EnhancerDB
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  3. vista28218[chr19:2394788-2394991]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28218[chr19:2394788-2394991]
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Tissue distribution of vista28218
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Transcription factor that possibly regulate vista28218[chr19:2394788-2394991]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 2394660 2394991 RUNX3 UCSC Txn Factor no Conserved 108360137
chr19 2394777 2394789 YY1 JASPAR yes 70783100
chr19 2394777 2394789 YY1 JASPAR yes 112062427
chr19 2394818 2394821 MYB TRANSFAC yes 70783101
chr19 2394818 2394821 MYB TRANSFAC yes 112062429
chr19 2394823 2394827 YY1 TRANSFAC yes 70783102
chr19 2394823 2394827 YY1 TRANSFAC yes 112062430
chr19 2394845 2394865 RREB1 JASPAR yes 70783103
chr19 2394845 2394865 RREB1 JASPAR yes 112062431
chr19 2394851 2394866 RUNX2 JASPAR yes 70783104
chr19 2394851 2394866 RUNX2 JASPAR yes 112062432
chr19 2394854 2394865 RUNX1 JASPAR yes 70783105
chr19 2394854 2394865 RUNX1 JASPAR yes 112062433
chr19 2394854 2394866 ZBTB7C JASPAR yes 70783106
chr19 2394854 2394866 ZBTB7C JASPAR yes 112062434
chr19 2394855 2394865 RUNX3 JASPAR yes 70783107
chr19 2394855 2394865 RUNX3 JASPAR yes 112062435
chr19 2394855 2394867 ZBTB7A JASPAR yes 70783108
chr19 2394855 2394867 ZBTB7A JASPAR yes 112062436
chr19 2394875 2394887 FOXI1 JASPAR yes 70783109
chr19 2394875 2394887 FOXI1 JASPAR yes 112062437
chr19 2394878 2394882 YY1 TRANSFAC yes 70783110
chr19 2394878 2394882 YY1 TRANSFAC yes 112062438
chr19 2394901 2394914 ATF4 JASPAR yes 70783111
chr19 2394901 2394914 ATF4 JASPAR yes 112062439
chr19 2394907 2394916 POU3F4 JASPAR yes 70783112
chr19 2394907 2394916 POU5F1B JASPAR yes 70783113
chr19 2394907 2394916 POU3F4 JASPAR yes 112062440
chr19 2394907 2394916 POU5F1B JASPAR yes 112062441
chr19 2394915 2394929 POU4F1 JASPAR yes 70783114
chr19 2394915 2394929 POU4F1 JASPAR yes 112062442
chr19 2394915 2394931 POU4F2 JASPAR yes 70783115
chr19 2394915 2394931 POU4F3 JASPAR yes 70783116
chr19 2394915 2394931 POU4F2 JASPAR yes 112062443
chr19 2394915 2394931 POU4F3 JASPAR yes 112062444
chr19 2394921 2394931 HOXA13 JASPAR yes 70783117
chr19 2394921 2394931 HOXC10 JASPAR yes 70783118
chr19 2394921 2394931 HOXD11 JASPAR yes 70783119
chr19 2394921 2394931 HOXD13 JASPAR yes 70783120
chr19 2394921 2394931 HOXA13 JASPAR yes 112062445
chr19 2394921 2394931 HOXC10 JASPAR yes 112062446
chr19 2394921 2394931 HOXD11 JASPAR yes 112062447
chr19 2394921 2394931 HOXD13 JASPAR yes 112062448
chr19 2394921 2394932 HOXA10 JASPAR yes 70783121
chr19 2394921 2394932 HOXC11 JASPAR yes 70783122
chr19 2394921 2394932 HOXC12 JASPAR yes 70783123
chr19 2394921 2394932 HOXD12 JASPAR yes 70783124
chr19 2394921 2394932 HOXA10 JASPAR yes 112062449
chr19 2394921 2394932 HOXC11 JASPAR yes 112062450
chr19 2394921 2394932 HOXC12 JASPAR yes 112062451
chr19 2394921 2394932 HOXD12 JASPAR yes 112062452
chr19 2394922 2394931 CDX1 JASPAR yes 70783125
chr19 2394922 2394931 CDX1 JASPAR yes 112062453
chr19 2394922 2394933 CDX2 JASPAR yes 70783126
chr19 2394922 2394933 CDX2 JASPAR yes 112062454
chr19 2394934 2394938 YY1 TRANSFAC yes 70783127
chr19 2394934 2394938 YY1 TRANSFAC yes 112062455
chr19 2394942 2394957 HNF4A JASPAR yes 70783128
chr19 2394942 2394957 HNF4A JASPAR yes 112062456
chr19 2394943 2394958 HNF4G JASPAR yes 70783129
chr19 2394943 2394958 HNF4G JASPAR yes 112062457
chr19 2394947 2394953 LEF1 TRANSFAC yes 70783130
chr19 2394947 2394953 SOX10 JASPAR yes 70783131
chr19 2394947 2394953 LEF1 TRANSFAC yes 112062458
chr19 2394947 2394953 SOX10 JASPAR yes 112062459
chr19 2394949 2394964 HNF4A JASPAR yes 70783132
chr19 2394949 2394964 HNF4A JASPAR yes 112062460
chr19 2394950 2394965 HNF4G JASPAR yes 70783133
chr19 2394950 2394965 HNF4G JASPAR yes 112062461
SNP sites on vista28218[chr19:2394788-2394991]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 2394853 rs75280324 G A
RREB1 RUNX2 RUNX3
5383980
Genes possibly regulated by vista28218[chr19:2394788-2394991]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 2289774 2308156 - LINGO3 ENSG00000220008.2 2308156 0.97 1.0 16780 13368
chr19 2321516 2328619 - LSM7 ENSG00000130332.10 2328619 0.75 1.0 16781 33831
chr19 2389769 2426237 + TMPRSS9 ENSG00000178297.8 2389769 0.87 1.0 16782 94981
chr19 2425622 2427892 - TIMM13 ENSG00000099800.3 2427892 0.71 1.0 16783 67099
chr19 2427636 2456994 - LMNB2 ENSG00000176619.6 2456994 0.77 1.0 16784 37997
chr19 2476120 2478257 + GADD45B ENSG00000099860.4 2476120 0.77 1.0 16785 18871
Expression level of Genes
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miRNAs possibly regulated by vista28218[chr19:2394788-2394991]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results