EnhancerDB
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  3. vista28224[chr19:2503555-2504136]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28224[chr19:2503555-2504136]
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Tissue distribution of vista28224
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Transcription factor that possibly regulate vista28224[chr19:2503555-2504136]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 2503550 2503562 ZBTB7B JASPAR yes 70783414
chr19 2503550 2503562 ZBTB7C JASPAR yes 70783415
chr19 2503550 2503562 ZBTB7B JASPAR yes 112067522
chr19 2503550 2503562 ZBTB7C JASPAR yes 112067523
chr19 2503553 2503558 SP1 TRANSFAC yes 70783416
chr19 2503553 2503558 SP1 TRANSFAC yes 112067524
chr19 2503591 2503605 JUN JASPAR yes 70783417
chr19 2503591 2503605 JUN JASPAR yes 112067525
chr19 2503594 2503605 FOSL2 JASPAR yes 70783418
chr19 2503594 2503605 JUNB JASPAR yes 70783419
chr19 2503594 2503605 FOSL2 JASPAR yes 112067526
chr19 2503594 2503605 JUNB JASPAR yes 112067527
chr19 2503595 2503606 FOS JASPAR yes 70783420
chr19 2503595 2503606 FOSL1 JASPAR yes 70783421
chr19 2503595 2503606 JUND JASPAR yes 70783422
chr19 2503595 2503606 NFE2 JASPAR yes 70783423
chr19 2503595 2503606 FOS JASPAR yes 112067528
chr19 2503595 2503606 FOSL1 JASPAR yes 112067529
chr19 2503595 2503606 JUND JASPAR yes 112067530
chr19 2503595 2503606 NFE2 JASPAR yes 112067531
chr19 2503596 2503605 JDP2 JASPAR yes 70783424
chr19 2503596 2503605 JDP2 JASPAR yes 112067532
chr19 2503596 2503607 FOSL2 JASPAR yes 70783425
chr19 2503596 2503607 JUNB JASPAR yes 70783426
chr19 2503596 2503607 FOSL2 JASPAR yes 112067533
chr19 2503596 2503607 JUNB JASPAR yes 112067534
chr19 2503596 2503610 JUN JASPAR yes 70783427
chr19 2503596 2503610 JUN JASPAR yes 112067535
chr19 2503601 2503615 PLAG1 JASPAR yes 70783428
chr19 2503601 2503615 PLAG1 JASPAR yes 112067536
chr19 2503625 2503640 RUNX2 JASPAR yes 70783429
chr19 2503625 2503640 RUNX2 JASPAR yes 112067537
chr19 2503628 2503640 GLI2 JASPAR yes 70783430
chr19 2503628 2503640 GLI2 JASPAR yes 112067538
chr19 2503629 2503641 ZBTB7A JASPAR yes 70783431
chr19 2503629 2503641 ZBTB7A JASPAR yes 112067539
chr19 2503637 2503643 ETS1 JASPAR yes 70783432
chr19 2503637 2503643 SPI1 JASPAR yes 70783433
chr19 2503637 2503643 ETS1 JASPAR yes 112067540
chr19 2503637 2503643 SPI1 JASPAR yes 112067541
chr19 2503662 2503676 BATF3 JASPAR yes 70783434
chr19 2503662 2503676 BATF3 JASPAR yes 112067542
chr19 2503666 2503674 MEIS2 JASPAR yes 70783435
chr19 2503666 2503674 MEIS3 JASPAR yes 70783436
chr19 2503666 2503674 MEIS2 JASPAR yes 112067543
chr19 2503666 2503674 MEIS3 JASPAR yes 112067544
chr19 2503667 2503671 NFE TRANSFAC yes 70783437
chr19 2503667 2503671 NFE TRANSFAC yes 112067545
chr19 2503692 2503696 YY1 TRANSFAC yes 70783438
