EnhancerDB
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  3. vista28204[chr19:2168320-2168637]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28204[chr19:2168320-2168637]
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Tissue distribution of vista28204
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Transcription factor that possibly regulate vista28204[chr19:2168320-2168637]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 2167921 2169601 POLR2A UCSC Txn Factor no Conserved 108358301
chr19 2167921 2169601 POLR2A UCSC Txn Factor no Conserved 108358302
chr19 2168265 2168643 EBF1 UCSC Txn Factor no Conserved 108358429
chr19 2168271 2168692 RELA UCSC Txn Factor no Conserved 108358433
chr19 2168300 2168631 RUNX3 UCSC Txn Factor no Conserved 108358441
chr19 2168546 2168661 RPC155 UCSC Txn Factor no Conserved 108358534
chr19 2168326 2168333 POU2F1 TRANSFAC yes 70782378
chr19 2168326 2168333 POU2F1 TRANSFAC yes 112053059
chr19 2168326 2168337 PHOX2A JASPAR yes 70782379
chr19 2168326 2168337 PROP1 JASPAR yes 70782380
chr19 2168326 2168337 PHOX2A JASPAR yes 112053060
chr19 2168326 2168337 PROP1 JASPAR yes 112053061
chr19 2168331 2168346 MEF2C JASPAR yes 70782381
chr19 2168331 2168346 MEF2C JASPAR yes 112053062
chr19 2168332 2168347 MEF2A JASPAR yes 70782382
chr19 2168332 2168347 MEF2A JASPAR yes 112053063
chr19 2168333 2168345 MEF2A JASPAR yes 70782383
chr19 2168333 2168345 MEF2B JASPAR yes 70782384
chr19 2168333 2168345 MEF2D JASPAR yes 70782385
chr19 2168333 2168345 MEF2A JASPAR yes 112053064
chr19 2168333 2168345 MEF2B JASPAR yes 112053065
chr19 2168333 2168345 MEF2D JASPAR yes 112053066
chr19 2168334 2168344 MEF2A JASPAR yes 70782386
chr19 2168334 2168344 MEF2A JASPAR yes 112053067
chr19 2168335 2168339 TEAD2 TRANSFAC yes 70782387
chr19 2168335 2168339 TEAD2 TRANSFAC yes 112053068
chr19 2168335 2168340 TBP TRANSFAC yes 70782388
chr19 2168335 2168340 TBP TRANSFAC yes 112053069
chr19 2168335 2168341 TMF TRANSFAC yes 70782389
chr19 2168335 2168341 TMF TRANSFAC yes 112053070
chr19 2168370 2168380 RORA JASPAR yes 70782390
chr19 2168370 2168380 RORA JASPAR yes 112053071
chr19 2168371 2168382 ESRRA JASPAR yes 70782391
chr19 2168371 2168382 ESRRB JASPAR yes 70782392
chr19 2168371 2168382 ESRRA JASPAR yes 112053072
chr19 2168371 2168382 ESRRB JASPAR yes 112053073
chr19 2168371 2168384 NR2F1 JASPAR yes 70782393
chr19 2168371 2168384 NR2F1 JASPAR yes 112053074
chr19 2168373 2168381 NR4A2 JASPAR yes 70782394
chr19 2168373 2168381 NR4A2 JASPAR yes 112053075
chr19 2168375 2168379 ESR1 TRANSFAC yes 70782395
chr19 2168375 2168379 ESR1 TRANSFAC yes 112053076
chr19 2168376 2168386 TFAP4 JASPAR yes 70782396
chr19 2168376 2168386 TFAP4 JASPAR yes 112053077
chr19 2168385 2168389 H4TF2 TRANSFAC yes 70782397
chr19 2168385 2168389 H4TF2 TRANSFAC yes 112053078
