EnhancerDB
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  3. vista28212[chr19:2266489-2266732]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28212[chr19:2266489-2266732]
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Tissue distribution of vista28212
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Transcription factor that possibly regulate vista28212[chr19:2266489-2266732]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 2266438 2266897 MAX UCSC Txn Factor no Conserved 108359632
chr19 2266455 2266887 MYC UCSC Txn Factor no Conserved 108359645
chr19 2266553 2266809 USF1 UCSC Txn Factor no Conserved 108359685
chr19 2266582 2266788 EGR1 UCSC Txn Factor no Conserved 108359695
chr19 2266612 2266876 SPI1 UCSC Txn Factor no Conserved 108359707
chr19 2266501 2266512 EBF1 JASPAR yes 70782852
chr19 2266501 2266512 EBF1 JASPAR yes 112056957
chr19 2266520 2266535 PRDM1 JASPAR yes 70782853
chr19 2266520 2266535 PRDM1 JASPAR yes 112056958
chr19 2266524 2266543 REST JASPAR yes 70782854
chr19 2266524 2266543 REST JASPAR yes 112056959
chr19 2266536 2266540 NFE TRANSFAC yes 70782855
chr19 2266536 2266540 NFE TRANSFAC yes 112056960
chr19 2266567 2266573 MZF1 JASPAR yes 70782856
chr19 2266567 2266573 MZF1 JASPAR yes 112056961
chr19 2266570 2266589 REST JASPAR yes 70782857
chr19 2266570 2266589 REST JASPAR yes 112056962
chr19 2266594 2266605 EBF1 JASPAR yes 70782858
chr19 2266594 2266605 EBF1 JASPAR yes 112056963
chr19 2266598 2266603 TFAP2A TRANSFAC yes 70782859
chr19 2266598 2266603 TFAP2A TRANSFAC yes 112056964
chr19 2266598 2266604 MZF1 JASPAR yes 70782860
chr19 2266598 2266604 MZF1 JASPAR yes 112056965
chr19 2266599 2266618 RFX2 JASPAR yes 70782861
chr19 2266599 2266618 RFX2 JASPAR yes 112056966
chr19 2266609 2266614 TFAP2A TRANSFAC yes 70782862
chr19 2266609 2266614 TFAP2A TRANSFAC yes 112056967
chr19 2266609 2266615 MZF1 JASPAR yes 70782863
chr19 2266609 2266615 MZF1 JASPAR yes 112056968
chr19 2266620 2266630 TCF4 JASPAR yes 70782864
chr19 2266620 2266630 TCF4 JASPAR yes 112056969
chr19 2266622 2266631 ZEB1 JASPAR yes 70782865
chr19 2266622 2266631 ZEB1 JASPAR yes 112056970
chr19 2266624 2266629 SP1 TRANSFAC yes 70782866
chr19 2266624 2266629 SP1 TRANSFAC yes 112056971
chr19 2266638 2266650 NHLH1 JASPAR yes 70782867
chr19 2266638 2266650 NHLH1 JASPAR yes 112056972
chr19 2266641 2266646 MYC TRANSFAC yes 70782868
chr19 2266641 2266646 MYC TRANSFAC yes 112056973
chr19 2266664 2266674 HEY1 JASPAR yes 70782869
chr19 2266664 2266674 HEY2 JASPAR yes 70782870
chr19 2266664 2266674 MAX JASPAR yes 70782871
chr19 2266664 2266674 MNT JASPAR yes 70782872
chr19 2266664 2266674 HEY1 JASPAR yes 112056974
chr19 2266664 2266674 HEY2 JASPAR yes 112056975
chr19 2266664 2266674 MAX JASPAR yes 112056976
chr19 2266664 2266674 MNT JASPAR yes 112056977
chr19 2266664 2266675 USF1 JASPAR yes 70782873
chr19 2266664 2266675 USF2 JASPAR yes 70782874
chr19 2266664 2266675 USF1 JASPAR yes 112056978
chr19 2266664 2266675 USF2 JASPAR yes 112056979
chr19 2266665 2266672 USF1 JASPAR yes 70782875
chr19 2266665 2266672 USF1 JASPAR yes 112056980
chr19 2266665 2266675 MAX JASPAR yes 70782876
chr19 2266665 2266675 MAX JASPAR yes 112056981
chr19 2266666 2266671 MYC TRANSFAC yes 70782877
