EnhancerDB
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  3. vista28228[chr19:2529574-2529858]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28228[chr19:2529574-2529858]
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Tissue distribution of vista28228
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Transcription factor that possibly regulate vista28228[chr19:2529574-2529858]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 2529454 2529854 FOS UCSC Txn Factor no Conserved 108361433
chr19 2529521 2529805 ESR1 UCSC Txn Factor no Conserved 108361490
chr19 2529551 2529883 JUND UCSC Txn Factor no Conserved 108361506
chr19 2529555 2529871 EBF1 UCSC Txn Factor no Conserved 108361509
chr19 2529573 2529849 CEBPB UCSC Txn Factor no Conserved 108361520
chr19 2529574 2529846 NR3C1 UCSC Txn Factor no Conserved 108361521
chr19 2529573 2529578 USF2 TRANSFAC yes 70783630
chr19 2529573 2529578 USF2 TRANSFAC yes 112069886
chr19 2529575 2529590 NR2C2 JASPAR yes 70783631
chr19 2529575 2529590 NR2C2 JASPAR yes 112069887
chr19 2529576 2529590 RXRB JASPAR yes 70783632
chr19 2529576 2529590 RXRG JASPAR yes 70783633
chr19 2529576 2529590 RXRB JASPAR yes 112069888
chr19 2529576 2529590 RXRG JASPAR yes 112069889
chr19 2529581 2529596 PRDM1 JASPAR yes 70783634
chr19 2529581 2529596 PRDM1 JASPAR yes 112069890
chr19 2529626 2529641 ESR2 JASPAR yes 70783635
chr19 2529626 2529641 ESR2 JASPAR yes 112069891
chr19 2529626 2529646 ESR1 JASPAR yes 70783636
chr19 2529626 2529646 ESR1 JASPAR yes 112069892
chr19 2529629 2529633 NFE TRANSFAC yes 70783637
chr19 2529629 2529633 NFE TRANSFAC yes 112069893
chr19 2529629 2529634 GATA1 TRANSFAC yes 70783638
chr19 2529629 2529634 GATA1 TRANSFAC yes 112069894
chr19 2529639 2529653 PAX6 JASPAR yes 70783639
chr19 2529639 2529653 PAX6 JASPAR yes 112069895
chr19 2529646 2529661 JUND JASPAR yes 70783640
chr19 2529646 2529661 JUND JASPAR yes 112069896
chr19 2529647 2529652 MYC TRANSFAC yes 70783641
chr19 2529647 2529652 USF1 TRANSFAC yes 70783642
chr19 2529647 2529652 USF2 TRANSFAC yes 70783643
chr19 2529647 2529652 MYC TRANSFAC yes 112069897
chr19 2529647 2529652 USF1 TRANSFAC yes 112069898
chr19 2529647 2529652 USF2 TRANSFAC yes 112069899
chr19 2529652 2529656 H4TF2 TRANSFAC yes 70783644
chr19 2529652 2529656 H4TF2 TRANSFAC yes 112069900
chr19 2529653 2529666 ELF3 JASPAR yes 70783645
chr19 2529653 2529666 ELF3 JASPAR yes 112069901
chr19 2529654 2529658 YY1 TRANSFAC yes 70783646
chr19 2529654 2529658 YY1 TRANSFAC yes 112069902
chr19 2529654 2529665 ELF5 JASPAR yes 70783647
chr19 2529654 2529665 ELF5 JASPAR yes 112069903
chr19 2529654 2529666 EHF JASPAR yes 70783648
chr19 2529654 2529666 ELF1 JASPAR yes 70783649
chr19 2529654 2529666 EHF JASPAR yes 112069904
chr19 2529654 2529666 ELF1 JASPAR yes 112069905
chr19 2529656 2529662 ETS1 JASPAR yes 70783650
chr19 2529656 2529662 ETS1 JASPAR yes 112069906
chr19 2529664 2529676 SRF JASPAR yes 70783651
chr19 2529664 2529676 SRF JASPAR yes 112069907
chr19 2529665 2529669 YY1 TRANSFAC yes 70783652
chr19 2529665 2529669 YY1 TRANSFAC yes 112069908
chr19 2529693 2529707 EBF1 JASPAR yes 70783653
chr19 2529693 2529707 EBF1 JASPAR yes 112069909
chr19 2529695 2529706 EBF1 JASPAR yes 70783654
chr19 2529695 2529706 EBF1 JASPAR yes 112069910
chr19 2529699 2529704 TFAP2A TRANSFAC yes 70783655
chr19 2529699 2529704 TFAP2A TRANSFAC yes 112069911
chr19 2529699 2529705 MZF1 JASPAR yes 70783656
chr19 2529699 2529705 MZF1 JASPAR yes 112069912
chr19 2529710 2529723 ATF4 JASPAR yes 70783657
chr19 2529710 2529723 ATF4 JASPAR yes 112069913
chr19 2529711 2529724 JUN JASPAR yes 70783658
chr19 2529711 2529724 JUN JASPAR yes 112069914
chr19 2529718 2529735 RXRA JASPAR yes 70783659
