EnhancerDB
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  3. vista28216[chr19:2391233-2391395]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28216[chr19:2391233-2391395]
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Tissue distribution of vista28216
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Transcription factor that possibly regulate vista28216[chr19:2391233-2391395]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 2391271 2391653 CTCF UCSC Txn Factor no Conserved 108359932
chr19 2391272 2391730 MAX UCSC Txn Factor no Conserved 108359934
chr19 2391311 2391601 SMC3 UCSC Txn Factor no Conserved 108359953
chr19 2391315 2391581 RAD21 UCSC Txn Factor no Conserved 108359955
chr19 2391232 2391247 FOXP1 JASPAR yes 70783013
chr19 2391232 2391247 FOXP1 JASPAR yes 112061906
chr19 2391233 2391248 FOXP1 JASPAR yes 70783014
chr19 2391233 2391248 FOXP1 JASPAR yes 112061907
chr19 2391234 2391249 FOXP1 JASPAR yes 70783015
chr19 2391234 2391249 FOXP1 JASPAR yes 112061908
chr19 2391234 2391255 IRF1 JASPAR yes 70783016
chr19 2391234 2391255 IRF1 JASPAR yes 112061909
chr19 2391235 2391250 FOXP1 JASPAR yes 70783017
chr19 2391235 2391250 FOXP1 JASPAR yes 112061910
chr19 2391235 2391256 IRF1 JASPAR yes 70783018
chr19 2391235 2391256 IRF1 JASPAR yes 112061911
chr19 2391236 2391251 FOXP1 JASPAR yes 70783019
chr19 2391236 2391251 FOXP1 JASPAR yes 112061912
chr19 2391236 2391257 IRF1 JASPAR yes 70783020
chr19 2391236 2391257 IRF1 JASPAR yes 112061913
chr19 2391237 2391252 FOXP1 JASPAR yes 70783021
chr19 2391237 2391252 FOXP1 JASPAR yes 112061914
chr19 2391237 2391258 IRF1 JASPAR yes 70783022
chr19 2391237 2391258 IRF1 JASPAR yes 112061915
chr19 2391238 2391253 FOXP1 JASPAR yes 70783023
chr19 2391238 2391253 FOXP1 JASPAR yes 112061916
chr19 2391238 2391259 IRF1 JASPAR yes 70783024
chr19 2391238 2391259 IRF1 JASPAR yes 112061917
chr19 2391239 2391254 FOXP1 JASPAR yes 70783025
chr19 2391239 2391254 FOXP1 JASPAR yes 112061918
chr19 2391239 2391260 IRF1 JASPAR yes 70783026
chr19 2391239 2391260 IRF1 JASPAR yes 112061919
chr19 2391240 2391255 FOXP1 JASPAR yes 70783027
chr19 2391240 2391255 FOXP1 JASPAR yes 112061920
chr19 2391240 2391261 IRF1 JASPAR yes 70783028
chr19 2391240 2391261 IRF1 JASPAR yes 112061921
chr19 2391241 2391256 FOXP1 JASPAR yes 70783029
chr19 2391241 2391256 FOXP1 JASPAR yes 112061922
chr19 2391242 2391257 FOXP1 JASPAR yes 70783030
chr19 2391242 2391257 FOXP1 JASPAR yes 112061923
chr19 2391242 2391263 IRF1 JASPAR yes 70783031
chr19 2391242 2391263 IRF1 JASPAR yes 112061924
chr19 2391243 2391258 FOXP1 JASPAR yes 70783032
chr19 2391243 2391258 FOXP1 JASPAR yes 112061925
chr19 2391246 2391261 PRDM1 JASPAR yes 70783033
chr19 2391246 2391261 STAT2 JASPAR yes 70783034
chr19 2391246 2391261 PRDM1 JASPAR yes 112061926
chr19 2391246 2391261 STAT2 JASPAR yes 112061927
chr19 2391255 2391270 MEF2A JASPAR yes 70783035
chr19 2391255 2391270 MEF2A JASPAR yes 112061928
chr19 2391256 2391271 MEF2C JASPAR yes 70783036
chr19 2391256 2391271 MEF2C JASPAR yes 112061929
chr19 2391257 2391269 MEF2A JASPAR yes 70783037
chr19 2391257 2391269 MEF2A JASPAR yes 112061930
chr19 2391265 2391268 MYB TRANSFAC yes 70783038
chr19 2391265 2391268 MYB TRANSFAC yes 112061931
chr19 2391268 2391272 YY1 TRANSFAC yes 70783039
chr19 2391268 2391272 YY1 TRANSFAC yes 112061932
chr19 2391279 2391293 FOXF2 JASPAR yes 70783040
chr19 2391279 2391293 FOXF2 JASPAR yes 112061933
chr19 2391280 2391291 HOXA10 JASPAR yes 70783041
chr19 2391280 2391291 HOXA10 JASPAR yes 112061934
chr19 2391282 2391293 FOXP2 JASPAR yes 70783042
chr19 2391282 2391293 FOXP2 JASPAR yes 112061935
