EnhancerDB
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  3. vista28231[chr19:2544084-2544261]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28231[chr19:2544084-2544261]
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Tissue distribution of vista28231
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Transcription factor that possibly regulate vista28231[chr19:2544084-2544261]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 2544007 2544317 NR3C1 UCSC Txn Factor no Conserved 108362350
chr19 2544092 2544106 XBP1 JASPAR yes 70783794
chr19 2544092 2544106 XBP1 JASPAR yes 112072338
chr19 2544098 2544103 ATF1 TRANSFAC yes 70783795
chr19 2544098 2544103 ATF1 TRANSFAC yes 112072339
chr19 2544134 2544149 AR JASPAR yes 70783796
chr19 2544134 2544149 AR JASPAR yes 112072340
chr19 2544134 2544151 NR3C1 JASPAR yes 70783797
chr19 2544134 2544151 NR3C2 JASPAR yes 70783798
chr19 2544134 2544151 NR3C1 JASPAR yes 112072341
chr19 2544134 2544151 NR3C2 JASPAR yes 112072342
chr19 2544164 2544175 TBX20 JASPAR yes 70783799
chr19 2544164 2544175 TBX20 JASPAR yes 112072343
chr19 2544171 2544179 FOXL1 JASPAR yes 70783800
chr19 2544171 2544179 FOXL1 JASPAR yes 112072344
chr19 2544173 2544181 FOXO3 JASPAR yes 70783801
chr19 2544173 2544181 FOXO3 JASPAR yes 112072345
chr19 2544180 2544187 SPIB JASPAR yes 70783802
chr19 2544180 2544187 SPIB JASPAR yes 112072346
chr19 2544193 2544205 IRF1 JASPAR yes 70783803
chr19 2544193 2544205 IRF1 JASPAR yes 112072347
chr19 2544196 2544208 FOXI1 JASPAR yes 70783804
chr19 2544196 2544208 FOXI1 JASPAR yes 112072348
chr19 2544203 2544215 YY1 JASPAR yes 70783805
chr19 2544203 2544215 YY1 JASPAR yes 112072349
chr19 2544211 2544221 MYF6 JASPAR yes 70783806
chr19 2544211 2544221 MYF6 JASPAR yes 112072350
chr19 2544258 2544270 PROX1 JASPAR yes 70783807
chr19 2544258 2544270 PROX1 JASPAR yes 112072351
SNP sites on vista28231[chr19:2544084-2544261]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 2544122 rs184874892 G A
NR3C1
5385504
chr19 2544137 rs77752184 G A,T
AR NR3C1 NR3C2
5385505
chr19 2544194 rs78877182 C A
IRF1 NR3C1
5385506
Genes possibly regulated by vista28231[chr19:2544084-2544261]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 2427636 2456994 - LMNB2 ENSG00000176619.6 2456994 0.77 1.0 16784 12910
chr19 2476120 2478257 + GADD45B ENSG00000099860.4 2476120 0.77 1.0 16785 32036
Expression level of Genes
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miRNAs possibly regulated by vista28231[chr19:2544084-2544261]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results