EnhancerDB
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  3. vista28236[chr19:2588002-2588286]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28236[chr19:2588002-2588286]
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Tissue distribution of vista28236
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Transcription factor that possibly regulate vista28236[chr19:2588002-2588286]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 2588000 2588009 SRY JASPAR yes 70784103
chr19 2588000 2588009 SRY JASPAR yes 112078737
chr19 2588021 2588040 PAX5 JASPAR yes 70784104
chr19 2588021 2588040 PAX5 JASPAR yes 112078738
chr19 2588023 2588027 LFA1 TRANSFAC yes 70784105
chr19 2588023 2588027 LFA1 TRANSFAC yes 112078739
chr19 2588028 2588037 HIC2 JASPAR yes 70784106
chr19 2588028 2588037 HIC2 JASPAR yes 112078740
chr19 2588031 2588035 LFA1 TRANSFAC yes 70784107
chr19 2588031 2588035 LFA1 TRANSFAC yes 112078741
chr19 2588037 2588058 IRF1 JASPAR yes 70784108
chr19 2588037 2588058 IRF1 JASPAR yes 112078742
chr19 2588038 2588049 ETV2 JASPAR yes 70784109
chr19 2588038 2588049 ETV2 JASPAR yes 112078743
chr19 2588038 2588059 IRF1 JASPAR yes 70784110
chr19 2588038 2588059 IRF1 JASPAR yes 112078744
chr19 2588039 2588050 FLI1 JASPAR yes 70784111
chr19 2588039 2588050 FLI1 JASPAR yes 112078745
chr19 2588040 2588045 ETS2 TRANSFAC yes 70784112
chr19 2588040 2588045 ETS2 TRANSFAC yes 112078746
chr19 2588040 2588048 FEV JASPAR yes 70784113
chr19 2588040 2588048 FEV JASPAR yes 112078747
chr19 2588042 2588057 STAT2 JASPAR yes 70784114
chr19 2588042 2588057 STAT2 JASPAR yes 112078748
chr19 2588060 2588065 NFY TRANSFAC yes 70784115
chr19 2588060 2588065 NFY TRANSFAC yes 112078749
chr19 2588091 2588095 YY1 TRANSFAC yes 70784116
chr19 2588091 2588095 YY1 TRANSFAC yes 112078750
chr19 2588093 2588107 MTF1 JASPAR yes 70784117
chr19 2588093 2588107 MTF1 JASPAR yes 112078751
chr19 2588112 2588126 RXRB JASPAR yes 70784118
chr19 2588112 2588126 RXRB JASPAR yes 112078752
chr19 2588121 2588125 H4TF2 TRANSFAC yes 70784119
chr19 2588121 2588125 H4TF2 TRANSFAC yes 112078753
chr19 2588128 2588143 AR JASPAR yes 70784120
chr19 2588128 2588143 AR JASPAR yes 112078754
chr19 2588128 2588145 NR3C1 JASPAR yes 70784121
chr19 2588128 2588145 NR3C2 JASPAR yes 70784122
chr19 2588128 2588145 NR3C1 JASPAR yes 112078755
chr19 2588128 2588145 NR3C2 JASPAR yes 112078756
chr19 2588134 2588142 HOXA5 JASPAR yes 70784123
chr19 2588134 2588142 HOXA5 JASPAR yes 112078757
chr19 2588155 2588164 NKX2-8 JASPAR yes 70784124
chr19 2588155 2588164 NKX2-8 JASPAR yes 112078758
chr19 2588167 2588178 STAT3 JASPAR yes 70784125
chr19 2588167 2588178 STAT3 JASPAR yes 112078759
chr19 2588187 2588198 EBF1 JASPAR yes 70784126
chr19 2588187 2588198 EBF1 JASPAR yes 112078760
chr19 2588203 2588207 YY1 TRANSFAC yes 70784127
chr19 2588203 2588207 YY1 TRANSFAC yes 112078761
chr19 2588218 2588223 SP1 TRANSFAC yes 70784128
chr19 2588218 2588223 SP1 TRANSFAC yes 112078762
SNP sites on vista28236[chr19:2588002-2588286]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 2588124 rs575532514 T C
H4TF2 RXRB
5386489
chr19 2588242 rs149649470 G A no 5386490
Genes possibly regulated by vista28236[chr19:2588002-2588286]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista28236[chr19:2588002-2588286]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results