EnhancerDB
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  3. vista2820[chr1:108870455-108870699]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2820[chr1:108870455-108870699]
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Tissue distribution of vista2820
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Transcription factor that possibly regulate vista2820[chr1:108870455-108870699]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 108870282 108870730 CTCF UCSC Txn Factor no Conserved 107818122
chr1 108870379 108870663 RAD21 UCSC Txn Factor no Conserved 107818131
chr1 108870455 108870476 REST JASPAR yes 31389631
chr1 108870455 108870476 REST JASPAR yes 118345494
chr1 108870487 108870508 ZNF263 JASPAR yes 31389632
chr1 108870487 108870508 ZNF263 JASPAR yes 118345495
chr1 108870488 108870509 ZNF263 JASPAR yes 31389633
chr1 108870488 108870509 ZNF263 JASPAR yes 118345496
chr1 108870505 108870524 CTCF JASPAR yes 31389634
chr1 108870505 108870524 CTCF JASPAR yes 118345497
chr1 108870516 108870520 LFA1 TRANSFAC yes 31389635
chr1 108870516 108870520 LFA1 TRANSFAC yes 118345498
chr1 108870579 108870585 SOX10 JASPAR yes 31389636
chr1 108870579 108870585 SOX10 JASPAR yes 118345499
chr1 108870590 108870601 FLI1 JASPAR yes 31389637
chr1 108870590 108870601 FLI1 JASPAR yes 118345500
chr1 108870591 108870601 ERF JASPAR yes 31389638
chr1 108870591 108870601 ETS1 JASPAR yes 31389639
chr1 108870591 108870601 ERF JASPAR yes 118345501
chr1 108870591 108870601 ETS1 JASPAR yes 118345502
chr1 108870591 108870602 ETV2 JASPAR yes 31389640
chr1 108870591 108870602 ETV2 JASPAR yes 118345503
chr1 108870591 108870604 ELF1 JASPAR yes 31389641
chr1 108870591 108870604 ELF1 JASPAR yes 118345504
chr1 108870591 108870605 SPIC JASPAR yes 31389642
chr1 108870591 108870605 SPIC JASPAR yes 118345505
chr1 108870597 108870612 FOXP1 JASPAR yes 31389643
chr1 108870597 108870612 FOXP1 JASPAR yes 118345506
chr1 108870598 108870609 FOXP2 JASPAR yes 31389644
chr1 108870598 108870609 FOXP2 JASPAR yes 118345507
chr1 108870600 108870608 FOXO3 JASPAR yes 31389645
chr1 108870600 108870608 FOXO3 JASPAR yes 118345508
chr1 108870604 108870609 ETS2 TRANSFAC yes 31389646
chr1 108870604 108870609 ETS2 TRANSFAC yes 118345509
chr1 108870604 108870619 RUNX2 JASPAR yes 31389647
chr1 108870604 108870619 RUNX2 JASPAR yes 118345510
chr1 108870607 108870613 SOX10 JASPAR yes 31389648
chr1 108870607 108870613 SOX10 JASPAR yes 118345511
chr1 108870608 108870618 RUNX3 JASPAR yes 31389649
chr1 108870608 108870618 RUNX3 JASPAR yes 118345512
chr1 108870613 108870617 ESR1 TRANSFAC yes 31389650
chr1 108870613 108870617 ESR1 TRANSFAC yes 118345513
chr1 108870625 108870631 SOX10 JASPAR yes 31389651
chr1 108870625 108870631 SOX10 JASPAR yes 118345514
chr1 108870680 108870695 MEF2A JASPAR yes 31389652
chr1 108870680 108870695 MEF2A JASPAR yes 118345515
chr1 108870681 108870696 MEF2C JASPAR yes 31389653
chr1 108870681 108870696 MEF2C JASPAR yes 118345516
chr1 108870682 108870694 MEF2A JASPAR yes 31389654
chr1 108870682 108870694 MEF2B JASPAR yes 31389655
chr1 108870682 108870694 MEF2A JASPAR yes 118345517
chr1 108870682 108870694 MEF2B JASPAR yes 118345518
chr1 108870684 108870688 YY1 TRANSFAC yes 31389656
chr1 108870684 108870688 YY1 TRANSFAC yes 118345519
chr1 108870688 108870697 VENTX JASPAR yes 31389657
chr1 108870688 108870697 VENTX JASPAR yes 118345520
SNP sites on vista2820[chr1:108870455-108870699]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 108870525 rs11185315 A G
CTCF RAD21
542128
Genes possibly regulated by vista2820[chr1:108870455-108870699]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 108765963 108786689 - NBPF4 ENSG00000196427.9 108786689 0.96 0.94 956 16234
chr1 108918421 109013624 + NBPF6 ENSG00000186086.12 108918421 0.95 0.99 957 52278
Expression level of Genes
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miRNAs possibly regulated by vista2820[chr1:108870455-108870699]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results