EnhancerDB
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  3. vista28225[chr19:2507206-2507458]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28225[chr19:2507206-2507458]
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Tissue distribution of vista28225
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Transcription factor that possibly regulate vista28225[chr19:2507206-2507458]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 2506887 2507522 POLR2A UCSC Txn Factor no Conserved 108360784
chr19 2507135 2507411 FOXA1 UCSC Txn Factor no Conserved 108360905
chr19 2507156 2507397 FOXA2 UCSC Txn Factor no Conserved 108360912
chr19 2507168 2507492 CEBPB UCSC Txn Factor no Conserved 108360921
chr19 2507181 2507525 STAT3 UCSC Txn Factor no Conserved 108360926
chr19 2507240 2507251 FOXH1 JASPAR yes 70783488
chr19 2507240 2507251 FOXH1 JASPAR yes 112068042
chr19 2507253 2507268 FOXA1 JASPAR yes 70783489
chr19 2507253 2507268 FOXA1 JASPAR yes 112068043
chr19 2507254 2507269 FOXP1 JASPAR yes 70783490
chr19 2507254 2507269 FOXP1 JASPAR yes 112068044
chr19 2507255 2507266 FOXP2 JASPAR yes 70783491
chr19 2507255 2507266 FOXP2 JASPAR yes 112068045
chr19 2507255 2507267 FOXC2 JASPAR yes 70783492
chr19 2507255 2507267 FOXC2 JASPAR yes 112068046
chr19 2507255 2507269 FOXF2 JASPAR yes 70783493
chr19 2507255 2507269 FOXF2 JASPAR yes 112068047
chr19 2507256 2507264 FOXD1 JASPAR yes 70783494
chr19 2507256 2507264 FOXG1 JASPAR yes 70783495
chr19 2507256 2507264 FOXO3 JASPAR yes 70783496
chr19 2507256 2507264 FOXD1 JASPAR yes 112068048
chr19 2507256 2507264 FOXG1 JASPAR yes 112068049
chr19 2507256 2507264 FOXO3 JASPAR yes 112068050
chr19 2507256 2507267 FOXB1 JASPAR yes 70783497
chr19 2507256 2507267 FOXC1 JASPAR yes 70783498
chr19 2507256 2507267 FOXB1 JASPAR yes 112068051
chr19 2507256 2507267 FOXC1 JASPAR yes 112068052
chr19 2507257 2507264 FOXD2 JASPAR yes 70783499
chr19 2507257 2507264 FOXI1 JASPAR yes 70783500
chr19 2507257 2507264 FOXL1 JASPAR yes 70783501
chr19 2507257 2507264 FOXO4 JASPAR yes 70783502
chr19 2507257 2507264 FOXO6 JASPAR yes 70783503
chr19 2507257 2507264 FOXP3 JASPAR yes 70783504
chr19 2507257 2507264 FOXD2 JASPAR yes 112068053
chr19 2507257 2507264 FOXI1 JASPAR yes 112068054
chr19 2507257 2507264 FOXL1 JASPAR yes 112068055
chr19 2507257 2507264 FOXO4 JASPAR yes 112068056
chr19 2507257 2507264 FOXO6 JASPAR yes 112068057
chr19 2507257 2507264 FOXP3 JASPAR yes 112068058
chr19 2507257 2507265 FOXO3 JASPAR yes 70783505
chr19 2507257 2507265 FOXO3 JASPAR yes 112068059
chr19 2507257 2507268 FOXA1 JASPAR yes 70783506
chr19 2507257 2507268 FOXA1 JASPAR yes 112068060
chr19 2507267 2507271 NFE TRANSFAC yes 70783507
chr19 2507267 2507271 NFE TRANSFAC yes 112068061
chr19 2507274 2507289 FOXA1 JASPAR yes 70783508
chr19 2507274 2507289 FOXA1 JASPAR yes 112068062
chr19 2507276 2507288 FOXC2 JASPAR yes 70783509
chr19 2507276 2507288 FOXC2 JASPAR yes 112068063
chr19 2507276 2507290 FOXF2 JASPAR yes 70783510
chr19 2507276 2507290 FOXF2 JASPAR yes 112068064
chr19 2507277 2507285 FOXG1 JASPAR yes 70783511
chr19 2507277 2507285 FOXG1 JASPAR yes 112068065
chr19 2507277 2507288 FOXB1 JASPAR yes 70783512
chr19 2507277 2507288 FOXC1 JASPAR yes 70783513
chr19 2507277 2507288 FOXB1 JASPAR yes 112068066
chr19 2507277 2507288 FOXC1 JASPAR yes 112068067
chr19 2507278 2507289 FOXA1 JASPAR yes 70783514
chr19 2507278 2507289 FOXH1 JASPAR yes 70783515
chr19 2507278 2507289 FOXA1 JASPAR yes 112068068
chr19 2507278 2507289 FOXH1 JASPAR yes 112068069
chr19 2507319 2507326 JUN TRANSFAC yes 70783516
chr19 2507319 2507326 JUN TRANSFAC yes 112068070
chr19 2507329 2507340 ELK4 JASPAR yes 70783517
chr19 2507329 2507340 ELK4 JASPAR yes 112068071
chr19 2507330 2507342 ELF1 JASPAR yes 70783518
chr19 2507330 2507342 ELF1 JASPAR yes 112068072
chr19 2507332 2507338 ETS1 JASPAR yes 70783519
chr19 2507332 2507338 ETS1 JASPAR yes 112068073
chr19 2507344 2507359 JUND JASPAR yes 70783520
chr19 2507344 2507359 JUND JASPAR yes 112068074
chr19 2507347 2507359 HLF JASPAR yes 70783521
chr19 2507347 2507359 HLF JASPAR yes 112068075
chr19 2507360 2507368 FEV JASPAR yes 70783522
chr19 2507360 2507368 FEV JASPAR yes 112068076
chr19 2507372 2507376 YY1 TRANSFAC yes 70783523
chr19 2507372 2507376 YY1 TRANSFAC yes 112068077
chr19 2507387 2507391 NFE TRANSFAC yes 70783524
chr19 2507387 2507391 NFE TRANSFAC yes 112068078
chr19 2507418 2507422 LFA1 TRANSFAC yes 70783525
chr19 2507418 2507422 LFA1 TRANSFAC yes 112068079
chr19 2507446 2507458 NHLH1 JASPAR yes 70783526
chr19 2507446 2507458 NHLH1 JASPAR yes 112068080
chr19 2507447 2507457 NHLH1 JASPAR yes 70783527
chr19 2507447 2507457 TFAP4 JASPAR yes 70783528
chr19 2507447 2507457 NHLH1 JASPAR yes 112068081
chr19 2507447 2507457 TFAP4 JASPAR yes 112068082
SNP sites on vista28225[chr19:2507206-2507458]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 2507296 rs76307882 A G
CEBPB FOXA1 FOXA2 POLR2A STAT3
5385024
Genes possibly regulated by vista28225[chr19:2507206-2507458]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 2425622 2427892 - TIMM13 ENSG00000099800.3 2427892 0.71 1.0 16783 20686
chr19 2427636 2456994 - LMNB2 ENSG00000176619.6 2456994 0.77 1.0 16784 49788
chr19 2476120 2478257 + GADD45B ENSG00000099860.4 2476120 0.77 1.0 16785 68914
Expression level of Genes
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miRNAs possibly regulated by vista28225[chr19:2507206-2507458]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results