EnhancerDB
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  3. vista28230[chr19:2543618-2543970]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28230[chr19:2543618-2543970]
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Tissue distribution of vista28230
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Transcription factor that possibly regulate vista28230[chr19:2543618-2543970]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 2543489 2543940 CTCF UCSC Txn Factor no Conserved 108362168
chr19 2543499 2544078 TCF7L2 UCSC Txn Factor no Conserved 108362183
chr19 2543549 2543996 E2F1 UCSC Txn Factor no Conserved 108362234
chr19 2543553 2543858 STAT3 UCSC Txn Factor no Conserved 108362238
chr19 2543593 2543850 RAD21 UCSC Txn Factor no Conserved 108362279
chr19 2543624 2543954 BHLHE40 UCSC Txn Factor no Conserved 108362300
chr19 2543651 2543989 JUND UCSC Txn Factor no Conserved 108362318
chr19 2543655 2543939 FOS UCSC Txn Factor no Conserved 108362319
chr19 2543680 2543804 SMC3 UCSC Txn Factor no Conserved 108362330
chr19 2543685 2543928 FOSL2 UCSC Txn Factor no Conserved 108362334
chr19 2543609 2543630 ZNF263 JASPAR yes 70783722
chr19 2543609 2543630 ZNF263 JASPAR yes 112072246
chr19 2543623 2543634 ELK4 JASPAR yes 70783723
chr19 2543623 2543634 FLI1 JASPAR yes 70783724
chr19 2543623 2543634 ELK4 JASPAR yes 112072247
chr19 2543623 2543634 FLI1 JASPAR yes 112072248
chr19 2543624 2543634 ERF JASPAR yes 70783725
chr19 2543624 2543634 ETS1 JASPAR yes 70783726
chr19 2543624 2543634 ERF JASPAR yes 112072249
chr19 2543624 2543634 ETS1 JASPAR yes 112072250
chr19 2543624 2543635 ETV2 JASPAR yes 70783727
chr19 2543624 2543635 ETV2 JASPAR yes 112072251
chr19 2543624 2543639 STAT1 JASPAR yes 70783728
chr19 2543624 2543639 STAT1 JASPAR yes 112072252
chr19 2543626 2543637 STAT1 JASPAR yes 70783729
chr19 2543626 2543637 STAT1 JASPAR yes 112072253
chr19 2543634 2543644 TFCP2 JASPAR yes 70783730
chr19 2543634 2543644 TFCP2 JASPAR yes 112072254
chr19 2543648 2543660 INSM1 JASPAR yes 70783731
chr19 2543648 2543660 INSM1 JASPAR yes 112072255
chr19 2543653 2543663 HINFP JASPAR yes 70783732
chr19 2543653 2543663 HINFP JASPAR yes 112072256
chr19 2543665 2543679 MTF1 JASPAR yes 70783733
chr19 2543665 2543679 MTF1 JASPAR yes 112072257
chr19 2543674 2543687 ELF1 JASPAR yes 70783734
chr19 2543674 2543687 ELF1 JASPAR yes 112072258
chr19 2543677 2543687 ERF JASPAR yes 70783735
chr19 2543677 2543687 ERG JASPAR yes 70783736
chr19 2543677 2543687 ETS1 JASPAR yes 70783737
chr19 2543677 2543687 ETV3 JASPAR yes 70783738
chr19 2543677 2543687 FEV JASPAR yes 70783739
chr19 2543677 2543687 FLI1 JASPAR yes 70783740
chr19 2543677 2543687 GABPA JASPAR yes 70783741
chr19 2543677 2543687 ERF JASPAR yes 112072259
chr19 2543677 2543687 ERG JASPAR yes 112072260
chr19 2543677 2543687 ETS1 JASPAR yes 112072261
chr19 2543677 2543687 ETV3 JASPAR yes 112072262
chr19 2543677 2543687 FEV JASPAR yes 112072263
chr19 2543677 2543687 FLI1 JASPAR yes 112072264
chr19 2543677 2543687 GABPA JASPAR yes 112072265
chr19 2543677 2543688 ELK4 JASPAR yes 70783742
chr19 2543677 2543688 FLI1 JASPAR yes 70783743
chr19 2543677 2543688 ELK4 JASPAR yes 112072266
chr19 2543677 2543688 FLI1 JASPAR yes 112072267
