EnhancerDB
  1. Home
  2. Enhancers
  3. vista28238[chr19:2599036-2599584]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28238[chr19:2599036-2599584]
Back to top
Tissue distribution of vista28238
Back to top
Transcription factor that possibly regulate vista28238[chr19:2599036-2599584]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 2598731 2599844 POLR2A UCSC Txn Factor no Conserved 108363017
chr19 2598943 2599409 MAX UCSC Txn Factor no Conserved 108363126
chr19 2599011 2599306 USF2 UCSC Txn Factor no Conserved 108363164
chr19 2599057 2599271 USF1 UCSC Txn Factor no Conserved 108363185
chr19 2599028 2599037 HIC2 JASPAR yes 70784133
chr19 2599028 2599037 HIC2 JASPAR yes 112080610
chr19 2599063 2599073 NFATC3 JASPAR yes 70784134
chr19 2599063 2599073 NFATC3 JASPAR yes 112080612
chr19 2599065 2599072 NFATC2 JASPAR yes 70784135
chr19 2599065 2599072 NFATC2 JASPAR yes 112080613
chr19 2599074 2599078 H1TF2 TRANSFAC yes 70784136
chr19 2599074 2599078 NFE TRANSFAC yes 70784137
chr19 2599074 2599078 SRF TRANSFAC yes 70784138
chr19 2599074 2599078 H1TF2 TRANSFAC yes 112080614
chr19 2599074 2599078 NFE TRANSFAC yes 112080615
chr19 2599074 2599078 SRF TRANSFAC yes 112080616
chr19 2599074 2599085 ESRRA JASPAR yes 70784139
chr19 2599074 2599085 ESRRA JASPAR yes 112080617
chr19 2599094 2599098 YY1 TRANSFAC yes 70784140
chr19 2599094 2599098 YY1 TRANSFAC yes 112080618
chr19 2599105 2599111 MAZ TRANSFAC yes 70784141
chr19 2599105 2599111 MAZ TRANSFAC yes 112080619
chr19 2599107 2599128 ZNF263 JASPAR yes 70784142
chr19 2599107 2599128 ZNF263 JASPAR yes 112080620
chr19 2599120 2599125 SP1 TRANSFAC yes 70784143
chr19 2599120 2599125 SP1 TRANSFAC yes 112080621
chr19 2599152 2599166 ZIC1 JASPAR yes 70784144
chr19 2599152 2599166 ZIC1 JASPAR yes 112080622
chr19 2599152 2599167 ZIC4 JASPAR yes 70784145
chr19 2599152 2599167 ZIC4 JASPAR yes 112080623
chr19 2599154 2599164 MAX JASPAR yes 70784146
chr19 2599154 2599164 MAX JASPAR yes 112080624
chr19 2599155 2599165 CLOCK JASPAR yes 70784147
chr19 2599155 2599165 FIGLA JASPAR yes 70784148
chr19 2599155 2599165 MAX JASPAR yes 70784149
chr19 2599155 2599165 MLX JASPAR yes 70784150
chr19 2599155 2599165 MNT JASPAR yes 70784151
chr19 2599155 2599165 CLOCK JASPAR yes 112080625
chr19 2599155 2599165 FIGLA JASPAR yes 112080626
chr19 2599155 2599165 MAX JASPAR yes 112080627
chr19 2599155 2599165 MLX JASPAR yes 112080628
chr19 2599155 2599165 MNT JASPAR yes 112080629
chr19 2599156 2599163 USF1 JASPAR yes 70784152
chr19 2599156 2599163 USF1 JASPAR yes 112080630
chr19 2599156 2599166 MAX JASPAR yes 70784153
chr19 2599156 2599166 MAX JASPAR yes 112080631
chr19 2599157 2599162 MYC TRANSFAC yes 70784154
chr19 2599157 2599162 USF1 TRANSFAC yes 70784155
chr19 2599157 2599162 USF2 TRANSFAC yes 70784156
chr19 2599157 2599162 MYC TRANSFAC yes 112080632
chr19 2599157 2599162 USF1 TRANSFAC yes 112080633
chr19 2599157 2599162 USF2 TRANSFAC yes 112080634
chr19 2599157 2599164 USF1 JASPAR yes 70784157
chr19 2599157 2599164 USF1 JASPAR yes 112080635
chr19 2599199 2599205 TCF4 TRANSFAC yes 70784158
chr19 2599199 2599205 TCF4 TRANSFAC yes 112080636
chr19 2599204 2599208 NFE TRANSFAC yes 70784159
