EnhancerDB
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  3. vista28234[chr19:2561938-2562231]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28234[chr19:2561938-2562231]
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Tissue distribution of vista28234
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Transcription factor that possibly regulate vista28234[chr19:2561938-2562231]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 2561838 2562308 EBF1 UCSC Txn Factor no Conserved 108362461
chr19 2561882 2562318 ATF2 UCSC Txn Factor no Conserved 108362487
chr19 2561883 2562280 TCF12 UCSC Txn Factor no Conserved 108362489
chr19 2561896 2562293 BCL3 UCSC Txn Factor no Conserved 108362495
chr19 2561900 2562311 RUNX3 UCSC Txn Factor no Conserved 108362501
chr19 2561926 2561938 NHLH1 JASPAR yes 70783999
chr19 2561926 2561938 NHLH1 JASPAR yes 112075170
chr19 2561933 2561948 HNF4G JASPAR yes 70784000
chr19 2561933 2561948 HNF4G JASPAR yes 112075172
chr19 2561934 2561949 HNF4A JASPAR yes 70784001
chr19 2561934 2561949 HNF4A JASPAR yes 112075173
chr19 2561943 2561952 HIC2 JASPAR yes 70784002
chr19 2561943 2561952 HIC2 JASPAR yes 112075174
chr19 2561944 2561963 CTCF JASPAR yes 70784003
chr19 2561944 2561963 CTCF JASPAR yes 112075175
chr19 2561955 2561965 NHLH1 JASPAR yes 70784004
chr19 2561955 2561965 NHLH1 JASPAR yes 112075176
chr19 2561958 2561973 TFAP2A JASPAR yes 70784005
chr19 2561958 2561973 TFAP2C JASPAR yes 70784006
chr19 2561958 2561973 TFAP2A JASPAR yes 112075177
chr19 2561958 2561973 TFAP2C JASPAR yes 112075178
chr19 2561960 2561966 NFE2 TRANSFAC yes 70784007
chr19 2561960 2561966 NFE2 TRANSFAC yes 112075179
chr19 2561961 2561973 TFAP2A JASPAR yes 70784008
chr19 2561961 2561973 TFAP2B JASPAR yes 70784009
chr19 2561961 2561973 TFAP2C JASPAR yes 70784010
chr19 2561961 2561973 TFAP2A JASPAR yes 112075180
chr19 2561961 2561973 TFAP2B JASPAR yes 112075181
chr19 2561961 2561973 TFAP2C JASPAR yes 112075182
chr19 2561961 2561976 TFAP2A JASPAR yes 70784011
chr19 2561961 2561976 TFAP2C JASPAR yes 70784012
chr19 2561961 2561976 TFAP2A JASPAR yes 112075183
chr19 2561961 2561976 TFAP2C JASPAR yes 112075184
chr19 2561962 2561971 TFAP2A JASPAR yes 70784013
chr19 2561962 2561971 TFAP2A JASPAR yes 112075185
chr19 2561963 2561972 TFAP2A JASPAR yes 70784014
chr19 2561963 2561972 TFAP2A JASPAR yes 112075186
chr19 2561979 2561992 ELF1 JASPAR yes 70784015
chr19 2561979 2561992 ELF1 JASPAR yes 112075187
chr19 2561979 2561993 STAT1 JASPAR yes 70784016
chr19 2561979 2561993 STAT1 JASPAR yes 112075188
chr19 2561981 2561992 ETV2 JASPAR yes 70784017
chr19 2561981 2561992 ETV2 JASPAR yes 112075189
chr19 2562029 2562042 NFKB1 JASPAR yes 70784018
chr19 2562029 2562042 NFKB2 JASPAR yes 70784019
chr19 2562029 2562042 NFKB1 JASPAR yes 112075190
chr19 2562029 2562042 NFKB2 JASPAR yes 112075191
chr19 2562031 2562041 GSC JASPAR yes 70784020
chr19 2562031 2562041 NFKB1 JASPAR yes 70784021
chr19 2562031 2562041 REL JASPAR yes 70784022
chr19 2562031 2562041 GSC JASPAR yes 112075192
chr19 2562031 2562041 NFKB1 JASPAR yes 112075193
chr19 2562031 2562041 REL JASPAR yes 112075194
chr19 2562037 2562047 SP1 JASPAR yes 70784023
chr19 2562037 2562047 SP1 JASPAR yes 112075195
chr19 2562037 2562048 FLI1 JASPAR yes 70784024
chr19 2562037 2562048 FLI1 JASPAR yes 112075196
chr19 2562038 2562048 SP1 JASPAR yes 70784025
chr19 2562038 2562048 SP1 JASPAR yes 112075197
chr19 2562039 2562047 EHF JASPAR yes 70784026
chr19 2562039 2562047 EHF JASPAR yes 112075198
chr19 2562050 2562054 YY1 TRANSFAC yes 70784027