chr19 2543678 2543686 EHF JASPAR yes 70783744
chr19 2543678 2543686 FEV JASPAR yes 70783745
chr19 2543678 2543686 EHF JASPAR yes 112072268
chr19 2543678 2543686 FEV JASPAR yes 112072269
chr19 2543679 2543686 SPI1 JASPAR yes 70783746
chr19 2543679 2543686 SPI1 JASPAR yes 112072270
chr19 2543690 2543701 NRL JASPAR yes 70783747
chr19 2543690 2543701 NRL JASPAR yes 112072271
chr19 2543715 2543730 HSF1 JASPAR yes 70783748
chr19 2543715 2543730 HSF1 JASPAR yes 112072272
chr19 2543725 2543736 STAT3 JASPAR yes 70783749
chr19 2543725 2543736 STAT3 JASPAR yes 112072273
chr19 2543746 2543751 SP1 TRANSFAC yes 70783750
chr19 2543746 2543751 SP1 TRANSFAC yes 112072274
chr19 2543758 2543765 NFATC2 JASPAR yes 70783751
chr19 2543758 2543765 NFATC2 JASPAR yes 112072275
chr19 2543767 2543786 PAX5 JASPAR yes 70783752
chr19 2543767 2543786 PAX5 JASPAR yes 112072276
chr19 2543769 2543783 TCF7L2 JASPAR yes 70783753
chr19 2543769 2543783 TCF7L2 JASPAR yes 112072277
chr19 2543808 2543822 JUN JASPAR yes 70783754
chr19 2543808 2543822 JUN JASPAR yes 112072278
chr19 2543811 2543822 FOSL2 JASPAR yes 70783755
chr19 2543811 2543822 JUNB JASPAR yes 70783756
chr19 2543811 2543822 FOSL2 JASPAR yes 112072279
chr19 2543811 2543822 JUNB JASPAR yes 112072280
chr19 2543811 2543826 ESR2 JASPAR yes 70783757
chr19 2543811 2543826 ESR2 JASPAR yes 112072281
chr19 2543812 2543823 FOS JASPAR yes 70783758
chr19 2543812 2543823 FOSL1 JASPAR yes 70783759
chr19 2543812 2543823 JUND JASPAR yes 70783760
chr19 2543812 2543823 NFE2 JASPAR yes 70783761
chr19 2543812 2543823 FOS JASPAR yes 112072282
chr19 2543812 2543823 FOSL1 JASPAR yes 112072283
chr19 2543812 2543823 JUND JASPAR yes 112072284
chr19 2543812 2543823 NFE2 JASPAR yes 112072285
chr19 2543813 2543824 FOSL2 JASPAR yes 70783762
chr19 2543813 2543824 JUNB JASPAR yes 70783763
chr19 2543813 2543824 NFE2L2 JASPAR yes 70783764
chr19 2543813 2543824 FOSL2 JASPAR yes 112072286
chr19 2543813 2543824 JUNB JASPAR yes 112072287
chr19 2543813 2543824 NFE2L2 JASPAR yes 112072288
chr19 2543813 2543827 JUN JASPAR yes 70783765
chr19 2543813 2543827 JUN JASPAR yes 112072289
chr19 2543814 2543821 JUN TRANSFAC yes 70783766
chr19 2543814 2543821 JUN TRANSFAC yes 112072290
chr19 2543814 2543825 BATF JASPAR yes 70783767
chr19 2543814 2543825 BATF JASPAR yes 112072291
chr19 2543817 2543832 TFAP2A JASPAR yes 70783768
chr19 2543817 2543832 TFAP2A JASPAR yes 112072292
chr19 2543820 2543832 TFAP2A JASPAR yes 70783769
chr19 2543820 2543832 TFAP2B JASPAR yes 70783770
chr19 2543820 2543832 TFAP2C JASPAR yes 70783771
chr19 2543820 2543832 TFAP2A JASPAR yes 112072293
chr19 2543820 2543832 TFAP2B JASPAR yes 112072294
chr19 2543820 2543832 TFAP2C JASPAR yes 112072295
chr19 2543820 2543834 EBF1 JASPAR yes 70783772
chr19 2543820 2543834 EBF1 JASPAR yes 112072296
chr19 2543820 2543835 TFAP2A JASPAR yes 70783773
chr19 2543820 2543835 TFAP2C JASPAR yes 70783774
chr19 2543820 2543835 TFAP2A JASPAR yes 112072297
chr19 2543820 2543835 TFAP2C JASPAR yes 112072298
chr19 2543821 2543830 TFAP2A JASPAR yes 70783775
chr19 2543821 2543830 TFAP2A JASPAR yes 112072299
chr19 2543825 2543843 ESR2 JASPAR yes 70783776
chr19 2543825 2543843 ESR2 JASPAR yes 112072300
