EnhancerDB
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  3. vista28219[chr19:2452794-2453150]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28219[chr19:2452794-2453150]
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Tissue distribution of vista28219
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Transcription factor that possibly regulate vista28219[chr19:2452794-2453150]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 2452857 2452871 EBF1 JASPAR yes 70783134
chr19 2452857 2452871 EBF1 JASPAR yes 112063596
chr19 2452858 2452869 EBF1 JASPAR yes 70783135
chr19 2452858 2452869 EBF1 JASPAR yes 112063597
chr19 2452859 2452870 EBF1 JASPAR yes 70783136
chr19 2452859 2452870 EBF1 JASPAR yes 112063598
chr19 2452863 2452883 PPARG JASPAR yes 70783137
chr19 2452863 2452883 PPARG JASPAR yes 112063599
chr19 2452866 2452871 SP1 TRANSFAC yes 70783138
chr19 2452866 2452871 SP1 TRANSFAC yes 112063600
chr19 2452876 2452886 GCM2 JASPAR yes 70783139
chr19 2452876 2452886 GCM2 JASPAR yes 112063601
chr19 2452886 2452900 XBP1 JASPAR yes 70783140
chr19 2452886 2452900 XBP1 JASPAR yes 112063602
chr19 2452888 2452899 NFE2L2 JASPAR yes 70783141
chr19 2452888 2452899 NFE2L2 JASPAR yes 112063603
chr19 2452891 2452897 ATF1 TRANSFAC yes 70783142
chr19 2452891 2452897 ATF1 TRANSFAC yes 112063604
chr19 2452891 2452898 XBP1 TRANSFAC yes 70783143
chr19 2452891 2452898 XBP1 TRANSFAC yes 112063605
chr19 2452891 2452903 CREB1 JASPAR yes 70783144
chr19 2452891 2452903 CREB1 JASPAR yes 112063606
chr19 2452899 2452913 GLIS2 JASPAR yes 70783145
chr19 2452899 2452913 GLIS3 JASPAR yes 70783146
chr19 2452899 2452913 GLIS2 JASPAR yes 112063607
chr19 2452899 2452913 GLIS3 JASPAR yes 112063608
chr19 2452905 2452915 SP1 JASPAR yes 70783147
chr19 2452905 2452915 SP1 JASPAR yes 112063609
chr19 2452908 2452919 FOSL2 JASPAR yes 70783148
chr19 2452908 2452919 FOSL2 JASPAR yes 112063610
chr19 2452909 2452920 NFE2 JASPAR yes 70783149
chr19 2452909 2452920 NFE2 JASPAR yes 112063611
chr19 2452911 2452917 ESR1 TRANSFAC yes 70783150
chr19 2452911 2452917 ESR1 TRANSFAC yes 112063612
chr19 2452913 2452917 ESR1 TRANSFAC yes 70783151
chr19 2452913 2452917 ESR1 TRANSFAC yes 112063613
chr19 2452918 2452929 EBF1 JASPAR yes 70783152
chr19 2452918 2452929 EBF1 JASPAR yes 112063614
chr19 2452919 2452933 GLIS3 JASPAR yes 70783153
chr19 2452919 2452933 GLIS3 JASPAR yes 112063615
chr19 2452928 2452939 NFE2L2 JASPAR yes 70783154
chr19 2452928 2452939 NFE2L2 JASPAR yes 112063616
chr19 2452931 2452937 ATF1 TRANSFAC yes 70783155
chr19 2452931 2452937 ATF1 TRANSFAC yes 112063617
chr19 2452931 2452938 XBP1 TRANSFAC yes 70783156
chr19 2452931 2452938 XBP1 TRANSFAC yes 112063618
chr19 2452931 2452943 CREB1 JASPAR yes 70783157
chr19 2452931 2452943 CREB1 JASPAR yes 112063619
chr19 2452938 2452949 EBF1 JASPAR yes 70783158
chr19 2452938 2452949 EBF1 JASPAR yes 112063620
chr19 2452939 2452953 GLIS3 JASPAR yes 70783159
chr19 2452939 2452953 GLIS3 JASPAR yes 112063621
chr19 2452945 2452955 SP1 JASPAR yes 70783160
chr19 2452945 2452955 SP1 JASPAR yes 112063622
chr19 2452946 2452956 SP1 JASPAR yes 70783161
chr19 2452946 2452956 SP1 JASPAR yes 112063623
chr19 2452948 2452959 NFE2L2 JASPAR yes 70783162
chr19 2452948 2452959 NFE2L2 JASPAR yes 112063624
chr19 2452951 2452957 ESR1 TRANSFAC yes 70783163