chr19 2168385 2168399 EBF1 JASPAR yes 70782398
chr19 2168385 2168399 EBF1 JASPAR yes 112053079
chr19 2168386 2168397 EBF1 JASPAR yes 70782399
chr19 2168386 2168397 EBF1 JASPAR yes 112053080
chr19 2168387 2168393 MZF1 JASPAR yes 70782400
chr19 2168387 2168393 MZF1 JASPAR yes 112053081
chr19 2168393 2168399 MAZ TRANSFAC yes 70782401
chr19 2168393 2168399 MAZ TRANSFAC yes 112053082
chr19 2168404 2168419 NR2C2 JASPAR yes 70782402
chr19 2168404 2168419 NR2C2 JASPAR yes 112053083
chr19 2168411 2168423 TFAP2A JASPAR yes 70782403
chr19 2168411 2168423 TFAP2B JASPAR yes 70782404
chr19 2168411 2168423 TFAP2C JASPAR yes 70782405
chr19 2168411 2168423 TFAP2A JASPAR yes 112053084
chr19 2168411 2168423 TFAP2B JASPAR yes 112053085
chr19 2168411 2168423 TFAP2C JASPAR yes 112053086
chr19 2168411 2168426 TFAP2A JASPAR yes 70782406
chr19 2168411 2168426 TFAP2C JASPAR yes 70782407
chr19 2168411 2168426 TFAP2A JASPAR yes 112053087
chr19 2168411 2168426 TFAP2C JASPAR yes 112053088
chr19 2168412 2168421 TFAP2A JASPAR yes 70782408
chr19 2168412 2168421 TFAP2A JASPAR yes 112053089
chr19 2168412 2168423 EBF1 JASPAR yes 70782409
chr19 2168412 2168423 EBF1 JASPAR yes 112053090
chr19 2168419 2168434 RUNX2 JASPAR yes 70782410
chr19 2168419 2168434 RUNX2 JASPAR yes 112053091
chr19 2168440 2168450 SP1 JASPAR yes 70782411
chr19 2168440 2168450 SP1 JASPAR yes 112053092
chr19 2168441 2168448 CEBPA TRANSFAC yes 70782412
chr19 2168441 2168448 CEBPA TRANSFAC yes 112053093
chr19 2168446 2168451 SP1 TRANSFAC yes 70782413
chr19 2168446 2168451 SP1 TRANSFAC yes 112053094
chr19 2168449 2168455 YY1 JASPAR yes 70782414
chr19 2168449 2168455 YY1 JASPAR yes 112053095
chr19 2168456 2168469 ELF1 JASPAR yes 70782415
chr19 2168456 2168469 ELF1 JASPAR yes 112053096
chr19 2168456 2168477 ZNF263 JASPAR yes 70782416
chr19 2168456 2168477 ZNF263 JASPAR yes 112053097
chr19 2168459 2168465 PEA3 TRANSFAC yes 70782417
chr19 2168459 2168465 PEA3 TRANSFAC yes 112053098
chr19 2168459 2168470 FLI1 JASPAR yes 70782418
chr19 2168459 2168470 FLI1 JASPAR yes 112053099
chr19 2168463 2168478 MEF2C JASPAR yes 70782419
chr19 2168463 2168478 MEF2C JASPAR yes 112053100
chr19 2168477 2168487 MYF6 JASPAR yes 70782420
chr19 2168477 2168487 MYF6 JASPAR yes 112053101
chr19 2168482 2168486 NFE TRANSFAC yes 70782421
chr19 2168482 2168486 NFE TRANSFAC yes 112053102
chr19 2168493 2168499 ETS1 JASPAR yes 70782422
chr19 2168493 2168499 ETS1 JASPAR yes 112053103
chr19 2168508 2168514 ETS1 JASPAR yes 70782423
chr19 2168508 2168514 SPI1 JASPAR yes 70782424
chr19 2168508 2168514 ETS1 JASPAR yes 112053104
chr19 2168508 2168514 SPI1 JASPAR yes 112053105
chr19 2168522 2168526 H1TF2 TRANSFAC yes 70782425
chr19 2168522 2168526 NFE TRANSFAC yes 70782426
chr19 2168522 2168526 SRF TRANSFAC yes 70782427