chr19 2543826 2543846 ESR1 JASPAR yes 70783777
chr19 2543826 2543846 ESR1 JASPAR yes 112072301
chr19 2543828 2543833 ETS2 TRANSFAC yes 70783778
chr19 2543828 2543833 ETS2 TRANSFAC yes 112072302
chr19 2543833 2543844 ESRRB JASPAR yes 70783779
chr19 2543833 2543844 ESRRB JASPAR yes 112072303
chr19 2543836 2543849 TFAP2B JASPAR yes 70783780
chr19 2543836 2543849 TFAP2B JASPAR yes 112072304
chr19 2543843 2543854 E2F1 JASPAR yes 70783781
chr19 2543843 2543854 E2F1 JASPAR yes 112072305
chr19 2543844 2543849 SP1 TRANSFAC yes 70783782
chr19 2543844 2543849 SP1 TRANSFAC yes 112072306
chr19 2543844 2543855 E2F4 JASPAR yes 70783783
chr19 2543844 2543855 E2F6 JASPAR yes 70783784
chr19 2543844 2543855 E2F4 JASPAR yes 112072307
chr19 2543844 2543855 E2F6 JASPAR yes 112072308
chr19 2543845 2543850 SP1 TRANSFAC yes 70783785
chr19 2543845 2543850 SP1 TRANSFAC yes 112072309
chr19 2543848 2543854 MAZ TRANSFAC yes 70783786
chr19 2543848 2543854 MAZ TRANSFAC yes 112072310
chr19 2543853 2543858 SP1 TRANSFAC yes 70783787
chr19 2543853 2543858 SP1 TRANSFAC yes 112072311
chr19 2543907 2543922 HSF1 JASPAR yes 70783788
chr19 2543907 2543922 HSF1 JASPAR yes 112072312
chr19 2543908 2543921 HSF1 JASPAR yes 70783789
chr19 2543908 2543921 HSF2 JASPAR yes 70783790
chr19 2543908 2543921 HSF4 JASPAR yes 70783791
chr19 2543908 2543921 HSF1 JASPAR yes 112072313
chr19 2543908 2543921 HSF2 JASPAR yes 112072314
chr19 2543908 2543921 HSF4 JASPAR yes 112072315
chr19 2543928 2543939 CDX2 JASPAR yes 70783792
chr19 2543928 2543939 CDX2 JASPAR yes 112072316
chr19 2543958 2543969 EBF1 JASPAR yes 70783793
chr19 2543958 2543969 EBF1 JASPAR yes 112072317
SNP sites on vista28230[chr19:2543618-2543970]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 2543621 rs11879623 T C
CTCF E2F1 RAD21 STAT3 TCF7L2 ZNF263
5385493
chr19 2543626 rs138267518 G C,T
BHLHE40 CTCF E2F1 ELK4 ERF ETS1 ETV2 FLI1 RAD21 STAT1 STAT3 TCF7L2 ZNF263
5385494
chr19 2543632 rs550026024 T A,C
BHLHE40 CTCF E2F1 ELK4 ERF ETS1 ETV2 FLI1 RAD21 STAT1 STAT3 TCF7L2
5385495
chr19 2543657 rs11881553 G T
BHLHE40 CTCF E2F1 FOS HINFP INSM1 JUND RAD21 STAT3 TCF7L2
5385496
chr19 2543675 rs373333489 G A
BHLHE40 CTCF E2F1 ELF1 FOS JUND MTF1 RAD21 STAT3 TCF7L2
5385497
chr19 2543697 rs113491756 G A
BHLHE40 CTCF E2F1 FOS FOSL2 JUND NRL RAD21 SMC3 STAT3 TCF7L2
5385498
chr19 2543771 rs562683908 C T
BHLHE40 CTCF E2F1 FOS FOSL2 JUND PAX5 RAD21 SMC3 STAT3 TCF7L2
5385499
chr19 2543823 rs182080697 C G
BATF BHLHE40 CTCF E2F1 EBF1 ESR2 FOS FOSL1 FOSL2 JUN JUNB JUND NFE2 NFE2L2 RAD21 STAT3 TCF7L2 TFAP2A TFAP2B TFAP2C
5385500
chr19 2543838 rs60154733 G T
BHLHE40 CTCF E2F1 ESR1 ESR2 ESRRB FOS FOSL2 JUND RAD21 STAT3 TCF7L2 TFAP2B
5385501
chr19 2543970 rs13345850 G T
E2F1 JUND TCF7L2
5385502
Genes possibly regulated by vista28230[chr19:2543618-2543970]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 2427636 2456994 - LMNB2 ENSG00000176619.6 2456994 0.77 1.0 16784 13376
chr19 2476120 2478257 + GADD45B ENSG00000099860.4 2476120 0.77 1.0 16785 32502
Expression level of Genes
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miRNAs possibly regulated by vista28230[chr19:2543618-2543970]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results