EnhancerDB
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  3. vista28246[chr19:2629688-2630134]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28246[chr19:2629688-2630134]
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Tissue distribution of vista28246
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Transcription factor that possibly regulate vista28246[chr19:2629688-2630134]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 2629683 2629694 GCM1 JASPAR yes 70784633
chr19 2629683 2629694 GCM1 JASPAR yes 112085872
chr19 2629684 2629694 GCM2 JASPAR yes 70784634
chr19 2629684 2629694 GCM2 JASPAR yes 112085873
chr19 2629694 2629709 HNF4G JASPAR yes 70784635
chr19 2629694 2629709 HNF4G JASPAR yes 112085874
chr19 2629695 2629710 HNF4A JASPAR yes 70784636
chr19 2629695 2629710 HNF4A JASPAR yes 112085875
chr19 2629697 2629701 ESR1 TRANSFAC yes 70784637
chr19 2629697 2629701 ESR1 TRANSFAC yes 112085876
chr19 2629706 2629726 RREB1 JASPAR yes 70784638
chr19 2629706 2629726 RREB1 JASPAR yes 112085877
chr19 2629707 2629727 RREB1 JASPAR yes 70784639
chr19 2629707 2629727 RREB1 JASPAR yes 112085878
chr19 2629714 2629720 TCF4 TRANSFAC yes 70784640
chr19 2629714 2629720 TCF4 TRANSFAC yes 112085879
chr19 2629714 2629726 FOXI1 JASPAR yes 70784641
chr19 2629714 2629726 FOXI1 JASPAR yes 112085880
chr19 2629727 2629738 E2F4 JASPAR yes 70784642
chr19 2629727 2629738 E2F6 JASPAR yes 70784643
chr19 2629727 2629738 E2F4 JASPAR yes 112085881
chr19 2629727 2629738 E2F6 JASPAR yes 112085882
chr19 2629732 2629749 RXRA JASPAR yes 70784644
chr19 2629732 2629749 RXRA JASPAR yes 112085883
chr19 2629736 2629750 RXRB JASPAR yes 70784645
chr19 2629736 2629750 RXRB JASPAR yes 112085884
chr19 2629736 2629751 NR2C2 JASPAR yes 70784646
chr19 2629736 2629751 NR2C2 JASPAR yes 112085885
chr19 2629739 2629752 NR2F1 JASPAR yes 70784647
chr19 2629739 2629752 NR2F1 JASPAR yes 112085886
chr19 2629743 2629755 INSM1 JASPAR yes 70784648
chr19 2629743 2629755 INSM1 JASPAR yes 112085887
chr19 2629750 2629759 HIC2 JASPAR yes 70784649
chr19 2629750 2629759 HIC2 JASPAR yes 112085888
chr19 2629779 2629783 YY1 TRANSFAC yes 70784650
chr19 2629779 2629783 YY1 TRANSFAC yes 112085889
chr19 2629787 2629796 NKX3-2 JASPAR yes 70784651
chr19 2629787 2629796 NKX3-2 JASPAR yes 112085890
chr19 2629788 2629796 ISL2 JASPAR yes 70784652
chr19 2629788 2629796 ISL2 JASPAR yes 112085891
chr19 2629788 2629803 AR JASPAR yes 70784653
chr19 2629788 2629803 AR JASPAR yes 112085892
chr19 2629806 2629820 FOXF2 JASPAR yes 70784654
chr19 2629806 2629820 FOXF2 JASPAR yes 112085893
chr19 2629808 2629818 HOXA13 JASPAR yes 70784655
chr19 2629808 2629818 HOXB13 JASPAR yes 70784656
chr19 2629808 2629818 HOXD13 JASPAR yes 70784657
chr19 2629808 2629818 HOXA13 JASPAR yes 112085894
