EnhancerDB
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  3. vista28213[chr19:2287726-2288039]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28213[chr19:2287726-2288039]
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Tissue distribution of vista28213
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Transcription factor that possibly regulate vista28213[chr19:2287726-2288039]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 2287759 2287763 YY1 TRANSFAC yes 70782895
chr19 2287766 2287779 JUN JASPAR yes 70782896
chr19 2287786 2287798 ZBTB7B JASPAR yes 70782897
chr19 2287802 2287814 NHLH1 JASPAR yes 70782898
chr19 2287803 2287813 TFAP4 JASPAR yes 70782899
chr19 2287824 2287828 LFA1 TRANSFAC yes 70782900
chr19 2287851 2287860 THAP1 JASPAR yes 70782901
chr19 2287851 2287863 E2F8 JASPAR yes 70782902
chr19 2287861 2287875 GLIS3 JASPAR yes 70782903
chr19 2287874 2287878 NFE TRANSFAC yes 70782904
chr19 2287880 2287883 MYB TRANSFAC yes 70782905
chr19 2287887 2287901 TLX1 JASPAR yes 70782906
chr19 2287888 2287902 TLX1 JASPAR yes 70782907
chr19 2287891 2287897 NFIC JASPAR yes 70782908
chr19 2287907 2287926 REST JASPAR yes 70782909
chr19 2287929 2287939 MYF6 JASPAR yes 70782910
chr19 2287940 2287944 NFE TRANSFAC yes 70782911
chr19 2287943 2287953 SP1 JASPAR yes 70782912
chr19 2287944 2287954 SP1 JASPAR yes 70782913
chr19 2287946 2287952 NFE2 TRANSFAC yes 70782914
chr19 2287947 2287959 INSM1 JASPAR yes 70782915
chr19 2287947 2287961 GLIS2 JASPAR yes 70782916
chr19 2287964 2287967 MYB TRANSFAC yes 70782917
chr19 2287965 2287984 CTCF JASPAR yes 70782918
chr19 2287967 2287971 NFE TRANSFAC yes 70782919
chr19 2287971 2287982 EBF1 JASPAR yes 70782920
chr19 2287976 2287997 ZNF263 JASPAR yes 70782921
chr19 2287977 2287984 PEA3 TRANSFAC yes 70782922
chr19 2287979 2288000 ZNF263 JASPAR yes 70782923
chr19 2287987 2287997 SP1 JASPAR yes 70782924
chr19 2287989 2287995 MAZ TRANSFAC yes 70782925
chr19 2287990 2288000 MZF1 JASPAR yes 70782926
chr19 2287994 2287998 LFA1 TRANSFAC yes 70782927
chr19 2287998 2288013 AR JASPAR yes 70782928
chr19 2288021 2288025 ESR1 TRANSFAC yes 70782929
chr19 2288024 2288036 TAL1 JASPAR yes 70782930
chr19 2288031 2288035 H4TF2 TRANSFAC yes 70782931
SNP sites on vista28213[chr19:2287726-2288039]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 2287875 rs569006695 C G
GLIS3 NFE
5382793
chr19 2287933 rs554660149 A C
MYF6
5382794
Genes possibly regulated by vista28213[chr19:2287726-2288039]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 2230002 2237703 - PLEKHJ1 ENSG00000104886.5 2237703 0.61 1.0 16774 49977
chr19 2236520 2248678 + SF3A2 ENSG00000104897.5 2236520 0.74 1.0 16775 48794
chr19 2249308 2252072 + AMH ENSG00000104899.4 2249308 0.78 1.0 16776 61582
chr19 2252251 2269758 - JSRP1 ENSG00000167476.6 2269758 0.94 1.0 16777 82032
chr19 2269485 2273487 + OAZ1 ENSG00000104904.8 2269485 0.56 1.0 16778 81759
chr19 2274631 2282181 - C19orf35 ENSG00000188305.4 2282181 0.95 1.0 16779 94455
chr19 2289774 2308156 - LINGO3 ENSG00000220008.2 2308156 0.97 1.0 16780 79883
chr19 2321516 2328619 - LSM7 ENSG00000130332.10 2328619 0.75 1.0 16781 59420
Expression level of Genes
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miRNAs possibly regulated by vista28213[chr19:2287726-2288039]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results