EnhancerDB
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  3. vista28227[chr19:2528875-2529093]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28227[chr19:2528875-2529093]
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Tissue distribution of vista28227
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Transcription factor that possibly regulate vista28227[chr19:2528875-2529093]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 2528806 2529090 NR3C1 UCSC Txn Factor no Conserved 108361313
chr19 2528890 2529193 TFAP2C UCSC Txn Factor no Conserved 108361324
chr19 2528902 2529157 CEBPB UCSC Txn Factor no Conserved 108361327
chr19 2528879 2528894 SCRT1 JASPAR yes 70783589
chr19 2528879 2528894 SCRT1 JASPAR yes 112069757
chr19 2528881 2528894 SCRT2 JASPAR yes 70783590
chr19 2528881 2528894 SCRT2 JASPAR yes 112069758
chr19 2528888 2528900 PKNOX2 JASPAR yes 70783591
chr19 2528888 2528900 TGIF2 JASPAR yes 70783592
chr19 2528888 2528900 PKNOX2 JASPAR yes 112069759
chr19 2528888 2528900 TGIF2 JASPAR yes 112069760
chr19 2528894 2528909 MEF2C JASPAR yes 70783593
chr19 2528894 2528909 MEF2C JASPAR yes 112069761
chr19 2528895 2528901 NFIC JASPAR yes 70783594
chr19 2528895 2528901 NFIC JASPAR yes 112069762
chr19 2528895 2528910 MEF2A JASPAR yes 70783595
chr19 2528895 2528910 MEF2A JASPAR yes 112069763
chr19 2528898 2528913 FOXP1 JASPAR yes 70783596
chr19 2528898 2528913 FOXP1 JASPAR yes 112069764
chr19 2528899 2528910 FOXA1 JASPAR yes 70783597
chr19 2528899 2528910 FOXA1 JASPAR yes 112069765
chr19 2528899 2528914 FOXA1 JASPAR yes 70783598
chr19 2528899 2528914 FOXA1 JASPAR yes 112069766
chr19 2528900 2528911 FOXB1 JASPAR yes 70783599
chr19 2528900 2528911 FOXC1 JASPAR yes 70783600
chr19 2528900 2528911 FOXB1 JASPAR yes 112069767
chr19 2528900 2528911 FOXC1 JASPAR yes 112069768
chr19 2528900 2528912 FOXC2 JASPAR yes 70783601
chr19 2528900 2528912 FOXC2 JASPAR yes 112069769
chr19 2528901 2528912 FOXP2 JASPAR yes 70783602
chr19 2528901 2528912 FOXP2 JASPAR yes 112069770
chr19 2528902 2528906 TEAD2 TRANSFAC yes 70783603
chr19 2528902 2528906 TEAD2 TRANSFAC yes 112069771
chr19 2528902 2528907 TBP TRANSFAC yes 70783604
chr19 2528902 2528907 TBP TRANSFAC yes 112069772
chr19 2528903 2528911 FOXG1 JASPAR yes 70783605
chr19 2528903 2528911 FOXG1 JASPAR yes 112069773
chr19 2528905 2528911 HiNF-A TRANSFAC yes 70783606
chr19 2528905 2528911 HiNF-A TRANSFAC yes 112069774
chr19 2528907 2528919 NHLH1 JASPAR yes 70783607
chr19 2528907 2528919 NHLH1 JASPAR yes 112069775
chr19 2528908 2528918 MSC JASPAR yes 70783608
chr19 2528908 2528918 NHLH1 JASPAR yes 70783609
chr19 2528908 2528918 TFAP4 JASPAR yes 70783610
chr19 2528908 2528918 MSC JASPAR yes 112069776
chr19 2528908 2528918 NHLH1 JASPAR yes 112069777
chr19 2528908 2528918 TFAP4 JASPAR yes 112069778
chr19 2528913 2528924 STAT3 JASPAR yes 70783611
chr19 2528913 2528924 STAT3 JASPAR yes 112069779
chr19 2528934 2528949 AR JASPAR yes 70783612
chr19 2528934 2528949 AR JASPAR yes 112069780
chr19 2528934 2528951 NR3C1 JASPAR yes 70783613
chr19 2528934 2528951 NR3C2 JASPAR yes 70783614
chr19 2528934 2528951 NR3C1 JASPAR yes 112069781
chr19 2528934 2528951 NR3C2 JASPAR yes 112069782
chr19 2528972 2528981 THAP1 JASPAR yes 70783615
chr19 2528972 2528981 THAP1 JASPAR yes 112069783
chr19 2528974 2528983 TFAP2A JASPAR yes 70783616
chr19 2528974 2528983 TFAP2A JASPAR yes 112069784
chr19 2529017 2529021 NFE TRANSFAC yes 70783617
chr19 2529017 2529021 NFE TRANSFAC yes 112069785
chr19 2529036 2529045 THAP1 JASPAR yes 70783618
chr19 2529036 2529045 THAP1 JASPAR yes 112069786
chr19 2529037 2529049 TFAP2A JASPAR yes 70783619
chr19 2529037 2529049 TFAP2B JASPAR yes 70783620
chr19 2529037 2529049 TFAP2C JASPAR yes 70783621
chr19 2529037 2529049 TFAP2A JASPAR yes 112069787
chr19 2529037 2529049 TFAP2B JASPAR yes 112069788
chr19 2529037 2529049 TFAP2C JASPAR yes 112069789
chr19 2529037 2529052 TFAP2A JASPAR yes 70783622
chr19 2529037 2529052 TFAP2C JASPAR yes 70783623
chr19 2529037 2529052 TFAP2A JASPAR yes 112069790
chr19 2529037 2529052 TFAP2C JASPAR yes 112069791
chr19 2529038 2529049 TFAP2A JASPAR yes 70783624
chr19 2529038 2529049 TFAP2A JASPAR yes 112069792
chr19 2529063 2529076 ATF4 JASPAR yes 70783625
chr19 2529063 2529076 ATF4 JASPAR yes 112069793
chr19 2529064 2529075 CEBPA JASPAR yes 70783626
chr19 2529064 2529075 CEBPA JASPAR yes 112069794
chr19 2529066 2529070 YY1 TRANSFAC yes 70783627
chr19 2529066 2529070 YY1 TRANSFAC yes 112069795
chr19 2529087 2529098 EBF1 JASPAR yes 70783628
chr19 2529087 2529098 EBF1 JASPAR yes 112069796
chr19 2529091 2529097 LEF1 TRANSFAC yes 70783629
chr19 2529091 2529097 LEF1 TRANSFAC yes 112069797
SNP sites on vista28227[chr19:2528875-2529093]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 2528978 rs147662493 C T
CEBPB NR3C1 TFAP2A TFAP2C THAP1
5385203
chr19 2529034 rs740054 G C
CEBPB NR3C1 TFAP2C
5385204
chr19 2529083 rs8102656 C G,T
CEBPB NR3C1 TFAP2C
5385205
Genes possibly regulated by vista28227[chr19:2528875-2529093]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 2427636 2456994 - LMNB2 ENSG00000176619.6 2456994 0.77 1.0 16784 28119
chr19 2476120 2478257 + GADD45B ENSG00000099860.4 2476120 0.77 1.0 16785 47245
Expression level of Genes
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miRNAs possibly regulated by vista28227[chr19:2528875-2529093]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results