chr19 2391282 2391294 FOXI1 JASPAR yes 70783043
chr19 2391282 2391294 FOXI1 JASPAR yes 112061936
chr19 2391294 2391308 E2F7 JASPAR yes 70783044
chr19 2391294 2391308 E2F7 JASPAR yes 112061937
chr19 2391295 2391307 E2F8 JASPAR yes 70783045
chr19 2391295 2391307 E2F8 JASPAR yes 112061938
chr19 2391297 2391302 TFAP2A TRANSFAC yes 70783046
chr19 2391297 2391302 TFAP2A TRANSFAC yes 112061939
chr19 2391297 2391303 MZF1 JASPAR yes 70783047
chr19 2391297 2391303 MZF1 JASPAR yes 112061940
chr19 2391302 2391308 HiNF-A TRANSFAC yes 70783048
chr19 2391302 2391308 HiNF-A TRANSFAC yes 112061941
chr19 2391320 2391334 SPIC JASPAR yes 70783049
chr19 2391320 2391334 SPIC JASPAR yes 112061942
chr19 2391354 2391375 IRF1 JASPAR yes 70783050
chr19 2391354 2391375 IRF1 JASPAR yes 112061943
chr19 2391356 2391371 STAT2 JASPAR yes 70783051
chr19 2391356 2391371 STAT2 JASPAR yes 112061944
chr19 2391356 2391377 IRF1 JASPAR yes 70783052
chr19 2391356 2391377 IRF1 JASPAR yes 112061945
chr19 2391360 2391375 FOXP1 JASPAR yes 70783053
chr19 2391360 2391375 FOXP1 JASPAR yes 112061946
chr19 2391360 2391381 IRF1 JASPAR yes 70783054
chr19 2391360 2391381 IRF1 JASPAR yes 112061947
chr19 2391361 2391376 FOXP1 JASPAR yes 70783055
chr19 2391361 2391376 FOXP1 JASPAR yes 112061948
chr19 2391361 2391382 IRF1 JASPAR yes 70783056
chr19 2391361 2391382 IRF1 JASPAR yes 112061949
chr19 2391362 2391377 FOXP1 JASPAR yes 70783057
chr19 2391362 2391377 FOXP1 JASPAR yes 112061950
chr19 2391362 2391383 IRF1 JASPAR yes 70783058
chr19 2391362 2391383 IRF1 JASPAR yes 112061951
chr19 2391363 2391384 IRF1 JASPAR yes 70783059
chr19 2391363 2391384 IRF1 JASPAR yes 112061952
chr19 2391367 2391382 FOXP1 JASPAR yes 70783060
chr19 2391367 2391382 LEF1 JASPAR yes 70783061
chr19 2391367 2391382 FOXP1 JASPAR yes 112061953
chr19 2391367 2391382 LEF1 JASPAR yes 112061954
chr19 2391367 2391388 IRF1 JASPAR yes 70783062
chr19 2391367 2391388 IRF1 JASPAR yes 112061955
chr19 2391369 2391384 FOXP1 JASPAR yes 70783063
chr19 2391369 2391384 FOXP1 JASPAR yes 112061956
chr19 2391374 2391389 FOXP1 JASPAR yes 70783064
chr19 2391374 2391389 FOXP1 JASPAR yes 112061957
chr19 2391386 2391392 TBP TRANSFAC yes 70783065
chr19 2391386 2391392 TBP TRANSFAC yes 112061958
chr19 2391393 2391397 YY1 TRANSFAC yes 70783066
chr19 2391393 2391397 YY1 TRANSFAC yes 112061959
SNP sites on vista28216[chr19:2391233-2391395]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 2391305 rs4807252 A C
CTCF E2F7 E2F8 HiNF-A MAX
5383911
chr19 2391387 rs567732900 T A
CTCF FOXP1 IRF1 MAX RAD21 SMC3 TBP
5383912
chr19 2391388 rs4806843 A T
CTCF FOXP1 IRF1 MAX RAD21 SMC3 TBP
5383913
chr19 2391389 rs4806844 A T
CTCF FOXP1 MAX RAD21 SMC3 TBP
5383914
chr19 2391390 rs76777162 A T
CTCF MAX RAD21 SMC3 TBP
5383915
chr19 2391393 rs112489108 A G
CTCF MAX RAD21 SMC3 YY1
5383916
Genes possibly regulated by vista28216[chr19:2391233-2391395]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 2289774 2308156 - LINGO3 ENSG00000220008.2 2308156 0.97 1.0 16780 16923
chr19 2321516 2328619 - LSM7 ENSG00000130332.10 2328619 0.75 1.0 16781 37386
chr19 2389769 2426237 + TMPRSS9 ENSG00000178297.8 2389769 0.87 1.0 16782 98536
chr19 2425622 2427892 - TIMM13 ENSG00000099800.3 2427892 0.71 1.0 16783 63503
chr19 2427636 2456994 - LMNB2 ENSG00000176619.6 2456994 0.77 1.0 16784 34401
chr19 2476120 2478257 + GADD45B ENSG00000099860.4 2476120 0.77 1.0 16785 15275
Expression level of Genes
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miRNAs possibly regulated by vista28216[chr19:2391233-2391395]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results