chr19 2629808 2629818 HOXB13 JASPAR yes 112085895
chr19 2629808 2629818 HOXD13 JASPAR yes 112085896
chr19 2629809 2629819 MEF2A JASPAR yes 70784658
chr19 2629809 2629819 MEF2A JASPAR yes 112085897
chr19 2629820 2629841 MAFG JASPAR yes 70784659
chr19 2629820 2629841 MAFG JASPAR yes 112085898
chr19 2629848 2629852 LFA1 TRANSFAC yes 70784660
chr19 2629848 2629852 LFA1 TRANSFAC yes 112085899
chr19 2629880 2629884 H4TF2 TRANSFAC yes 70784661
chr19 2629880 2629884 H4TF2 TRANSFAC yes 112085900
chr19 2629883 2629894 ELK4 JASPAR yes 70784662
chr19 2629883 2629894 FLI1 JASPAR yes 70784663
chr19 2629883 2629894 ELK4 JASPAR yes 112085901
chr19 2629883 2629894 FLI1 JASPAR yes 112085902
chr19 2629883 2629896 ELF3 JASPAR yes 70784664
chr19 2629883 2629896 ELF3 JASPAR yes 112085903
chr19 2629884 2629888 YY1 TRANSFAC yes 70784665
chr19 2629884 2629888 YY1 TRANSFAC yes 112085904
chr19 2629884 2629895 ELF5 JASPAR yes 70784666
chr19 2629884 2629895 ELF5 JASPAR yes 112085905
chr19 2629884 2629896 EHF JASPAR yes 70784667
chr19 2629884 2629896 ELF1 JASPAR yes 70784668
chr19 2629884 2629896 ELF4 JASPAR yes 70784669
chr19 2629884 2629896 EHF JASPAR yes 112085906
chr19 2629884 2629896 ELF1 JASPAR yes 112085907
chr19 2629884 2629896 ELF4 JASPAR yes 112085908
chr19 2629884 2629897 ELF1 JASPAR yes 70784670
chr19 2629884 2629897 ELF1 JASPAR yes 112085909
chr19 2629885 2629893 FEV JASPAR yes 70784671
chr19 2629885 2629893 FEV JASPAR yes 112085910
chr19 2629894 2629910 ZNF143 JASPAR yes 70784672
chr19 2629894 2629910 ZNF143 JASPAR yes 112085911
chr19 2629899 2629910 RUNX1 JASPAR yes 70784673
chr19 2629899 2629910 RUNX1 JASPAR yes 112085912
chr19 2629904 2629915 NFIL3 JASPAR yes 70784674
chr19 2629904 2629915 NFIL3 JASPAR yes 112085913
chr19 2629905 2629917 DBP JASPAR yes 70784675
chr19 2629905 2629917 HLF JASPAR yes 70784676
chr19 2629905 2629917 JDP2 JASPAR yes 70784677
chr19 2629905 2629917 TEF JASPAR yes 70784678
chr19 2629905 2629917 DBP JASPAR yes 112085914
chr19 2629905 2629917 HLF JASPAR yes 112085915
chr19 2629905 2629917 JDP2 JASPAR yes 112085916
chr19 2629905 2629917 TEF JASPAR yes 112085917
chr19 2629906 2629916 CEBPB JASPAR yes 70784679
chr19 2629906 2629916 CEBPD JASPAR yes 70784680
chr19 2629906 2629916 CEBPE JASPAR yes 70784681
chr19 2629906 2629916 CEBPG JASPAR yes 70784682
chr19 2629906 2629916 CEBPB JASPAR yes 112085918
chr19 2629906 2629916 CEBPD JASPAR yes 112085919
chr19 2629906 2629916 CEBPE JASPAR yes 112085920
chr19 2629906 2629916 CEBPG JASPAR yes 112085921
chr19 2629907 2629915 GMEB2 JASPAR yes 70784683
chr19 2629907 2629915 GMEB2 JASPAR yes 112085922
chr19 2629907 2629918 NFIL3 JASPAR yes 70784684
chr19 2629907 2629918 NFIL3 JASPAR yes 112085923
chr19 2629911 2629925 BATF3 JASPAR yes 70784685