chr19 2452951 2452957 ESR1 TRANSFAC yes 112063625
chr19 2452953 2452957 ESR1 TRANSFAC yes 70783164
chr19 2452953 2452957 ESR1 TRANSFAC yes 112063626
chr19 2452961 2452972 YY2 JASPAR yes 70783165
chr19 2452961 2452972 YY2 JASPAR yes 112063627
chr19 2452965 2452975 SP1 JASPAR yes 70783166
chr19 2452965 2452975 SP1 JASPAR yes 112063628
chr19 2452968 2452979 FOSL2 JASPAR yes 70783167
chr19 2452968 2452979 FOSL2 JASPAR yes 112063629
chr19 2452969 2452980 NFE2 JASPAR yes 70783168
chr19 2452969 2452980 NFE2 JASPAR yes 112063630
chr19 2452971 2452977 ESR1 TRANSFAC yes 70783169
chr19 2452971 2452977 ESR1 TRANSFAC yes 112063631
chr19 2452973 2452977 ESR1 TRANSFAC yes 70783170
chr19 2452973 2452977 ESR1 TRANSFAC yes 112063632
chr19 2452981 2452992 YY2 JASPAR yes 70783171
chr19 2452981 2452992 YY2 JASPAR yes 112063633
chr19 2452985 2452995 SP1 JASPAR yes 70783172
chr19 2452985 2452995 SP1 JASPAR yes 112063634
chr19 2452986 2452996 SP1 JASPAR yes 70783173
chr19 2452986 2452996 SP1 JASPAR yes 112063635
chr19 2452988 2452999 NFE2L2 JASPAR yes 70783174
chr19 2452988 2452999 NFE2L2 JASPAR yes 112063636
chr19 2452991 2452997 ESR1 TRANSFAC yes 70783175
chr19 2452991 2452997 ESR1 TRANSFAC yes 112063637
chr19 2452993 2452997 ESR1 TRANSFAC yes 70783176
chr19 2452993 2452997 ESR1 TRANSFAC yes 112063638
chr19 2453001 2453012 YY2 JASPAR yes 70783177
chr19 2453001 2453012 YY2 JASPAR yes 112063639
chr19 2453005 2453015 SP1 JASPAR yes 70783178
chr19 2453005 2453015 SP1 JASPAR yes 112063640
chr19 2453006 2453016 SP1 JASPAR yes 70783179
chr19 2453006 2453016 SP1 JASPAR yes 112063641
chr19 2453008 2453019 NFE2L2 JASPAR yes 70783180
chr19 2453008 2453019 NFE2L2 JASPAR yes 112063642
chr19 2453011 2453017 ESR1 TRANSFAC yes 70783181
chr19 2453011 2453017 ESR1 TRANSFAC yes 112063643
chr19 2453013 2453017 ESR1 TRANSFAC yes 70783182
chr19 2453013 2453017 ESR1 TRANSFAC yes 112063644
chr19 2453019 2453033 GLIS2 JASPAR yes 70783183
chr19 2453019 2453033 GLIS3 JASPAR yes 70783184
chr19 2453019 2453033 GLIS2 JASPAR yes 112063645
chr19 2453019 2453033 GLIS3 JASPAR yes 112063646
chr19 2453025 2453035 SP1 JASPAR yes 70783185
chr19 2453025 2453035 SP1 JASPAR yes 112063647
chr19 2453026 2453036 SP1 JASPAR yes 70783186
chr19 2453026 2453036 SP1 JASPAR yes 112063648
chr19 2453028 2453039 NFE2L2 JASPAR yes 70783187
chr19 2453028 2453039 NFE2L2 JASPAR yes 112063649
chr19 2453031 2453037 ESR1 TRANSFAC yes 70783188
chr19 2453031 2453037 ESR1 TRANSFAC yes 112063650
chr19 2453033 2453037 ESR1 TRANSFAC yes 70783189
chr19 2453033 2453037 ESR1 TRANSFAC yes 112063651
chr19 2453039 2453053 GLIS2 JASPAR yes 70783190
chr19 2453039 2453053 GLIS3 JASPAR yes 70783191
chr19 2453039 2453053 GLIS2 JASPAR yes 112063652
chr19 2453039 2453053 GLIS3 JASPAR yes 112063653
chr19 2453045 2453055 SP1 JASPAR yes 70783192
chr19 2453045 2453055 SP1 JASPAR yes 112063654
chr19 2453046 2453056 SP1 JASPAR yes 70783193
chr19 2453046 2453056 SP1 JASPAR yes 112063655
chr19 2453048 2453059 NFE2L2 JASPAR yes 70783194
chr19 2453048 2453059 NFE2L2 JASPAR yes 112063656
chr19 2453051 2453057 ESR1 TRANSFAC yes 70783195
chr19 2453051 2453057 ESR1 TRANSFAC yes 112063657
chr19 2453053 2453057 ESR1 TRANSFAC yes 70783196
chr19 2453053 2453057 ESR1 TRANSFAC yes 112063658
chr19 2453057 2453071 EBF1 JASPAR yes 70783197
chr19 2453057 2453071 EBF1 JASPAR yes 112063659