chr19 2503692 2503696 YY1 TRANSFAC yes 112067546
chr19 2503710 2503725 FOXP1 JASPAR yes 70783439
chr19 2503710 2503725 FOXP1 JASPAR yes 112067547
chr19 2503710 2503731 IRF1 JASPAR yes 70783440
chr19 2503710 2503731 IRF1 JASPAR yes 112067548
chr19 2503711 2503722 FOXP2 JASPAR yes 70783441
chr19 2503711 2503722 FOXP2 JASPAR yes 112067549
chr19 2503713 2503721 FOXO3 JASPAR yes 70783442
chr19 2503713 2503721 FOXO3 JASPAR yes 112067550
chr19 2503713 2503724 FOXA1 JASPAR yes 70783443
chr19 2503713 2503724 FOXA1 JASPAR yes 112067551
chr19 2503713 2503727 STAT1 JASPAR yes 70783444
chr19 2503713 2503727 STAT1 JASPAR yes 112067552
chr19 2503714 2503726 IRF1 JASPAR yes 70783445
chr19 2503714 2503726 IRF1 JASPAR yes 112067553
chr19 2503714 2503728 IRF7 JASPAR yes 70783446
chr19 2503714 2503728 IRF7 JASPAR yes 112067554
chr19 2503719 2503723 YY1 TRANSFAC yes 70783447
chr19 2503719 2503723 YY1 TRANSFAC yes 112067555
chr19 2503752 2503756 H4TF2 TRANSFAC yes 70783448
chr19 2503752 2503756 H4TF2 TRANSFAC yes 112067556
chr19 2503776 2503791 ZIC3 JASPAR yes 70783449
chr19 2503776 2503791 ZIC4 JASPAR yes 70783450
chr19 2503776 2503791 ZIC3 JASPAR yes 112067557
chr19 2503776 2503791 ZIC4 JASPAR yes 112067558
chr19 2503788 2503803 NR2C2 JASPAR yes 70783451
chr19 2503788 2503803 NR2C2 JASPAR yes 112067559
chr19 2503792 2503810 RARA JASPAR yes 70783452
chr19 2503792 2503810 RARA JASPAR yes 112067560
chr19 2503823 2503832 SNAI2 JASPAR yes 70783453
chr19 2503823 2503832 SNAI2 JASPAR yes 112067561
chr19 2503823 2503833 SREBF2 JASPAR yes 70783454
chr19 2503823 2503833 SREBF2 JASPAR yes 112067562
chr19 2503832 2503844 PKNOX1 JASPAR yes 70783455
chr19 2503832 2503844 PKNOX2 JASPAR yes 70783456
chr19 2503832 2503844 TGIF1 JASPAR yes 70783457
chr19 2503832 2503844 TGIF2 JASPAR yes 70783458
chr19 2503832 2503844 PKNOX1 JASPAR yes 112067563
chr19 2503832 2503844 PKNOX2 JASPAR yes 112067564
chr19 2503832 2503844 TGIF1 JASPAR yes 112067565
chr19 2503832 2503844 TGIF2 JASPAR yes 112067566
chr19 2503837 2503857 TBX19 JASPAR yes 70783459
chr19 2503837 2503857 TBX19 JASPAR yes 112067567
chr19 2503839 2503855 T JASPAR yes 70783460
chr19 2503839 2503855 T JASPAR yes 112067568
chr19 2503846 2503855 ZEB1 JASPAR yes 70783461
chr19 2503846 2503855 ZEB1 JASPAR yes 112067569
chr19 2503846 2503856 TBX21 JASPAR yes 70783462
chr19 2503846 2503856 TBX21 JASPAR yes 112067570
chr19 2503846 2503859 EOMES JASPAR yes 70783463
chr19 2503846 2503859 EOMES JASPAR yes 112067571
chr19 2503847 2503855 MGA JASPAR yes 70783464
chr19 2503847 2503855 TBX15 JASPAR yes 70783465
chr19 2503847 2503855 TBX1 JASPAR yes 70783466
chr19 2503847 2503855 TBX4 JASPAR yes 70783467
chr19 2503847 2503855 TBX5 JASPAR yes 70783468
chr19 2503847 2503855 MGA JASPAR yes 112067572
chr19 2503847 2503855 TBX15 JASPAR yes 112067573
