EnhancerDB
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  3. vista28240[chr19:2620825-2621136]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28240[chr19:2620825-2621136]
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Tissue distribution of vista28240
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Transcription factor that possibly regulate vista28240[chr19:2620825-2621136]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 2620812 2620831 PAX5 JASPAR yes 70784310
chr19 2620812 2620831 PAX5 JASPAR yes 112084359
chr19 2620829 2620848 REST JASPAR yes 70784311
chr19 2620829 2620848 REST JASPAR yes 112084361
chr19 2620873 2620886 TFAP2A JASPAR yes 70784312
chr19 2620873 2620886 TFAP2B JASPAR yes 70784313
chr19 2620873 2620886 TFAP2C JASPAR yes 70784314
chr19 2620873 2620886 TFAP2A JASPAR yes 112084362
chr19 2620873 2620886 TFAP2B JASPAR yes 112084363
chr19 2620873 2620886 TFAP2C JASPAR yes 112084364
chr19 2620880 2620890 SP1 JASPAR yes 70784315
chr19 2620880 2620890 SP1 JASPAR yes 112084365
chr19 2620884 2620902 ESR1 JASPAR yes 70784316
chr19 2620884 2620902 ESR2 JASPAR yes 70784317
chr19 2620884 2620902 ESR1 JASPAR yes 112084366
chr19 2620884 2620902 ESR2 JASPAR yes 112084367
chr19 2620885 2620900 ESR2 JASPAR yes 70784318
chr19 2620885 2620900 ESR2 JASPAR yes 112084368
chr19 2620890 2620903 NR2F1 JASPAR yes 70784319
chr19 2620890 2620903 NR2F1 JASPAR yes 112084369
chr19 2620892 2620903 ESRRA JASPAR yes 70784320
chr19 2620892 2620903 ESRRB JASPAR yes 70784321
chr19 2620892 2620903 ESRRA JASPAR yes 112084370
chr19 2620892 2620903 ESRRB JASPAR yes 112084371
chr19 2620893 2620901 NR4A2 JASPAR yes 70784322
chr19 2620893 2620901 NR4A2 JASPAR yes 112084372
chr19 2620899 2620909 RELA JASPAR yes 70784323
chr19 2620899 2620909 RELA JASPAR yes 112084373
chr19 2620900 2620911 NFKB1 JASPAR yes 70784324
chr19 2620900 2620911 NFKB1 JASPAR yes 112084374
chr19 2620913 2620934 IRF1 JASPAR yes 70784325
chr19 2620913 2620934 IRF1 JASPAR yes 112084375
chr19 2620917 2620931 IRF8 JASPAR yes 70784326
chr19 2620917 2620931 IRF8 JASPAR yes 112084376
chr19 2620917 2620932 IRF9 JASPAR yes 70784327
chr19 2620917 2620932 IRF9 JASPAR yes 112084377
chr19 2620918 2620936 IRF2 JASPAR yes 70784328
chr19 2620918 2620936 IRF2 JASPAR yes 112084378
chr19 2620921 2620936 PRDM1 JASPAR yes 70784329
chr19 2620921 2620936 PRDM1 JASPAR yes 112084379
chr19 2620928 2620932 YY1 TRANSFAC yes 70784330
chr19 2620928 2620932 YY1 TRANSFAC yes 112084380
chr19 2620932 2620936 TEAD2 TRANSFAC yes 70784331
chr19 2620932 2620936 TEAD2 TRANSFAC yes 112084381
chr19 2620932 2620937 TBP TRANSFAC yes 70784332
chr19 2620932 2620937 TBP TRANSFAC yes 112084382
chr19 2620932 2620938 TFIID TRANSFAC yes 70784333
chr19 2620932 2620938 TFIID TRANSFAC yes 112084383
chr19 2620940 2620954 CREB3 JASPAR yes 70784334
chr19 2620940 2620954 CREB3L1 JASPAR yes 70784335
chr19 2620940 2620954 CREB3 JASPAR yes 112084384
chr19 2620940 2620954 CREB3L1 JASPAR yes 112084385
chr19 2620941 2620955 XBP1 JASPAR yes 70784336
chr19 2620941 2620955 XBP1 JASPAR yes 112084386
chr19 2620943 2620948 ATF1 TRANSFAC yes 70784337
chr19 2620943 2620948 ATF1 TRANSFAC yes 112084387
chr19 2620952 2620963 FLI1 JASPAR yes 70784338
chr19 2620952 2620963 FLI1 JASPAR yes 112084388
chr19 2620954 2620962 EHF JASPAR yes 70784339
chr19 2620954 2620962 EHF JASPAR yes 112084389
chr19 2620980 2620991 FOXH1 JASPAR yes 70784340
chr19 2620980 2620991 FOXH1 JASPAR yes 112084390
chr19 2620984 2621000 T JASPAR yes 70784341
chr19 2620984 2621000 T JASPAR yes 112084391
chr19 2621025 2621030 SP1 TRANSFAC yes 70784342
chr19 2621025 2621030 SP1 TRANSFAC yes 112084392
chr19 2621047 2621052 ETS2 TRANSFAC yes 70784343
chr19 2621047 2621052 ETS2 TRANSFAC yes 112084393
chr19 2621062 2621070 EHF JASPAR yes 70784344
chr19 2621062 2621070 EHF JASPAR yes 112084394
chr19 2621065 2621076 EBF1 JASPAR yes 70784345
chr19 2621065 2621076 EBF1 JASPAR yes 112084395
chr19 2621070 2621080 SREBF1 JASPAR yes 70784346
chr19 2621070 2621080 SREBF2 JASPAR yes 70784347
chr19 2621070 2621080 SREBF1 JASPAR yes 112084396
chr19 2621070 2621080 SREBF2 JASPAR yes 112084397
chr19 2621073 2621088 ESR2 JASPAR yes 70784348
chr19 2621073 2621088 ESR2 JASPAR yes 112084398
chr19 2621075 2621083 NR4A2 JASPAR yes 70784349
chr19 2621075 2621083 NR4A2 JASPAR yes 112084399
chr19 2621084 2621095 FLI1 JASPAR yes 70784350
chr19 2621084 2621095 FLI1 JASPAR yes 112084400
chr19 2621086 2621094 EHF JASPAR yes 70784351
chr19 2621086 2621094 EHF JASPAR yes 112084401
chr19 2621119 2621125 JUN TRANSFAC yes 70784352
chr19 2621119 2621125 JUN TRANSFAC yes 112084402
SNP sites on vista28240[chr19:2620825-2621136]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 2620937 rs554376169 A C
TBP TFIID
5387128
chr19 2620940 rs76604618 G A
CREB3 CREB3L1
5387129
chr19 2621018 rs532265401 T C no 5387130
chr19 2621121 rs557787169 G C
JUN
5387131
Genes possibly regulated by vista28240[chr19:2620825-2621136]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 2511217 2702707 - GNG7 ENSG00000176533.8 2702707 0.78 1.0 16786 18429
Expression level of Genes
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miRNAs possibly regulated by vista28240[chr19:2620825-2621136]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results