EnhancerDB
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  3. vista28208[chr19:2182828-2183132]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28208[chr19:2182828-2183132]
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Tissue distribution of vista28208
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Transcription factor that possibly regulate vista28208[chr19:2182828-2183132]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 2182910 2183274 EBF1 UCSC Txn Factor no Conserved 108359452
chr19 2182911 2183235 RUNX3 UCSC Txn Factor no Conserved 108359454
chr19 2182965 2183210 SPI1 UCSC Txn Factor no Conserved 108359460
chr19 2182848 2182852 NFE TRANSFAC yes 70782677
chr19 2182848 2182852 NFE TRANSFAC yes 112054739
chr19 2182866 2182881 FOXP1 JASPAR yes 70782678
chr19 2182866 2182881 FOXP1 JASPAR yes 112054740
chr19 2182867 2182878 FOXP2 JASPAR yes 70782679
chr19 2182867 2182878 FOXP2 JASPAR yes 112054741
chr19 2182869 2182886 BCL6B JASPAR yes 70782680
chr19 2182869 2182886 BCL6B JASPAR yes 112054742
chr19 2182876 2182881 TFAP2A TRANSFAC yes 70782681
chr19 2182876 2182881 TFAP2A TRANSFAC yes 112054743
chr19 2182876 2182882 MZF1 JASPAR yes 70782682
chr19 2182876 2182882 MZF1 JASPAR yes 112054744
chr19 2182882 2182895 ZBTB18 JASPAR yes 70782683
chr19 2182882 2182895 ZBTB18 JASPAR yes 112054745
chr19 2182913 2182928 HNF4G JASPAR yes 70782684
chr19 2182913 2182928 HNF4G JASPAR yes 112054746
chr19 2182914 2182928 NR2F1 JASPAR yes 70782685
chr19 2182914 2182928 NR2F1 JASPAR yes 112054747
chr19 2182914 2182929 HNF4A JASPAR yes 70782686
chr19 2182914 2182929 HNF4A JASPAR yes 112054748
chr19 2182922 2182926 H4TF2 TRANSFAC yes 70782687
chr19 2182922 2182926 H4TF2 TRANSFAC yes 112054749
chr19 2182945 2182958 ZBTB18 JASPAR yes 70782688
chr19 2182945 2182958 ZBTB18 JASPAR yes 112054750
chr19 2182946 2182956 FIGLA JASPAR yes 70782689
chr19 2182946 2182956 ID4 JASPAR yes 70782690
chr19 2182946 2182956 TCF3 JASPAR yes 70782691
chr19 2182946 2182956 TCF4 JASPAR yes 70782692
chr19 2182946 2182956 FIGLA JASPAR yes 112054751
chr19 2182946 2182956 ID4 JASPAR yes 112054752
chr19 2182946 2182956 TCF3 JASPAR yes 112054753
chr19 2182946 2182956 TCF4 JASPAR yes 112054754
chr19 2182948 2182953 USF2 TRANSFAC yes 70782693
chr19 2182948 2182953 USF2 TRANSFAC yes 112054755
chr19 2182950 2182959 HIC2 JASPAR yes 70782694
chr19 2182950 2182959 HIC2 JASPAR yes 112054756
chr19 2182952 2182963 NRF1 JASPAR yes 70782695
chr19 2182952 2182963 NRF1 JASPAR yes 112054757
chr19 2182953 2182957 LFA1 TRANSFAC yes 70782696
chr19 2182953 2182957 LFA1 TRANSFAC yes 112054758
chr19 2182996 2183006 FIGLA JASPAR yes 70782697
chr19 2182996 2183006 TCF3 JASPAR yes 70782698
chr19 2182996 2183006 FIGLA JASPAR yes 112054759
chr19 2182996 2183006 TCF3 JASPAR yes 112054760
chr19 2182998 2183003 USF2 TRANSFAC yes 70782699
chr19 2182998 2183003 USF2 TRANSFAC yes 112054761
chr19 2183027 2183033 MZF1 JASPAR yes 70782700
chr19 2183027 2183033 MZF1 JASPAR yes 112054762
chr19 2183029 2183043 ZIC1 JASPAR yes 70782701
chr19 2183029 2183043 ZIC1 JASPAR yes 112054763
chr19 2183032 2183043 USF1 JASPAR yes 70782702
chr19 2183032 2183043 USF2 JASPAR yes 70782703