chr19 2503847 2503855 TBX1 JASPAR yes 112067574
chr19 2503847 2503855 TBX4 JASPAR yes 112067575
chr19 2503847 2503855 TBX5 JASPAR yes 112067576
chr19 2503847 2503857 TBR1 JASPAR yes 70783469
chr19 2503847 2503857 TBR1 JASPAR yes 112067577
chr19 2503851 2503866 HNF4A JASPAR yes 70783470
chr19 2503851 2503866 HNF4A JASPAR yes 112067578
chr19 2503861 2503866 USF2 TRANSFAC yes 70783471
chr19 2503861 2503866 USF2 TRANSFAC yes 112067579
chr19 2503900 2503915 NR2C2 JASPAR yes 70783472
chr19 2503900 2503915 NR2C2 JASPAR yes 112067580
chr19 2503901 2503915 RXRG JASPAR yes 70783473
chr19 2503901 2503915 RXRG JASPAR yes 112067581
chr19 2503916 2503931 RFX5 JASPAR yes 70783474
chr19 2503916 2503931 RFX5 JASPAR yes 112067582
chr19 2503935 2503946 JUNB JASPAR yes 70783475
chr19 2503935 2503946 JUNB JASPAR yes 112067583
chr19 2503936 2503947 FOSL1 JASPAR yes 70783476
chr19 2503936 2503947 FOSL1 JASPAR yes 112067584
chr19 2503937 2503948 FOSL2 JASPAR yes 70783477
chr19 2503937 2503948 FOSL2 JASPAR yes 112067585
chr19 2503938 2503949 BATF JASPAR yes 70783478
chr19 2503938 2503949 BATF JASPAR yes 112067586
chr19 2503948 2503959 E2F4 JASPAR yes 70783479
chr19 2503948 2503959 E2F6 JASPAR yes 70783480
chr19 2503948 2503959 E2F4 JASPAR yes 112067587
chr19 2503948 2503959 E2F6 JASPAR yes 112067588
chr19 2503949 2503960 E2F1 JASPAR yes 70783481
chr19 2503949 2503960 E2F1 JASPAR yes 112067589
chr19 2504006 2504016 MEF2A JASPAR yes 70783482
chr19 2504006 2504016 MEF2A JASPAR yes 112067590
chr19 2504082 2504093 E2F6 JASPAR yes 70783483
chr19 2504082 2504093 E2F6 JASPAR yes 112067591
chr19 2504109 2504120 NFKB1 JASPAR yes 70783484
chr19 2504109 2504120 NFKB1 JASPAR yes 112067592
chr19 2504113 2504125 INSM1 JASPAR yes 70783485
chr19 2504113 2504125 INSM1 JASPAR yes 112067593
chr19 2504116 2504131 FOXP1 JASPAR yes 70783486
chr19 2504116 2504131 FOXP1 JASPAR yes 112067594
chr19 2504119 2504130 FOXP2 JASPAR yes 70783487
chr19 2504119 2504130 FOXP2 JASPAR yes 112067595
SNP sites on vista28224[chr19:2503555-2504136]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 2503628 rs11084943 G A
GLI2 RUNX2
5384983
chr19 2503836 rs373925993 C T
PKNOX1 PKNOX2 TGIF1 TGIF2
5384984
chr19 2503955 rs74474692 C T
E2F1 E2F4 E2F6
5384985
chr19 2503974 rs574918368 G GCCGGCT no 5384986
Genes possibly regulated by vista28224[chr19:2503555-2504136]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 2425622 2427892 - TIMM13 ENSG00000099800.3 2427892 0.71 1.0 16783 24337
chr19 2427636 2456994 - LMNB2 ENSG00000176619.6 2456994 0.77 1.0 16784 53439
chr19 2476120 2478257 + GADD45B ENSG00000099860.4 2476120 0.77 1.0 16785 72565
Expression level of Genes
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miRNAs possibly regulated by vista28224[chr19:2503555-2504136]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results