EnhancerDB
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  3. vista28226[chr19:2524971-2525260]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28226[chr19:2524971-2525260]
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Tissue distribution of vista28226
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Transcription factor that possibly regulate vista28226[chr19:2524971-2525260]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 2524598 2525776 POLR2A UCSC Txn Factor no Conserved 108361052
chr19 2524799 2525126 CEBPB UCSC Txn Factor no Conserved 108361117
chr19 2525017 2525293 ESR1 UCSC Txn Factor no Conserved 108361187
chr19 2525024 2525619 TFAP2C UCSC Txn Factor no Conserved 108361189
chr19 2524968 2524979 CEBPB JASPAR yes 70783529
chr19 2524968 2524979 CEBPB JASPAR yes 112069003
chr19 2524968 2524980 HLF JASPAR yes 70783530
chr19 2524968 2524980 HLF JASPAR yes 112069004
chr19 2524968 2524981 ATF4 JASPAR yes 70783531
chr19 2524968 2524981 ATF4 JASPAR yes 112069005
chr19 2524968 2524983 JUND JASPAR yes 70783532
chr19 2524968 2524983 JUND JASPAR yes 112069006
chr19 2524969 2524980 CEBPA JASPAR yes 70783533
chr19 2524969 2524980 CEBPA JASPAR yes 112069007
chr19 2524969 2524982 JUN JASPAR yes 70783534
chr19 2524969 2524982 JUN JASPAR yes 112069008
chr19 2525025 2525039 JUN JASPAR yes 70783535
chr19 2525025 2525039 JUN JASPAR yes 112069009
chr19 2525027 2525038 BATF JASPAR yes 70783536
chr19 2525027 2525038 BATF JASPAR yes 112069010
chr19 2525028 2525039 JUNB JASPAR yes 70783537
chr19 2525028 2525039 JUNB JASPAR yes 112069011
chr19 2525029 2525040 FOS JASPAR yes 70783538
chr19 2525029 2525040 FOSL1 JASPAR yes 70783539
chr19 2525029 2525040 JUND JASPAR yes 70783540
chr19 2525029 2525040 FOS JASPAR yes 112069012
chr19 2525029 2525040 FOSL1 JASPAR yes 112069013
chr19 2525029 2525040 JUND JASPAR yes 112069014
chr19 2525048 2525062 GLIS2 JASPAR yes 70783541
chr19 2525048 2525062 GLIS2 JASPAR yes 112069015
chr19 2525064 2525075 FOXA1 JASPAR yes 70783542
chr19 2525064 2525075 FOXA1 JASPAR yes 112069016
chr19 2525064 2525079 FOXA1 JASPAR yes 70783543
chr19 2525064 2525079 FOXA1 JASPAR yes 112069017
chr19 2525090 2525104 JUN JASPAR yes 70783544
chr19 2525090 2525104 JUN JASPAR yes 112069018
chr19 2525092 2525103 BATF JASPAR yes 70783545
chr19 2525092 2525103 BATF JASPAR yes 112069019
chr19 2525094 2525105 FOS JASPAR yes 70783546
chr19 2525094 2525105 FOSL1 JASPAR yes 70783547
chr19 2525094 2525105 JUND JASPAR yes 70783548
chr19 2525094 2525105 FOS JASPAR yes 112069020
chr19 2525094 2525105 FOSL1 JASPAR yes 112069021
chr19 2525094 2525105 JUND JASPAR yes 112069022
chr19 2525095 2525106 FOSL2 JASPAR yes 70783549
chr19 2525095 2525106 JUNB JASPAR yes 70783550
chr19 2525095 2525106 FOSL2 JASPAR yes 112069023
chr19 2525095 2525106 JUNB JASPAR yes 112069024
chr19 2525096 2525103 JUN TRANSFAC yes 70783551
chr19 2525096 2525103 JUN TRANSFAC yes 112069025
chr19 2525096 2525107 BATF JASPAR yes 70783552
chr19 2525096 2525107 BATF JASPAR yes 112069026
chr19 2525107 2525117 NFKB1 JASPAR yes 70783553
chr19 2525107 2525117 REL JASPAR yes 70783554
chr19 2525107 2525117 NFKB1 JASPAR yes 112069027
chr19 2525107 2525117 REL JASPAR yes 112069028
chr19 2525110 2525115 SP1 TRANSFAC yes 70783555
chr19 2525110 2525115 SP1 TRANSFAC yes 112069029
chr19 2525113 2525119 SP1 TRANSFAC yes 70783556
chr19 2525113 2525119 SP1 TRANSFAC yes 112069030
chr19 2525113 2525123 SP1 JASPAR yes 70783557
chr19 2525113 2525123 SP1 JASPAR yes 112069031
chr19 2525125 2525139 ZIC1 JASPAR yes 70783558
chr19 2525125 2525139 ZIC1 JASPAR yes 112069032
chr19 2525136 2525150 PLAG1 JASPAR yes 70783559
chr19 2525136 2525150 PLAG1 JASPAR yes 112069033
chr19 2525146 2525166 ESR1 JASPAR yes 70783560
chr19 2525146 2525166 ESR1 JASPAR yes 112069034
chr19 2525150 2525167 ESR1 JASPAR yes 70783561