chr19 2183032 2183043 USF1 JASPAR yes 112054764
chr19 2183032 2183043 USF2 JASPAR yes 112054765
chr19 2183033 2183054 REST JASPAR yes 70782704
chr19 2183033 2183054 REST JASPAR yes 112054766
chr19 2183034 2183049 RFX5 JASPAR yes 70782705
chr19 2183034 2183049 RFX5 JASPAR yes 112054767
chr19 2183071 2183092 ZNF263 JASPAR yes 70782706
chr19 2183071 2183092 ZNF263 JASPAR yes 112054768
chr19 2183073 2183094 IRF1 JASPAR yes 70782707
chr19 2183073 2183094 IRF1 JASPAR yes 112054769
chr19 2183076 2183080 NFE TRANSFAC yes 70782708
chr19 2183076 2183080 NFE TRANSFAC yes 112054770
chr19 2183076 2183090 JUN JASPAR yes 70782709
chr19 2183076 2183090 JUN JASPAR yes 112054771
chr19 2183081 2183092 ELK4 JASPAR yes 70782710
chr19 2183081 2183092 FLI1 JASPAR yes 70782711
chr19 2183081 2183092 ELK4 JASPAR yes 112054772
chr19 2183081 2183092 FLI1 JASPAR yes 112054773
chr19 2183082 2183092 ETV6 JASPAR yes 70782712
chr19 2183082 2183092 GABPA JASPAR yes 70782713
chr19 2183082 2183092 ETV6 JASPAR yes 112054774
chr19 2183082 2183092 GABPA JASPAR yes 112054775
chr19 2183082 2183093 ELF5 JASPAR yes 70782714
chr19 2183082 2183093 ELF5 JASPAR yes 112054776
chr19 2183082 2183095 ELF1 JASPAR yes 70782715
chr19 2183082 2183095 ELF1 JASPAR yes 112054777
chr19 2183083 2183090 SPI1 JASPAR yes 70782716
chr19 2183083 2183090 SPI1 JASPAR yes 112054778
chr19 2183083 2183091 EHF JASPAR yes 70782717
chr19 2183083 2183091 EHF JASPAR yes 112054779
chr19 2183085 2183092 SPIB JASPAR yes 70782718
chr19 2183085 2183092 SPIB JASPAR yes 112054780
chr19 2183114 2183125 FOXA1 JASPAR yes 70782719
chr19 2183114 2183125 FOXA1 JASPAR yes 112054781
chr19 2183114 2183129 FOXA1 JASPAR yes 70782720
chr19 2183114 2183129 FOXA1 JASPAR yes 112054782
SNP sites on vista28208[chr19:2182828-2183132]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 2182874 rs191107730 T G
BCL6B FOXP1 FOXP2
5382162
chr19 2182915 rs77030691 G T
EBF1 HNF4A HNF4G NR2F1 RUNX3
5382163
chr19 2182964 rs117962942 G A
EBF1 RUNX3
5382164
chr19 2182967 rs116911021 G A
EBF1 RUNX3 SPI1
5382165
chr19 2183000 rs12609327 A C
EBF1 FIGLA RUNX3 SPI1 TCF3 USF2
5382166
Genes possibly regulated by vista28208[chr19:2182828-2183132]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 2071037 2096672 - MOB3A ENSG00000172081.9 2096672 0.72 1.0 16770 13844
chr19 2096380 2099592 + IZUMO4 ENSG00000099840.9 2096380 0.82 1.0 16771 13552
chr19 2100988 2164464 - AP3D1 ENSG00000065000.11 2164464 0.64 1.0 16772 81636
chr19 2164148 2232577 + DOT1L ENSG00000104885.13 2164148 0.75 1.0 16773 81320
chr19 2230002 2237703 - PLEKHJ1 ENSG00000104886.5 2237703 0.61 1.0 16774 45429
chr19 2236520 2248678 + SF3A2 ENSG00000104897.5 2236520 0.74 1.0 16775 46612
chr19 2249308 2252072 + AMH ENSG00000104899.4 2249308 0.78 1.0 16776 33824
chr19 2252251 2269758 - JSRP1 ENSG00000167476.6 2269758 0.94 1.0 16777 13374
chr19 2269485 2273487 + OAZ1 ENSG00000104904.8 2269485 0.56 1.0 16778 13647
chr19 2274631 2282181 - C19orf35 ENSG00000188305.4 2282181 0.95 1.0 16779 951
Expression level of Genes
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miRNAs possibly regulated by vista28208[chr19:2182828-2183132]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results