chr19 2168522 2168526 H1TF2 TRANSFAC yes 112053106
chr19 2168522 2168526 NFE TRANSFAC yes 112053107
chr19 2168522 2168526 SRF TRANSFAC yes 112053108
chr19 2168524 2168534 NFIA JASPAR yes 70782428
chr19 2168524 2168534 NFIA JASPAR yes 112053109
chr19 2168526 2168532 NFIC JASPAR yes 70782429
chr19 2168526 2168532 NFIC JASPAR yes 112053110
chr19 2168530 2168549 CTCF JASPAR yes 70782430
chr19 2168530 2168549 CTCF JASPAR yes 112053111
chr19 2168542 2168548 PEA3 TRANSFAC yes 70782431
chr19 2168542 2168548 PEA3 TRANSFAC yes 112053112
chr19 2168542 2168552 SP1 JASPAR yes 70782432
chr19 2168542 2168552 SP1 JASPAR yes 112053113
chr19 2168542 2168553 FLI1 JASPAR yes 70782433
chr19 2168542 2168553 FLI1 JASPAR yes 112053114
chr19 2168543 2168551 EHF JASPAR yes 70782434
chr19 2168543 2168551 EHF JASPAR yes 112053115
chr19 2168576 2168593 BCL6B JASPAR yes 70782435
chr19 2168576 2168593 BCL6B JASPAR yes 112053116
chr19 2168585 2168590 GATA2 JASPAR yes 70782436
chr19 2168585 2168590 GATA2 JASPAR yes 112053117
chr19 2168588 2168591 MYB TRANSFAC yes 70782437
chr19 2168588 2168591 MYB TRANSFAC yes 112053118
chr19 2168615 2168619 YY1 TRANSFAC yes 70782438
chr19 2168615 2168619 YY1 TRANSFAC yes 112053119
chr19 2168622 2168626 YY1 TRANSFAC yes 70782439
chr19 2168622 2168626 YY1 TRANSFAC yes 112053120
SNP sites on vista28204[chr19:2168320-2168637]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 2168366 rs142788047 C G
EBF1 POLR2A RELA RUNX3
5381904
chr19 2168411 rs545190736 C T
EBF1 NR2C2 POLR2A RELA RUNX3 TFAP2A TFAP2B TFAP2C
5381905
chr19 2168500 rs146017256 T G
EBF1 POLR2A RELA RUNX3
5381906
chr19 2168509 rs77769171 C G,T
EBF1 ETS1 POLR2A RELA RUNX3 SPI1
5381907
chr19 2168515 rs58059306 G A
EBF1 POLR2A RELA RUNX3
5381908
chr19 2168540 rs78069541 G C
CTCF EBF1 POLR2A RELA RUNX3
5381909
chr19 2168611 rs185397213 C T
EBF1 POLR2A RELA RPC155 RUNX3
5381910
chr19 2168612 rs12983458 A G
EBF1 POLR2A RELA RPC155 RUNX3
5381911
Genes possibly regulated by vista28204[chr19:2168320-2168637]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 2071037 2096672 - MOB3A ENSG00000172081.9 2096672 0.72 1.0 16770 28352
chr19 2096380 2099592 + IZUMO4 ENSG00000099840.9 2096380 0.82 1.0 16771 28060
chr19 2100988 2164464 - AP3D1 ENSG00000065000.11 2164464 0.64 1.0 16772 96144
chr19 2164148 2232577 + DOT1L ENSG00000104885.13 2164148 0.75 1.0 16773 95828
chr19 2230002 2237703 - PLEKHJ1 ENSG00000104886.5 2237703 0.61 1.0 16774 30934
chr19 2236520 2248678 + SF3A2 ENSG00000104897.5 2236520 0.74 1.0 16775 32117
chr19 2249308 2252072 + AMH ENSG00000104899.4 2249308 0.78 1.0 16776 19329
Expression level of Genes
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miRNAs possibly regulated by vista28204[chr19:2168320-2168637]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results