chr19 2266666 2266671 USF1 TRANSFAC yes 70782878
chr19 2266666 2266671 USF2 TRANSFAC yes 70782879
chr19 2266666 2266671 MYC TRANSFAC yes 112056982
chr19 2266666 2266671 USF1 TRANSFAC yes 112056983
chr19 2266666 2266671 USF2 TRANSFAC yes 112056984
chr19 2266666 2266673 USF1 JASPAR yes 70782880
chr19 2266666 2266673 USF1 JASPAR yes 112056985
chr19 2266681 2266691 ZNF740 JASPAR yes 70782881
chr19 2266681 2266691 ZNF740 JASPAR yes 112056986
chr19 2266683 2266693 ZNF740 JASPAR yes 70782882
chr19 2266683 2266693 ZNF740 JASPAR yes 112056987
chr19 2266691 2266704 HSF2 JASPAR yes 70782883
chr19 2266691 2266704 HSF2 JASPAR yes 112056988
chr19 2266695 2266710 HSF1 JASPAR yes 70782884
chr19 2266695 2266710 HSF1 JASPAR yes 112056989
chr19 2266696 2266709 HSF1 JASPAR yes 70782885
chr19 2266696 2266709 HSF2 JASPAR yes 70782886
chr19 2266696 2266709 HSF4 JASPAR yes 70782887
chr19 2266696 2266709 HSF1 JASPAR yes 112056990
chr19 2266696 2266709 HSF2 JASPAR yes 112056991
chr19 2266696 2266709 HSF4 JASPAR yes 112056992
chr19 2266715 2266721 NFIC JASPAR yes 70782888
chr19 2266715 2266721 NFIC JASPAR yes 112056993
chr19 2266715 2266729 TLX1 JASPAR yes 70782889
chr19 2266715 2266729 TLX1 JASPAR yes 112056994
chr19 2266716 2266730 TLX1 JASPAR yes 70782890
chr19 2266716 2266730 TLX1 JASPAR yes 112056995
chr19 2266720 2266725 SP1 TRANSFAC yes 70782891
chr19 2266720 2266725 SP1 TRANSFAC yes 112056996
chr19 2266723 2266742 CTCF JASPAR yes 70782892
chr19 2266723 2266742 CTCF JASPAR yes 112056997
chr19 2266725 2266731 YY1 JASPAR yes 70782893
chr19 2266725 2266731 YY1 JASPAR yes 112056998
chr19 2266732 2266753 ZNF263 JASPAR yes 70782894
chr19 2266732 2266753 ZNF263 JASPAR yes 112056999
SNP sites on vista28212[chr19:2266489-2266732]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 2266524 rs150715543 C T
MAX MYC PRDM1 REST
5382595
chr19 2266542 rs561297582 C T
MAX MYC REST
5382596
chr19 2266556 rs139048616 C T
MAX MYC USF1
5382597
chr19 2266568 rs149844423 T A
MAX MYC MZF1 USF1
5382598
chr19 2266608 rs10426208 T C
EGR1 MAX MYC RFX2 USF1
5382599
chr19 2266616 rs116509093 A G
EGR1 MAX MYC RFX2 SPI1 USF1
5382600
chr19 2266620 rs12976002 G A
EGR1 MAX MYC SPI1 TCF4 USF1
5382601
chr19 2266641 rs10418357 G A
EGR1 MAX MYC NHLH1 SPI1 USF1
5382602
chr19 2266669 rs542284989 C T
EGR1 HEY1 HEY2 MAX MNT MYC SPI1 USF1 USF2
5382603
Genes possibly regulated by vista28212[chr19:2266489-2266732]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 2230002 2237703 - PLEKHJ1 ENSG00000104886.5 2237703 0.61 1.0 16774 71214
chr19 2236520 2248678 + SF3A2 ENSG00000104897.5 2236520 0.74 1.0 16775 70031
chr19 2249308 2252072 + AMH ENSG00000104899.4 2249308 0.78 1.0 16776 82819
chr19 2252251 2269758 - JSRP1 ENSG00000167476.6 2269758 0.94 1.0 16777 96974
chr19 2269485 2273487 + OAZ1 ENSG00000104904.8 2269485 0.56 1.0 16778 97247
chr19 2274631 2282181 - C19orf35 ENSG00000188305.4 2282181 0.95 1.0 16779 84551
chr19 2289774 2308156 - LINGO3 ENSG00000220008.2 2308156 0.97 1.0 16780 58576
chr19 2321516 2328619 - LSM7 ENSG00000130332.10 2328619 0.75 1.0 16781 38113
Expression level of Genes
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miRNAs possibly regulated by vista28212[chr19:2266489-2266732]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results