chr19 2562050 2562054 YY1 TRANSFAC yes 112075199
chr19 2562080 2562091 STAT1 JASPAR yes 70784028
chr19 2562080 2562091 STAT3 JASPAR yes 70784029
chr19 2562080 2562091 STAT1 JASPAR yes 112075200
chr19 2562080 2562091 STAT3 JASPAR yes 112075201
chr19 2562096 2562108 HINFP JASPAR yes 70784030
chr19 2562096 2562108 HINFP JASPAR yes 112075202
chr19 2562099 2562103 H4TF2 TRANSFAC yes 70784031
chr19 2562099 2562103 H4TF2 TRANSFAC yes 112075203
chr19 2562105 2562109 LFA1 TRANSFAC yes 70784032
chr19 2562105 2562109 LFA1 TRANSFAC yes 112075204
chr19 2562117 2562122 SP1 TRANSFAC yes 70784033
chr19 2562117 2562122 SP1 TRANSFAC yes 112075205
chr19 2562146 2562149 MYB TRANSFAC yes 70784034
chr19 2562146 2562149 MYB TRANSFAC yes 112075206
chr19 2562148 2562162 EBF1 JASPAR yes 70784035
chr19 2562148 2562162 EBF1 JASPAR yes 112075207
chr19 2562182 2562196 JUN JASPAR yes 70784036
chr19 2562182 2562196 JUN JASPAR yes 112075208
chr19 2562185 2562196 FOSL2 JASPAR yes 70784037
chr19 2562185 2562196 JUNB JASPAR yes 70784038
chr19 2562185 2562196 FOSL2 JASPAR yes 112075209
chr19 2562185 2562196 JUNB JASPAR yes 112075210
chr19 2562186 2562197 FOS JASPAR yes 70784039
chr19 2562186 2562197 FOSL1 JASPAR yes 70784040
chr19 2562186 2562197 JUND JASPAR yes 70784041
chr19 2562186 2562197 NFE2 JASPAR yes 70784042
chr19 2562186 2562197 FOS JASPAR yes 112075211
chr19 2562186 2562197 FOSL1 JASPAR yes 112075212
chr19 2562186 2562197 JUND JASPAR yes 112075213
chr19 2562186 2562197 NFE2 JASPAR yes 112075214
chr19 2562187 2562196 JDP2 JASPAR yes 70784043
chr19 2562187 2562196 JDP2 JASPAR yes 112075215
chr19 2562187 2562198 FOSL2 JASPAR yes 70784044
chr19 2562187 2562198 JUNB JASPAR yes 70784045
chr19 2562187 2562198 FOSL2 JASPAR yes 112075216
chr19 2562187 2562198 JUNB JASPAR yes 112075217
chr19 2562187 2562201 JUN JASPAR yes 70784046
chr19 2562187 2562201 JUN JASPAR yes 112075218
chr19 2562187 2562205 ESR1 JASPAR yes 70784047
chr19 2562187 2562205 ESR1 JASPAR yes 112075219
chr19 2562216 2562220 H4TF2 TRANSFAC yes 70784048
chr19 2562216 2562220 H4TF2 TRANSFAC yes 112075220
chr19 2562218 2562224 MZF1 JASPAR yes 70784049
chr19 2562218 2562224 MZF1 JASPAR yes 112075221
chr19 2562219 2562228 ZEB1 JASPAR yes 70784050
chr19 2562219 2562228 ZEB1 JASPAR yes 112075222
chr19 2562219 2562231 NHLH1 JASPAR yes 70784051
chr19 2562219 2562231 NHLH1 JASPAR yes 112075223
chr19 2562220 2562230 TCF3 JASPAR yes 70784052
chr19 2562220 2562230 TCF4 JASPAR yes 70784053
chr19 2562220 2562230 TCF3 JASPAR yes 112075224
chr19 2562220 2562230 TCF4 JASPAR yes 112075225
chr19 2562221 2562230 SNAI2 JASPAR yes 70784054
chr19 2562221 2562230 SNAI2 JASPAR yes 112075226
chr19 2562222 2562227 USF2 TRANSFAC yes 70784055
chr19 2562222 2562227 USF2 TRANSFAC yes 112075227
chr19 2562230 2562242 INSM1 JASPAR yes 70784056
chr19 2562230 2562242 INSM1 JASPAR yes 112075228
SNP sites on vista28234[chr19:2561938-2562231]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 2562013 rs529596665 CT C
ATF2 BCL3 EBF1 RUNX3 TCF12
5385946
chr19 2562028 rs372219011 A C
ATF2 BCL3 EBF1 RUNX3 TCF12
5385947
chr19 2562075 rs191256054 G A
ATF2 BCL3 EBF1 RUNX3 TCF12
5385948
Genes possibly regulated by vista28234[chr19:2561938-2562231]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 2476120 2478257 + GADD45B ENSG00000099860.4 2476120 0.77 1.0 16785 14182
Expression level of Genes
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miRNAs possibly regulated by vista28234[chr19:2561938-2562231]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results