chr19 2529718 2529735 RXRA JASPAR yes 112069915
chr19 2529734 2529747 HSF1 JASPAR yes 70783660
chr19 2529734 2529747 HSF1 JASPAR yes 112069916
chr19 2529758 2529773 JUND JASPAR yes 70783661
chr19 2529758 2529773 JUND JASPAR yes 112069917
chr19 2529759 2529772 JUN JASPAR yes 70783662
chr19 2529759 2529772 JUN JASPAR yes 112069918
chr19 2529760 2529774 ATF7 JASPAR yes 70783663
chr19 2529760 2529774 ATF7 JASPAR yes 112069919
chr19 2529761 2529773 JDP2 JASPAR yes 70783664
chr19 2529761 2529773 JDP2 JASPAR yes 112069920
chr19 2529761 2529776 JUND JASPAR yes 70783665
chr19 2529761 2529776 JUND JASPAR yes 112069921
chr19 2529763 2529771 CREB1 JASPAR yes 70783666
chr19 2529763 2529771 CREB1 JASPAR yes 112069922
chr19 2529766 2529770 ESR1 TRANSFAC yes 70783667
chr19 2529766 2529770 ESR1 TRANSFAC yes 112069923
chr19 2529792 2529797 GATA2 JASPAR yes 70783668
chr19 2529792 2529797 GATA2 JASPAR yes 112069924
chr19 2529797 2529810 SMAD2 JASPAR yes 70783669
chr19 2529797 2529810 SMAD2 JASPAR yes 112069925
chr19 2529802 2529810 TBX15 JASPAR yes 70783670
chr19 2529802 2529810 TBX1 JASPAR yes 70783671
chr19 2529802 2529810 TBX4 JASPAR yes 70783672
chr19 2529802 2529810 TBX5 JASPAR yes 70783673
chr19 2529802 2529810 TBX15 JASPAR yes 112069926
chr19 2529802 2529810 TBX1 JASPAR yes 112069927
chr19 2529802 2529810 TBX4 JASPAR yes 112069928
chr19 2529802 2529810 TBX5 JASPAR yes 112069929
chr19 2529803 2529813 ID4 JASPAR yes 70783674
chr19 2529803 2529813 MSC JASPAR yes 70783675
chr19 2529803 2529813 TCF3 JASPAR yes 70783676
chr19 2529803 2529813 TCF4 JASPAR yes 70783677
chr19 2529803 2529813 ID4 JASPAR yes 112069930
chr19 2529803 2529813 MSC JASPAR yes 112069931
chr19 2529803 2529813 TCF3 JASPAR yes 112069932
chr19 2529803 2529813 TCF4 JASPAR yes 112069933
chr19 2529804 2529813 SNAI2 JASPAR yes 70783678
chr19 2529804 2529813 SNAI2 JASPAR yes 112069934
chr19 2529805 2529810 USF2 TRANSFAC yes 70783679
chr19 2529805 2529810 USF2 TRANSFAC yes 112069935
chr19 2529821 2529833 GLI2 JASPAR yes 70783680
chr19 2529821 2529833 GLI2 JASPAR yes 112069936
chr19 2529823 2529829 TCF4 TRANSFAC yes 70783681
chr19 2529823 2529829 TCF4 TRANSFAC yes 112069937
chr19 2529830 2529850 TP53 JASPAR yes 70783682
chr19 2529830 2529850 TP53 JASPAR yes 112069938
chr19 2529834 2529849 STAT1 JASPAR yes 70783683
chr19 2529834 2529849 STAT1 JASPAR yes 112069939
chr19 2529836 2529847 STAT3 JASPAR yes 70783684
chr19 2529836 2529847 STAT3 JASPAR yes 112069940
chr19 2529842 2529856 STAT1 JASPAR yes 70783685
chr19 2529842 2529856 STAT1 JASPAR yes 112069941
chr19 2529845 2529855 NFATC3 JASPAR yes 70783686
chr19 2529845 2529855 NFATC3 JASPAR yes 112069942
chr19 2529847 2529854 NFATC2 JASPAR yes 70783687
chr19 2529847 2529854 NFATC2 JASPAR yes 112069943
chr19 2529847 2529858 NFKB1 JASPAR yes 70783688
chr19 2529847 2529858 NFKB1 JASPAR yes 112069944
chr19 2529848 2529858 RELA JASPAR yes 70783689
chr19 2529848 2529858 REL JASPAR yes 70783690
chr19 2529848 2529858 RELA JASPAR yes 112069945
chr19 2529848 2529858 REL JASPAR yes 112069946
SNP sites on vista28228[chr19:2529574-2529858]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 2529612 rs80194799 G A,C
CEBPB EBF1 ESR1 FOS JUND NR3C1
5385221
Genes possibly regulated by vista28228[chr19:2529574-2529858]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 2427636 2456994 - LMNB2 ENSG00000176619.6 2456994 0.77 1.0 16784 27420
chr19 2476120 2478257 + GADD45B ENSG00000099860.4 2476120 0.77 1.0 16785 46546
Expression level of Genes
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miRNAs possibly regulated by vista28228[chr19:2529574-2529858]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results