chr19 2599204 2599208 NFE TRANSFAC yes 112080637
chr19 2599231 2599246 NR2C2 JASPAR yes 70784160
chr19 2599231 2599246 NR2C2 JASPAR yes 112080638
chr19 2599232 2599247 PRDM1 JASPAR yes 70784161
chr19 2599232 2599247 PRDM1 JASPAR yes 112080639
chr19 2599236 2599246 MZF1 JASPAR yes 70784162
chr19 2599236 2599246 MZF1 JASPAR yes 112080640
chr19 2599262 2599266 NFE TRANSFAC yes 70784163
chr19 2599262 2599266 NFE TRANSFAC yes 112080641
chr19 2599262 2599275 SMAD2 JASPAR yes 70784164
chr19 2599262 2599275 SMAD2 JASPAR yes 112080642
chr19 2599266 2599270 NFE TRANSFAC yes 70784165
chr19 2599266 2599270 NFE TRANSFAC yes 112080643
chr19 2599278 2599283 GATA1 TRANSFAC yes 70784166
chr19 2599278 2599283 GATA1 TRANSFAC yes 112080644
chr19 2599289 2599300 RUNX1 JASPAR yes 70784167
chr19 2599289 2599300 RUNX1 JASPAR yes 112080645
chr19 2599293 2599308 STAT2 JASPAR yes 70784168
chr19 2599293 2599308 STAT2 JASPAR yes 112080646
chr19 2599309 2599320 FOXA1 JASPAR yes 70784169
chr19 2599309 2599320 FOXA1 JASPAR yes 112080647
chr19 2599326 2599347 ZNF263 JASPAR yes 70784170
chr19 2599326 2599347 ZNF263 JASPAR yes 112080648
chr19 2599333 2599343 SP1 JASPAR yes 70784171
chr19 2599333 2599343 SP1 JASPAR yes 112080649
chr19 2599333 2599344 FLI1 JASPAR yes 70784172
chr19 2599333 2599344 FLI1 JASPAR yes 112080650
chr19 2599334 2599344 SP1 JASPAR yes 70784173
chr19 2599334 2599344 SP1 JASPAR yes 112080651
chr19 2599335 2599343 EHF JASPAR yes 70784174
chr19 2599335 2599343 EHF JASPAR yes 112080652
chr19 2599364 2599376 FOXI1 JASPAR yes 70784175
chr19 2599364 2599376 FOXI1 JASPAR yes 112080653
chr19 2599374 2599386 NHLH1 JASPAR yes 70784176
chr19 2599374 2599386 NHLH1 JASPAR yes 112080654
chr19 2599375 2599385 TFAP4 JASPAR yes 70784177
chr19 2599375 2599385 TFAP4 JASPAR yes 112080655
chr19 2599375 2599387 TAL1 JASPAR yes 70784178
chr19 2599375 2599387 TAL1 JASPAR yes 112080656
chr19 2599382 2599387 SP1 TRANSFAC yes 70784179
chr19 2599382 2599387 SP1 TRANSFAC yes 112080657
chr19 2599384 2599389 TFAP2A TRANSFAC yes 70784180
chr19 2599384 2599389 TFAP2A TRANSFAC yes 112080658
chr19 2599384 2599390 MZF1 JASPAR yes 70784181
chr19 2599384 2599390 MZF1 JASPAR yes 112080659
chr19 2599386 2599391 ETS2 TRANSFAC yes 70784182
chr19 2599386 2599391 ETS2 TRANSFAC yes 112080660
chr19 2599394 2599398 YY1 TRANSFAC yes 70784183
chr19 2599394 2599398 YY1 TRANSFAC yes 112080661
chr19 2599399 2599418 REST JASPAR yes 70784184
chr19 2599399 2599418 REST JASPAR yes 112080662
chr19 2599406 2599418 E2F8 JASPAR yes 70784185
chr19 2599406 2599418 E2F8 JASPAR yes 112080663
chr19 2599408 2599419 E2F4 JASPAR yes 70784186
chr19 2599408 2599419 E2F6 JASPAR yes 70784187
chr19 2599408 2599419 E2F4 JASPAR yes 112080664
chr19 2599408 2599419 E2F6 JASPAR yes 112080665
chr19 2599409 2599414 SP1 TRANSFAC yes 70784188
chr19 2599409 2599414 SP1 TRANSFAC yes 112080666
chr19 2599423 2599428 SP1 TRANSFAC yes 70784189
chr19 2599423 2599428 SP1 TRANSFAC yes 112080667
chr19 2599434 2599439 SP1 TRANSFAC yes 70784190
chr19 2599434 2599439 SP1 TRANSFAC yes 112080668
chr19 2599435 2599445 RELA JASPAR yes 70784191
chr19 2599435 2599445 RELA JASPAR yes 112080669
chr19 2599438 2599453 STAT1 JASPAR yes 70784192
