EnhancerDB
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  3. vista28244[chr19:2627461-2627884]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28244[chr19:2627461-2627884]
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Tissue distribution of vista28244
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Transcription factor that possibly regulate vista28244[chr19:2627461-2627884]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 2627496 2627840 STAT3 UCSC Txn Factor no Conserved 108363779
chr19 2627529 2627824 FOS UCSC Txn Factor no Conserved 108363792
chr19 2627540 2627846 NR3C1 UCSC Txn Factor no Conserved 108363797
chr19 2627445 2627466 ZNF263 JASPAR yes 70784524
chr19 2627445 2627466 ZNF263 JASPAR yes 112085536
chr19 2627451 2627462 GCM1 JASPAR yes 70784525
chr19 2627451 2627462 GCM1 JASPAR yes 112085541
chr19 2627460 2627481 ZNF263 JASPAR yes 70784526
chr19 2627460 2627481 ZNF263 JASPAR yes 112085543
chr19 2627483 2627503 TP63 JASPAR yes 70784527
chr19 2627483 2627503 TP63 JASPAR yes 112085544
chr19 2627488 2627492 ESR1 TRANSFAC yes 70784528
chr19 2627488 2627492 ESR1 TRANSFAC yes 112085545
chr19 2627489 2627508 PAX5 JASPAR yes 70784529
chr19 2627489 2627508 PAX5 JASPAR yes 112085546
chr19 2627490 2627502 PKNOX1 JASPAR yes 70784530
chr19 2627490 2627502 PKNOX2 JASPAR yes 70784531
chr19 2627490 2627502 TGIF1 JASPAR yes 70784532
chr19 2627490 2627502 TGIF2 JASPAR yes 70784533
chr19 2627490 2627502 PKNOX1 JASPAR yes 112085547
chr19 2627490 2627502 PKNOX2 JASPAR yes 112085548
chr19 2627490 2627502 TGIF1 JASPAR yes 112085549
chr19 2627490 2627502 TGIF2 JASPAR yes 112085550
chr19 2627490 2627503 ZBTB18 JASPAR yes 70784534
chr19 2627490 2627503 ZBTB18 JASPAR yes 112085551
chr19 2627491 2627501 MSC JASPAR yes 70784535
chr19 2627491 2627501 MSC JASPAR yes 112085552
chr19 2627511 2627522 FOXP2 JASPAR yes 70784536
chr19 2627511 2627522 FOXP2 JASPAR yes 112085553
chr19 2627512 2627520 FOXO3 JASPAR yes 70784537
chr19 2627512 2627520 FOXO3 JASPAR yes 112085554
chr19 2627513 2627520 FOXD2 JASPAR yes 70784538
chr19 2627513 2627520 FOXI1 JASPAR yes 70784539
chr19 2627513 2627520 FOXL1 JASPAR yes 70784540
chr19 2627513 2627520 FOXO4 JASPAR yes 70784541
chr19 2627513 2627520 FOXO6 JASPAR yes 70784542
chr19 2627513 2627520 FOXP3 JASPAR yes 70784543
chr19 2627513 2627520 FOXD2 JASPAR yes 112085555
chr19 2627513 2627520 FOXI1 JASPAR yes 112085556
chr19 2627513 2627520 FOXL1 JASPAR yes 112085557
chr19 2627513 2627520 FOXO4 JASPAR yes 112085558
chr19 2627513 2627520 FOXO6 JASPAR yes 112085559
chr19 2627513 2627520 FOXP3 JASPAR yes 112085560
chr19 2627513 2627521 FOXD1 JASPAR yes 70784544
chr19 2627513 2627521 FOXG1 JASPAR yes 70784545
chr19 2627513 2627521 FOXO3 JASPAR yes 70784546
chr19 2627513 2627521 FOXD1 JASPAR yes 112085561
chr19 2627513 2627521 FOXG1 JASPAR yes 112085562
chr19 2627513 2627521 FOXO3 JASPAR yes 112085563
chr19 2627517 2627536 PAX5 JASPAR yes 70784547
chr19 2627517 2627536 PAX5 JASPAR yes 112085564
chr19 2627520 2627537 PAX9 JASPAR yes 70784548
chr19 2627520 2627537 PAX9 JASPAR yes 112085565
chr19 2627526 2627546 ESR1 JASPAR yes 70784549
chr19 2627526 2627546 ESR1 JASPAR yes 112085566
chr19 2627529 2627542 SMAD2 JASPAR yes 70784550
chr19 2627529 2627542 SMAD2 JASPAR yes 112085567
chr19 2627531 2627551 ESR1 JASPAR yes 70784551
chr19 2627531 2627551 ESR1 JASPAR yes 112085568
chr19 2627544 2627558 TLX1 JASPAR yes 70784552
chr19 2627544 2627558 TLX1 JASPAR yes 112085569
chr19 2627552 2627556 NFE TRANSFAC yes 70784553
chr19 2627552 2627556 NFE TRANSFAC yes 112085570
chr19 2627554 2627573 PAX5 JASPAR yes 70784554
chr19 2627554 2627573 PAX5 JASPAR yes 112085571
chr19 2627625 2627629 YY1 TRANSFAC yes 70784555
chr19 2627625 2627629 YY1 TRANSFAC yes 112085572
chr19 2627665 2627680 AR JASPAR yes 70784556
chr19 2627665 2627680 AR JASPAR yes 112085573
chr19 2627665 2627682 NR3C1 JASPAR yes 70784557
chr19 2627665 2627682 NR3C2 JASPAR yes 70784558
chr19 2627665 2627682 NR3C1 JASPAR yes 112085574
