EnhancerDB
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  3. vista28206[chr19:2171377-2171588]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28206[chr19:2171377-2171588]
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Tissue distribution of vista28206
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Transcription factor that possibly regulate vista28206[chr19:2171377-2171588]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 2171232 2171812 CTCF UCSC Txn Factor no Conserved 108359148
chr19 2171232 2171812 CTCF UCSC Txn Factor no Conserved 108359149
chr19 2171262 2171682 RELA UCSC Txn Factor no Conserved 108359165
chr19 2171262 2171682 RELA UCSC Txn Factor no Conserved 108359166
chr19 2171264 2171706 EBF1 UCSC Txn Factor no Conserved 108359167
chr19 2171264 2171706 EBF1 UCSC Txn Factor no Conserved 108359168
chr19 2171295 2171715 RUNX3 UCSC Txn Factor no Conserved 108359201
chr19 2171295 2171715 RUNX3 UCSC Txn Factor no Conserved 108359202
chr19 2171306 2171647 ATF2 UCSC Txn Factor no Conserved 108359212
chr19 2171306 2171647 ATF2 UCSC Txn Factor no Conserved 108359213
chr19 2171325 2171591 TCF12 UCSC Txn Factor no Conserved 108359232
chr19 2171332 2171619 BCL3 UCSC Txn Factor no Conserved 108359247
chr19 2171406 2171416 MYF6 JASPAR yes 70782580
chr19 2171406 2171416 MYF6 JASPAR yes 112053488
chr19 2171422 2171442 ESR1 JASPAR yes 70782581
chr19 2171422 2171442 ESR1 JASPAR yes 112053489
chr19 2171425 2171443 ESR1 JASPAR yes 70782582
chr19 2171425 2171443 ESR1 JASPAR yes 112053490
chr19 2171434 2171449 TFAP2A JASPAR yes 70782583
chr19 2171434 2171449 TFAP2C JASPAR yes 70782584
chr19 2171434 2171449 TFAP2A JASPAR yes 112053491
chr19 2171434 2171449 TFAP2C JASPAR yes 112053492
chr19 2171435 2171441 NFE2 TRANSFAC yes 70782585
chr19 2171435 2171441 NFE2 TRANSFAC yes 112053493
chr19 2171435 2171454 CTCF JASPAR yes 70782586
chr19 2171435 2171454 CTCF JASPAR yes 112053494
chr19 2171436 2171448 TFAP2A JASPAR yes 70782587
chr19 2171436 2171448 TFAP2B JASPAR yes 70782588
chr19 2171436 2171448 TFAP2C JASPAR yes 70782589
chr19 2171436 2171448 TFAP2A JASPAR yes 112053495
chr19 2171436 2171448 TFAP2B JASPAR yes 112053496
chr19 2171436 2171448 TFAP2C JASPAR yes 112053497
chr19 2171436 2171449 TFAP2A JASPAR yes 70782590
chr19 2171436 2171449 TFAP2B JASPAR yes 70782591
chr19 2171436 2171449 TFAP2C JASPAR yes 70782592
chr19 2171436 2171449 TFAP2A JASPAR yes 112053498
chr19 2171436 2171449 TFAP2B JASPAR yes 112053499
chr19 2171436 2171449 TFAP2C JASPAR yes 112053500
chr19 2171436 2171450 EBF1 JASPAR yes 70782593
chr19 2171436 2171450 EBF1 JASPAR yes 112053501
chr19 2171436 2171451 TFAP2A JASPAR yes 70782594
chr19 2171436 2171451 TFAP2A JASPAR yes 112053502
chr19 2171437 2171448 EBF1 JASPAR yes 70782595
chr19 2171437 2171448 EBF1 JASPAR yes 112053503
chr19 2171437 2171451 EBF1 JASPAR yes 70782596
chr19 2171437 2171451 EBF1 JASPAR yes 112053504
chr19 2171439 2171450 EBF1 JASPAR yes 70782597
chr19 2171439 2171450 EBF1 JASPAR yes 112053505
chr19 2171443 2171462 CTCF JASPAR yes 70782598
chr19 2171443 2171462 CTCF JASPAR yes 112053506
chr19 2171447 2171457 FIGLA JASPAR yes 70782599
chr19 2171447 2171457 ID4 JASPAR yes 70782600
chr19 2171447 2171457 MSC JASPAR yes 70782601
chr19 2171447 2171457 TCF3 JASPAR yes 70782602
chr19 2171447 2171457 TCF4 JASPAR yes 70782603
chr19 2171447 2171457 FIGLA JASPAR yes 112053507
chr19 2171447 2171457 ID4 JASPAR yes 112053508