chr19 2599438 2599453 STAT1 JASPAR yes 112080670
chr19 2599440 2599459 CTCF JASPAR yes 70784193
chr19 2599440 2599459 CTCF JASPAR yes 112080671
chr19 2599456 2599468 HINFP JASPAR yes 70784194
chr19 2599456 2599468 HINFP JASPAR yes 112080672
chr19 2599464 2599474 SP1 JASPAR yes 70784195
chr19 2599464 2599474 SP1 JASPAR yes 112080673
chr19 2599466 2599472 MAZ TRANSFAC yes 70784196
chr19 2599466 2599472 MAZ TRANSFAC yes 112080674
chr19 2599466 2599476 SP1 JASPAR yes 70784197
chr19 2599466 2599476 SP1 JASPAR yes 112080675
chr19 2599472 2599477 SP1 TRANSFAC yes 70784198
chr19 2599472 2599477 SP1 TRANSFAC yes 112080676
chr19 2599472 2599486 PLAG1 JASPAR yes 70784199
chr19 2599472 2599486 PLAG1 JASPAR yes 112080677
chr19 2599474 2599486 TFAP2A JASPAR yes 70784200
chr19 2599474 2599486 TFAP2B JASPAR yes 70784201
chr19 2599474 2599486 TFAP2C JASPAR yes 70784202
chr19 2599474 2599486 TFAP2A JASPAR yes 112080678
chr19 2599474 2599486 TFAP2B JASPAR yes 112080679
chr19 2599474 2599486 TFAP2C JASPAR yes 112080680
chr19 2599474 2599489 TFAP2A JASPAR yes 70784203
chr19 2599474 2599489 TFAP2C JASPAR yes 70784204
chr19 2599474 2599489 TFAP2A JASPAR yes 112080681
chr19 2599474 2599489 TFAP2C JASPAR yes 112080682
chr19 2599476 2599485 TFAP2A JASPAR yes 70784205
chr19 2599476 2599485 TFAP2A JASPAR yes 112080683
chr19 2599481 2599485 LFA1 TRANSFAC yes 70784206
chr19 2599481 2599485 LFA1 TRANSFAC yes 112080684
chr19 2599515 2599527 PKNOX2 JASPAR yes 70784207
chr19 2599515 2599527 PKNOX2 JASPAR yes 112080685
chr19 2599515 2599528 JUN JASPAR yes 70784208
chr19 2599515 2599528 JUN JASPAR yes 112080686
chr19 2599517 2599529 JDP2 JASPAR yes 70784209
chr19 2599517 2599529 JDP2 JASPAR yes 112080687
chr19 2599548 2599552 YY1 TRANSFAC yes 70784210
chr19 2599548 2599552 YY1 TRANSFAC yes 112080688
chr19 2599556 2599569 SCRT2 JASPAR yes 70784211
chr19 2599556 2599569 SCRT2 JASPAR yes 112080689
chr19 2599566 2599581 RUNX2 JASPAR yes 70784212
chr19 2599566 2599581 RUNX2 JASPAR yes 112080690
chr19 2599572 2599587 RUNX2 JASPAR yes 70784213
chr19 2599572 2599587 RUNX2 JASPAR yes 112080691
chr19 2599579 2599597 ESR1 JASPAR yes 70784214
chr19 2599579 2599597 ESR1 JASPAR yes 112080692
SNP sites on vista28238[chr19:2599036-2599584]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 2599037 rs542601258 C A
HIC2 MAX POLR2A USF2
5386696
chr19 2599042 rs560697870 C T
MAX POLR2A USF2
5386697
chr19 2599063 rs8100700 G A,T
MAX NFATC3 POLR2A USF1 USF2
5386698
chr19 2599065 rs201981385 C T
MAX NFATC2 NFATC3 POLR2A USF1 USF2
5386699
chr19 2599149 rs2965205 C T
MAX POLR2A USF1 USF2
5386700
chr19 2599177 rs189057161 T G
MAX POLR2A USF1 USF2
5386701
chr19 2599187 rs551812247 C T
MAX POLR2A USF1 USF2
5386702
chr19 2599257 rs79382348 A G
MAX POLR2A USF1 USF2
5386703
chr19 2599401 rs2965206 T C
MAX POLR2A REST
5386704
chr19 2599492 rs535140083 G A
POLR2A
5386705
chr19 2599572 rs571715494 T C
POLR2A RUNX2
5386706
Genes possibly regulated by vista28238[chr19:2599036-2599584]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
Back to top
No results
miRNAs possibly regulated by vista28238[chr19:2599036-2599584]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results