EnhancerDB
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  3. vista28198[chr19:2093042-2093330]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28198[chr19:2093042-2093330]
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Tissue distribution of vista28198
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Transcription factor that possibly regulate vista28198[chr19:2093042-2093330]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 2092707 2095056 POLR2A UCSC Txn Factor no Conserved 108357709
chr19 2092707 2095056 POLR2A UCSC Txn Factor no Conserved 108357710
chr19 2093041 2093046 TFAP2A TRANSFAC yes 70782085
chr19 2093041 2093046 TFAP2A TRANSFAC yes 112048820
chr19 2093041 2093047 MZF1 JASPAR yes 70782086
chr19 2093041 2093047 MZF1 JASPAR yes 112048821
chr19 2093043 2093048 ETS2 TRANSFAC yes 70782087
chr19 2093043 2093048 ETS2 TRANSFAC yes 112048822
chr19 2093058 2093064 MZF1 JASPAR yes 70782088
chr19 2093058 2093064 MZF1 JASPAR yes 112048823
chr19 2093059 2093079 RREB1 JASPAR yes 70782089
chr19 2093059 2093079 RREB1 JASPAR yes 112048824
chr19 2093083 2093093 TFAP4 JASPAR yes 70782090
chr19 2093083 2093093 TFAP4 JASPAR yes 112048825
chr19 2093093 2093098 TFAP2A TRANSFAC yes 70782091
chr19 2093093 2093098 TFAP2A TRANSFAC yes 112048826
chr19 2093093 2093099 MZF1 JASPAR yes 70782092
chr19 2093093 2093099 MZF1 JASPAR yes 112048827
chr19 2093123 2093127 H4TF2 TRANSFAC yes 70782093
chr19 2093123 2093127 H4TF2 TRANSFAC yes 112048828
chr19 2093131 2093139 TBX15 JASPAR yes 70782094
chr19 2093131 2093139 TBX15 JASPAR yes 112048829
chr19 2093131 2093142 E2F6 JASPAR yes 70782095
chr19 2093131 2093142 E2F6 JASPAR yes 112048830
chr19 2093132 2093137 SP1 TRANSFAC yes 70782096
chr19 2093132 2093137 SP1 TRANSFAC yes 112048831
chr19 2093139 2093144 GATA2 JASPAR yes 70782097
chr19 2093139 2093144 GATA2 JASPAR yes 112048832
chr19 2093142 2093156 GLIS3 JASPAR yes 70782098
chr19 2093142 2093156 GLIS3 JASPAR yes 112048833
chr19 2093159 2093174 FOXP1 JASPAR yes 70782099
chr19 2093159 2093174 FOXP1 JASPAR yes 112048834
chr19 2093160 2093175 FOXP1 JASPAR yes 70782100
chr19 2093160 2093175 FOXP1 JASPAR yes 112048835
chr19 2093182 2093201 PAX5 JASPAR yes 70782101
chr19 2093182 2093201 PAX5 JASPAR yes 112048836
chr19 2093212 2093222 SREBF1 JASPAR yes 70782102
chr19 2093212 2093222 SREBF2 JASPAR yes 70782103
chr19 2093212 2093222 SREBF1 JASPAR yes 112048837
chr19 2093212 2093222 SREBF2 JASPAR yes 112048838
chr19 2093217 2093225 NR4A2 JASPAR yes 70782104
chr19 2093217 2093225 NR4A2 JASPAR yes 112048839
chr19 2093223 2093237 TLX1 JASPAR yes 70782105
chr19 2093223 2093237 TLX1 JASPAR yes 112048840
chr19 2093237 2093246 SP1 TRANSFAC yes 70782106
chr19 2093237 2093246 SP1 TRANSFAC yes 112048841
chr19 2093238 2093246 SP1 TRANSFAC yes 70782107
chr19 2093238 2093246 SP1 TRANSFAC yes 112048842
chr19 2093238 2093248 SP1 JASPAR yes 70782108
chr19 2093238 2093248 SP1 JASPAR yes 112048843
chr19 2093297 2093309 HES5 JASPAR yes 70782109
chr19 2093297 2093309 HES7 JASPAR yes 70782110
chr19 2093297 2093309 HES5 JASPAR yes 112048844
chr19 2093297 2093309 HES7 JASPAR yes 112048845
chr19 2093297 2093317 TP63 JASPAR yes 70782111
chr19 2093297 2093317 TP63 JASPAR yes 112048846
chr19 2093298 2093308 HEY1 JASPAR yes 70782112
chr19 2093298 2093308 HEY2 JASPAR yes 70782113
chr19 2093298 2093308 HEY1 JASPAR yes 112048847
chr19 2093298 2093308 HEY2 JASPAR yes 112048848
chr19 2093298 2093316 TP53 JASPAR yes 70782114
chr19 2093298 2093316 TP73 JASPAR yes 70782115
chr19 2093298 2093316 TP53 JASPAR yes 112048849
chr19 2093298 2093316 TP73 JASPAR yes 112048850
chr19 2093303 2093314 GCM1 JASPAR yes 70782116
chr19 2093303 2093314 GCM1 JASPAR yes 112048851
chr19 2093305 2093325 TP53 JASPAR yes 70782117
chr19 2093305 2093325 TP53 JASPAR yes 112048852
chr19 2093308 2093326 TP53 JASPAR yes 70782118
chr19 2093308 2093326 TP53 JASPAR yes 112048853
SNP sites on vista28198[chr19:2093042-2093330]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 2093053 rs72983416 T C
POLR2A
5381251
chr19 2093180 rs77652020 G A
POLR2A
5381252
chr19 2093305 rs113503522 C T
GCM1 HES5 HES7 HEY1 HEY2 POLR2A TP53 TP63 TP73
5381253
Genes possibly regulated by vista28198[chr19:2093042-2093330]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 1985447 2034880 - BTBD2 ENSG00000133243.4 2034880 0.68 1.0 16768 41838
chr19 2037470 2051243 - MKNK2 ENSG00000099875.10 2051243 0.67 1.0 16769 58201
chr19 2071037 2096672 - MOB3A ENSG00000172081.9 2096672 0.72 1.0 16770 96658
chr19 2096380 2099592 + IZUMO4 ENSG00000099840.9 2096380 0.82 1.0 16771 96950
chr19 2100988 2164464 - AP3D1 ENSG00000065000.11 2164464 0.64 1.0 16772 28866
chr19 2164148 2232577 + DOT1L ENSG00000104885.13 2164148 0.75 1.0 16773 29182
Expression level of Genes
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miRNAs possibly regulated by vista28198[chr19:2093042-2093330]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results