chr19 2171447 2171457 MSC JASPAR yes 112053509
chr19 2171447 2171457 TCF3 JASPAR yes 112053510
chr19 2171447 2171457 TCF4 JASPAR yes 112053511
chr19 2171449 2171454 USF2 TRANSFAC yes 70782604
chr19 2171449 2171454 USF2 TRANSFAC yes 112053512
chr19 2171459 2171469 SMAD3 JASPAR yes 70782605
chr19 2171459 2171469 SMAD3 JASPAR yes 112053513
chr19 2171471 2171481 RUNX3 JASPAR yes 70782606
chr19 2171471 2171481 RUNX3 JASPAR yes 112053514
chr19 2171472 2171481 RUNX2 JASPAR yes 70782607
chr19 2171472 2171481 RUNX2 JASPAR yes 112053515
chr19 2171491 2171496 SP1 TRANSFAC yes 70782608
chr19 2171491 2171496 SP1 TRANSFAC yes 112053516
chr19 2171495 2171506 NFKB1 JASPAR yes 70782609
chr19 2171495 2171506 NFKB1 JASPAR yes 112053517
chr19 2171496 2171501 ETS2 TRANSFAC yes 70782610
chr19 2171496 2171501 ETS2 TRANSFAC yes 112053518
chr19 2171496 2171506 RELA JASPAR yes 70782611
chr19 2171496 2171506 RELA JASPAR yes 112053519
chr19 2171529 2171540 TFAP2A JASPAR yes 70782612
chr19 2171529 2171540 TFAP2C JASPAR yes 70782613
chr19 2171529 2171540 TFAP2A JASPAR yes 112053520
chr19 2171529 2171540 TFAP2C JASPAR yes 112053521
chr19 2171533 2171546 NFKB1 JASPAR yes 70782614
chr19 2171533 2171546 NFKB2 JASPAR yes 70782615
chr19 2171533 2171546 NFKB1 JASPAR yes 112053522
chr19 2171533 2171546 NFKB2 JASPAR yes 112053523
chr19 2171534 2171545 NFKB1 JASPAR yes 70782616
chr19 2171534 2171545 NFKB1 JASPAR yes 112053524
chr19 2171535 2171539 LFA1 TRANSFAC yes 70782617
chr19 2171535 2171539 LFA1 TRANSFAC yes 112053525
chr19 2171535 2171545 NFKB1 JASPAR yes 70782618
chr19 2171535 2171545 NFKB1 JASPAR yes 112053526
chr19 2171542 2171554 ZBTB7C JASPAR yes 70782619
chr19 2171542 2171554 ZBTB7C JASPAR yes 112053527
chr19 2171552 2171558 SP1 TRANSFAC yes 70782620
chr19 2171552 2171558 SP1 TRANSFAC yes 112053528
chr19 2171553 2171558 SP1 TRANSFAC yes 70782621
chr19 2171553 2171558 SP1 TRANSFAC yes 112053529
chr19 2171554 2171559 SP1 TRANSFAC yes 70782622
chr19 2171554 2171559 SP1 TRANSFAC yes 112053530
chr19 2171572 2171582 MSC JASPAR yes 70782623
chr19 2171572 2171582 MSC JASPAR yes 112053531
chr19 2171580 2171594 TCF7L2 JASPAR yes 70782624
chr19 2171580 2171594 TCF7L2 JASPAR yes 112053532
SNP sites on vista28206[chr19:2171377-2171588]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 2171490 rs1015670 G A
ATF2 BCL3 CTCF EBF1 RELA RUNX3 TCF12
5381963
chr19 2171570 rs150805480 G C,T
ATF2 BCL3 CTCF EBF1 RELA RUNX3 TCF12
5381964
Genes possibly regulated by vista28206[chr19:2171377-2171588]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 2071037 2096672 - MOB3A ENSG00000172081.9 2096672 0.72 1.0 16770 25295
chr19 2096380 2099592 + IZUMO4 ENSG00000099840.9 2096380 0.82 1.0 16771 25003
chr19 2100988 2164464 - AP3D1 ENSG00000065000.11 2164464 0.64 1.0 16772 93087
chr19 2164148 2232577 + DOT1L ENSG00000104885.13 2164148 0.75 1.0 16773 92771
chr19 2230002 2237703 - PLEKHJ1 ENSG00000104886.5 2237703 0.61 1.0 16774 33885
chr19 2236520 2248678 + SF3A2 ENSG00000104897.5 2236520 0.74 1.0 16775 35068
chr19 2249308 2252072 + AMH ENSG00000104899.4 2249308 0.78 1.0 16776 22280
chr19 2252251 2269758 - JSRP1 ENSG00000167476.6 2269758 0.94 1.0 16777 1830
chr19 2269485 2273487 + OAZ1 ENSG00000104904.8 2269485 0.56 1.0 16778 2103
Expression level of Genes
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miRNAs possibly regulated by vista28206[chr19:2171377-2171588]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results