chr19 2627665 2627682 NR3C2 JASPAR yes 112085575
chr19 2627678 2627688 TEAD1 JASPAR yes 70784559
chr19 2627678 2627688 TEAD4 JASPAR yes 70784560
chr19 2627678 2627688 TEAD1 JASPAR yes 112085576
chr19 2627678 2627688 TEAD4 JASPAR yes 112085577
chr19 2627678 2627690 TEAD1 JASPAR yes 70784561
chr19 2627678 2627690 TEAD1 JASPAR yes 112085578
chr19 2627679 2627687 TEAD3 JASPAR yes 70784562
chr19 2627679 2627687 TEAD3 JASPAR yes 112085579
chr19 2627716 2627730 JUN JASPAR yes 70784563
chr19 2627716 2627730 JUN JASPAR yes 112085580
chr19 2627719 2627730 JUNB JASPAR yes 70784564
chr19 2627719 2627730 JUNB JASPAR yes 112085581
chr19 2627720 2627731 FOS JASPAR yes 70784565
chr19 2627720 2627731 FOSL1 JASPAR yes 70784566
chr19 2627720 2627731 JUND JASPAR yes 70784567
chr19 2627720 2627731 FOS JASPAR yes 112085582
chr19 2627720 2627731 FOSL1 JASPAR yes 112085583
chr19 2627720 2627731 JUND JASPAR yes 112085584
chr19 2627721 2627732 FOSL2 JASPAR yes 70784568
chr19 2627721 2627732 JUNB JASPAR yes 70784569
chr19 2627721 2627732 NFE2L2 JASPAR yes 70784570
chr19 2627721 2627732 FOSL2 JASPAR yes 112085585
chr19 2627721 2627732 JUNB JASPAR yes 112085586
chr19 2627721 2627732 NFE2L2 JASPAR yes 112085587
chr19 2627721 2627735 JUN JASPAR yes 70784571
chr19 2627721 2627735 JUN JASPAR yes 112085588
chr19 2627722 2627733 BATF JASPAR yes 70784572
chr19 2627722 2627733 BATF JASPAR yes 112085589
chr19 2627740 2627758 MAFF JASPAR yes 70784573
chr19 2627740 2627758 MAFF JASPAR yes 112085590
chr19 2627742 2627753 NRL JASPAR yes 70784574
chr19 2627742 2627753 NRL JASPAR yes 112085591
chr19 2627742 2627757 MAFK JASPAR yes 70784575
chr19 2627742 2627757 MAFK JASPAR yes 112085592
chr19 2627779 2627792 HSF1 JASPAR yes 70784576
chr19 2627779 2627792 HSF2 JASPAR yes 70784577
chr19 2627779 2627792 HSF4 JASPAR yes 70784578
chr19 2627779 2627792 HSF1 JASPAR yes 112085593
chr19 2627779 2627792 HSF2 JASPAR yes 112085594
chr19 2627779 2627792 HSF4 JASPAR yes 112085595
chr19 2627786 2627791 H4TF1 TRANSFAC yes 70784579
chr19 2627786 2627791 H4TF1 TRANSFAC yes 112085596
chr19 2627815 2627819 H4TF2 TRANSFAC yes 70784580
chr19 2627815 2627819 H4TF2 TRANSFAC yes 112085597
chr19 2627835 2627844 ZEB1 JASPAR yes 70784581
chr19 2627835 2627844 ZEB1 JASPAR yes 112085598
chr19 2627838 2627843 USF2 TRANSFAC yes 70784582
chr19 2627838 2627843 USF2 TRANSFAC yes 112085599
chr19 2627849 2627862 NR2F1 JASPAR yes 70784583
chr19 2627849 2627862 NR2F1 JASPAR yes 112085600
chr19 2627852 2627869 RARA JASPAR yes 70784584
chr19 2627852 2627869 RARA JASPAR yes 112085601
chr19 2627853 2627857 ESR1 TRANSFAC yes 70784585
chr19 2627853 2627857 ESR1 TRANSFAC yes 112085602
chr19 2627853 2627864 USF1 JASPAR yes 70784586
chr19 2627853 2627864 USF1 JASPAR yes 112085603
chr19 2627854 2627864 SREBF1 JASPAR yes 70784587
chr19 2627854 2627864 SREBF2 JASPAR yes 70784588
chr19 2627854 2627864 SREBF1 JASPAR yes 112085604
chr19 2627854 2627864 SREBF2 JASPAR yes 112085605
chr19 2627856 2627865 ZEB1 JASPAR yes 70784589
chr19 2627856 2627865 ZEB1 JASPAR yes 112085606
chr19 2627868 2627872 H4TF2 TRANSFAC yes 70784590
chr19 2627868 2627872 H4TF2 TRANSFAC yes 112085607
SNP sites on vista28244[chr19:2627461-2627884]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 2627519 rs147138137 C T
FOXD1 FOXD2 FOXG1 FOXI1 FOXL1 FOXO3 FOXO4 FOXO6 FOXP2 FOXP3 PAX5 STAT3
5387235
chr19 2627524 rs111479860 A G
PAX5 PAX9 STAT3
5387236
chr19 2627561 rs74631976 C T
FOS NR3C1 PAX5 STAT3
5387237
chr19 2627585 rs140308402 C T
FOS NR3C1 STAT3
5387238
chr19 2627635 rs12462730 C T
FOS NR3C1 STAT3
5387239
Genes possibly regulated by vista28244[chr19:2627461-2627884]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 2511217 2702707 - GNG7 ENSG00000176533.8 2702707 0.78 1.0 16786 25177
chr19 2714565 2721416 - DIRAS1 ENSG00000176490.4 2721416 0.95 1.0 16787 6468
Expression level of Genes
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miRNAs possibly regulated by vista28244[chr19:2627461-2627884]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results