chr19 2453058 2453069 EBF1 JASPAR yes 70783198
chr19 2453058 2453069 EBF1 JASPAR yes 112063660
chr19 2453065 2453075 SP1 JASPAR yes 70783199
chr19 2453065 2453075 SP1 JASPAR yes 112063661
chr19 2453067 2453078 NFE2L2 JASPAR yes 70783200
chr19 2453067 2453078 NFE2L2 JASPAR yes 112063662
chr19 2453070 2453076 ESR1 TRANSFAC yes 70783201
chr19 2453070 2453076 ESR1 TRANSFAC yes 112063663
chr19 2453072 2453076 ESR1 TRANSFAC yes 70783202
chr19 2453072 2453076 ESR1 TRANSFAC yes 112063664
chr19 2453077 2453092 ZBTB33 JASPAR yes 70783203
chr19 2453077 2453092 ZBTB33 JASPAR yes 112063665
chr19 2453085 2453099 XBP1 JASPAR yes 70783204
chr19 2453085 2453099 XBP1 JASPAR yes 112063666
chr19 2453087 2453098 NFE2L2 JASPAR yes 70783205
chr19 2453087 2453098 NFE2L2 JASPAR yes 112063667
chr19 2453090 2453096 ATF1 TRANSFAC yes 70783206
chr19 2453090 2453096 ATF1 TRANSFAC yes 112063668
chr19 2453090 2453097 XBP1 TRANSFAC yes 70783207
chr19 2453090 2453097 XBP1 TRANSFAC yes 112063669
chr19 2453090 2453102 CREB1 JASPAR yes 70783208
chr19 2453090 2453102 CREB1 JASPAR yes 112063670
chr19 2453098 2453112 GLIS3 JASPAR yes 70783209
chr19 2453098 2453112 GLIS3 JASPAR yes 112063671
chr19 2453105 2453110 SP1 TRANSFAC yes 70783210
chr19 2453105 2453110 SP1 TRANSFAC yes 112063672
chr19 2453108 2453119 USF1 JASPAR yes 70783211
chr19 2453108 2453119 USF2 JASPAR yes 70783212
chr19 2453108 2453119 USF1 JASPAR yes 112063673
chr19 2453108 2453119 USF2 JASPAR yes 112063674
chr19 2453142 2453152 SP1 JASPAR yes 70783213
chr19 2453142 2453152 SP1 JASPAR yes 112063675
chr19 2453143 2453153 SP1 JASPAR yes 70783214
chr19 2453143 2453153 SP1 JASPAR yes 112063676
SNP sites on vista28219[chr19:2452794-2453150]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 2452840 rs1981637 A T no 5384239
chr19 2452848 rs79122943 C T no 5384240
chr19 2452870 rs115980376 G A
EBF1 PPARG SP1
5384241
chr19 2452904 rs564605278 G A
GLIS2 GLIS3
5384242
chr19 2452911 rs12972186 A C
ESR1 FOSL2 GLIS2 GLIS3 NFE2 SP1
5384243
chr19 2452914 rs12984562 G C
ESR1 FOSL2 NFE2 SP1
5384244
chr19 2452931 rs568231112 C T
ATF1 CREB1 GLIS3 NFE2L2 XBP1
5384245
chr19 2452944 rs140846407 A G
EBF1 GLIS3
5384246
chr19 2453003 rs547750125 A C
YY2
5384247
chr19 2453004 rs565828895 A G
YY2
5384248
chr19 2453023 rs78403784 C A
GLIS2 GLIS3
5384249
chr19 2453024 rs78986272 G A
GLIS2 GLIS3
5384250
chr19 2453054 rs536715018 G C
ESR1 NFE2L2 SP1
5384251
chr19 2453083 rs74541493 G A
ZBTB33
5384252
chr19 2453086 rs115470424 A G
XBP1 ZBTB33
5384253
Genes possibly regulated by vista28219[chr19:2452794-2453150]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 2389769 2426237 + TMPRSS9 ENSG00000178297.8 2389769 0.87 1.0 16782 36975
chr19 2425622 2427892 - TIMM13 ENSG00000099800.3 2427892 0.71 1.0 16783 75098
chr19 2427636 2456994 - LMNB2 ENSG00000176619.6 2456994 0.77 1.0 16784 96156
chr19 2476120 2478257 + GADD45B ENSG00000099860.4 2476120 0.77 1.0 16785 77030
Expression level of Genes
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miRNAs possibly regulated by vista28219[chr19:2452794-2453150]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr19 2434912 2434931 - hsa-miR-7108-3p MIMAT0028114 2456956 0.00125344697919278 0.0 0.0 801
Expression level of miRNAs
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