAR yes 70782058
chr19 2087770 2087791 IRF1 JASPAR yes 112048068
chr19 2087774 2087788 SPI1 JASPAR yes 70782059
chr19 2087774 2087788 SPIC JASPAR yes 70782060
chr19 2087774 2087788 SPI1 JASPAR yes 112048069
chr19 2087774 2087788 SPIC JASPAR yes 112048070
chr19 2087774 2087789 STAT2 JASPAR yes 70782061
chr19 2087774 2087789 STAT2 JASPAR yes 112048071
chr19 2087775 2087788 ELF1 JASPAR yes 70782062
chr19 2087775 2087788 ELF1 JASPAR yes 112048072
chr19 2087778 2087785 SPIB JASPAR yes 70782063
chr19 2087778 2087785 SPIB JASPAR yes 112048073
chr19 2087792 2087798 PEA3 TRANSFAC yes 70782064
chr19 2087792 2087798 PEA3 TRANSFAC yes 112048074
chr19 2087795 2087805 NFKB1 JASPAR yes 70782065
chr19 2087795 2087805 REL JASPAR yes 70782066
chr19 2087795 2087805 NFKB1 JASPAR yes 112048075
chr19 2087795 2087805 REL JASPAR yes 112048076
chr19 2087798 2087803 SP1 TRANSFAC yes 70782067
chr19 2087798 2087803 SP1 TRANSFAC yes 112048077
chr19 2087799 2087810 TFAP2A JASPAR yes 70782068
chr19 2087799 2087810 TFAP2C JASPAR yes 70782069
chr19 2087799 2087810 TFAP2A JASPAR yes 112048078
chr19 2087799 2087810 TFAP2C JASPAR yes 112048079
chr19 2087854 2087857 MYB TRANSFAC yes 70782070
chr19 2087854 2087857 MYB TRANSFAC yes 112048080
chr19 2087882 2087891 HIC2 JASPAR yes 70782071
chr19 2087882 2087891 HIC2 JASPAR yes 112048081
chr19 2087885 2087889 LFA1 TRANSFAC yes 70782072
chr19 2087885 2087889 LFA1 TRANSFAC yes 112048082
chr19 2087886 2087898 ZBTB7C JASPAR yes 70782073
chr19 2087886 2087898 ZBTB7C JASPAR yes 112048083
chr19 2087896 2087906 NFIA JASPAR yes 70782074
chr19 2087896 2087906 NFIA JASPAR yes 112048084
chr19 2087897 2087906 NFIX JASPAR yes 70782075
chr19 2087897 2087906 NFIX JASPAR yes 112048085
chr19 2087898 2087904 NFIC JASPAR yes 70782076
chr19 2087898 2087904 NFIC JASPAR yes 112048086
chr19 2087911 2087918 E2F1 TRANSFAC yes 70782077
chr19 2087911 2087918 E2F1 TRANSFAC yes 112048087
chr19 2087923 2087929 YY1 JASPAR yes 70782078
chr19 2087923 2087929 YY1 JASPAR yes 112048088
chr19 2087945 2087949 LFA1 TRANSFAC yes 70782079
chr19 2087945 2087949 LFA1 TRANSFAC yes 112048089
chr19 2087965 2087972 SP1 TRANSFAC yes 70782080
chr19 2087965 2087972 SP1 TRANSFAC yes 112048090
chr19 2087967 2087972 SP1 TRANSFAC yes 70782081
chr19 2087967 2087972 SP1 TRANSFAC yes 112048091
chr19 2087973 2087993 PPARG JASPAR yes 70782082
chr19 2087973 2087993 PPARG JASPAR yes 112048092
chr19 2087984 2087989 SP1 TRANSFAC yes 70782083
chr19 2087984 2087989 SP1 TRANSFAC yes 112048093
chr19 2087998 2088017 CTCF JASPAR yes 70782084
chr19 2087998 2088017 CTCF JASPAR yes 112048094
SNP sites on vista28197[chr19:2087738-2088017]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 2087835 rs8110291 C G
SPI1
5381187
chr19 2087876 rs189496874 G C
SPI1
5381188
chr19 2087943 rs8113808 T C no 5381189
chr19 2087970 rs74628100 G A
SP1
5381190
chr19 2088002 rs570818861 C T
CTCF
5381191
chr19 2088011 rs115775208 G A
CTCF
5381192
Genes possibly regulated by vista28197[chr19:2087738-2088017]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 1985447 2034880 - BTBD2 ENSG00000133243.4 2034880 0.68 1.0 16768 47142
chr19 2037470 2051243 - MKNK2 ENSG00000099875.10 2051243 0.67 1.0 16769 63505
chr19 2071037 2096672 - MOB3A ENSG00000172081.9 2096672 0.72 1.0 16770 91345
chr19 2096380 2099592 + IZUMO4 ENSG00000099840.9 2096380 0.82 1.0 16771 91637
chr19 2100988 2164464 - AP3D1 ENSG00000065000.11 2164464 0.64 1.0 16772 23553
chr19 2164148 2232577 + DOT1L ENSG00000104885.13 2164148 0.75 1.0 16773 23869
Expression level of Genes
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miRNAs possibly regulated by vista28197[chr19:2087738-2088017]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results