chr19 2525150 2525167 ESR1 JASPAR yes 112069035
chr19 2525152 2525156 LFA1 TRANSFAC yes 70783562
chr19 2525152 2525156 LFA1 TRANSFAC yes 112069036
chr19 2525160 2525180 TP63 JASPAR yes 70783563
chr19 2525160 2525180 TP63 JASPAR yes 112069037
chr19 2525172 2525187 TFAP2A JASPAR yes 70783564
chr19 2525172 2525187 TFAP2C JASPAR yes 70783565
chr19 2525172 2525187 TFAP2A JASPAR yes 112069038
chr19 2525172 2525187 TFAP2C JASPAR yes 112069039
chr19 2525174 2525189 TFAP2C JASPAR yes 70783566
chr19 2525174 2525189 TFAP2C JASPAR yes 112069040
chr19 2525175 2525187 TFAP2A JASPAR yes 70783567
chr19 2525175 2525187 TFAP2B JASPAR yes 70783568
chr19 2525175 2525187 TFAP2C JASPAR yes 70783569
chr19 2525175 2525187 TFAP2A JASPAR yes 112069041
chr19 2525175 2525187 TFAP2B JASPAR yes 112069042
chr19 2525175 2525187 TFAP2C JASPAR yes 112069043
chr19 2525176 2525185 TFAP2A JASPAR yes 70783570
chr19 2525176 2525185 TFAP2A JASPAR yes 112069044
chr19 2525181 2525186 SP1 TRANSFAC yes 70783571
chr19 2525181 2525186 SP1 TRANSFAC yes 112069045
chr19 2525196 2525201 ETS2 TRANSFAC yes 70783572
chr19 2525196 2525201 ETS2 TRANSFAC yes 112069046
chr19 2525204 2525214 SP1 JASPAR yes 70783573
chr19 2525204 2525214 ZNF740 JASPAR yes 70783574
chr19 2525204 2525214 SP1 JASPAR yes 112069047
chr19 2525204 2525214 ZNF740 JASPAR yes 112069048
chr19 2525206 2525212 MAZ TRANSFAC yes 70783575
chr19 2525206 2525212 MAZ TRANSFAC yes 112069049
chr19 2525210 2525221 E2F1 JASPAR yes 70783576
chr19 2525210 2525221 E2F1 JASPAR yes 112069050
chr19 2525211 2525216 SP1 TRANSFAC yes 70783577
chr19 2525211 2525216 SP1 TRANSFAC yes 112069051
chr19 2525211 2525222 E2F4 JASPAR yes 70783578
chr19 2525211 2525222 E2F6 JASPAR yes 70783579
chr19 2525211 2525222 E2F4 JASPAR yes 112069052
chr19 2525211 2525222 E2F6 JASPAR yes 112069053
chr19 2525212 2525217 SP1 TRANSFAC yes 70783580
chr19 2525212 2525217 SP1 TRANSFAC yes 112069054
chr19 2525222 2525243 REST JASPAR yes 70783581
chr19 2525222 2525243 REST JASPAR yes 112069055
chr19 2525223 2525242 REST JASPAR yes 70783582
chr19 2525223 2525242 REST JASPAR yes 112069056
chr19 2525231 2525241 SP1 JASPAR yes 70783583
chr19 2525231 2525241 SP1 JASPAR yes 112069057
chr19 2525233 2525237 LFA1 TRANSFAC yes 70783584
chr19 2525233 2525237 LFA1 TRANSFAC yes 112069058
chr19 2525240 2525250 FIGLA JASPAR yes 70783585
chr19 2525240 2525250 FIGLA JASPAR yes 112069059
chr19 2525245 2525259 RXRB JASPAR yes 70783586
chr19 2525245 2525259 RXRB JASPAR yes 112069060
chr19 2525247 2525251 ESR1 TRANSFAC yes 70783587
chr19 2525247 2525251 ESR1 TRANSFAC yes 112069061
chr19 2525254 2525268 MTF1 JASPAR yes 70783588
chr19 2525254 2525268 MTF1 JASPAR yes 112069062
SNP sites on vista28226[chr19:2524971-2525260]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 2524982 rs11299529 AT A
CEBPB JUN JUND POLR2A
5385128
chr19 2525050 rs55657148 G A
CEBPB ESR1 GLIS2 POLR2A TFAP2C
5385129
chr19 2525053 rs370273375 C G
CEBPB ESR1 GLIS2 POLR2A TFAP2C
5385130
chr19 2525181 rs56670381 CG C
ESR1 POLR2A SP1 TFAP2A TFAP2B TFAP2C
5385131
chr19 2525181 rs750657805 CG C
ESR1 POLR2A SP1 TFAP2A TFAP2B TFAP2C
5385132
chr19 2525188 rs183659762 C T
ESR1 POLR2A TFAP2C
5385133
chr19 2525233 rs539258302 G C
ESR1 LFA1 POLR2A REST SP1 TFAP2C
5385134
Genes possibly regulated by vista28226[chr19:2524971-2525260]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 2425622 2427892 - TIMM13 ENSG00000099800.3 2427892 0.71 1.0 16783 2921
chr19 2427636 2456994 - LMNB2 ENSG00000176619.6 2456994 0.77 1.0 16784 32023
chr19 2476120 2478257 + GADD45B ENSG00000099860.4 2476120 0.77 1.0 16785 51149
Expression level of Genes
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miRNAs possibly regulated by vista28226[chr19:2524971-2525260]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results