chr19 2629911 2629925 BATF3 JASPAR yes 112085924
chr19 2629919 2629938 CTCF JASPAR yes 70784686
chr19 2629919 2629938 CTCF JASPAR yes 112085925
chr19 2629978 2629989 FLI1 JASPAR yes 70784687
chr19 2629978 2629989 FLI1 JASPAR yes 112085926
chr19 2629979 2629989 ETV6 JASPAR yes 70784688
chr19 2629979 2629989 ETV6 JASPAR yes 112085927
chr19 2629980 2629987 SPI1 JASPAR yes 70784689
chr19 2629980 2629987 SPI1 JASPAR yes 112085928
chr19 2629980 2629988 EHF JASPAR yes 70784690
chr19 2629980 2629988 EHF JASPAR yes 112085929
chr19 2629982 2629989 SPIB JASPAR yes 70784691
chr19 2629982 2629989 SPIB JASPAR yes 112085930
chr19 2630000 2630005 H4TF1 TRANSFAC yes 70784692
chr19 2630000 2630005 H4TF1 TRANSFAC yes 112085931
chr19 2630000 2630011 CEBPB JASPAR yes 70784693
chr19 2630000 2630011 CEBPB JASPAR yes 112085932
chr19 2630000 2630015 MEF2C JASPAR yes 70784694
chr19 2630000 2630015 MEF2C JASPAR yes 112085933
chr19 2630001 2630012 CEBPA JASPAR yes 70784695
chr19 2630001 2630012 CEBPA JASPAR yes 112085934
chr19 2630014 2630029 FOXP1 JASPAR yes 70784696
chr19 2630014 2630029 FOXP1 JASPAR yes 112085935
chr19 2630016 2630031 FOXP1 JASPAR yes 70784697
chr19 2630016 2630031 FOXP1 JASPAR yes 112085936
chr19 2630019 2630034 FOXP1 JASPAR yes 70784698
chr19 2630019 2630034 FOXP1 JASPAR yes 112085937
chr19 2630032 2630041 NKX3-2 JASPAR yes 70784699
chr19 2630032 2630041 NKX3-2 JASPAR yes 112085938
chr19 2630040 2630060 TBX19 JASPAR yes 70784700
chr19 2630040 2630060 TBX19 JASPAR yes 112085939
chr19 2630042 2630058 T JASPAR yes 70784701
chr19 2630042 2630058 T JASPAR yes 112085940
chr19 2630045 2630049 YY1 TRANSFAC yes 70784702
chr19 2630045 2630049 YY1 TRANSFAC yes 112085941
chr19 2630055 2630058 MYB TRANSFAC yes 70784703
chr19 2630055 2630058 MYB TRANSFAC yes 112085942
chr19 2630066 2630079 SMAD2 JASPAR yes 70784704
chr19 2630066 2630079 SMAD2 JASPAR yes 112085943
chr19 2630068 2630087 CTCF JASPAR yes 70784705
chr19 2630068 2630087 CTCF JASPAR yes 112085944
chr19 2630099 2630119 RREB1 JASPAR yes 70784706
chr19 2630099 2630119 RREB1 JASPAR yes 112085945
chr19 2630102 2630106 H1TF2 TRANSFAC yes 70784707
chr19 2630102 2630106 NFE TRANSFAC yes 70784708
chr19 2630102 2630106 SRF TRANSFAC yes 70784709
chr19 2630102 2630106 H1TF2 TRANSFAC yes 112085946
chr19 2630102 2630106 NFE TRANSFAC yes 112085947
chr19 2630102 2630106 SRF TRANSFAC yes 112085948
chr19 2630106 2630109 MYB TRANSFAC yes 70784710
chr19 2630106 2630109 MYB TRANSFAC yes 112085949
chr19 2630106 2630121 NR2C2 JASPAR yes 70784711
chr19 2630106 2630121 NR2C2 JASPAR yes 112085950
chr19 2630109 2630129 RREB1 JASPAR yes 70784712
chr19 2630109 2630129 RREB1 JASPAR yes 112085951
chr19 2630116 2630128 E2F8 JASPAR yes 70784713
chr19 2630116 2630128 E2F8 JASPAR yes 112085952
chr19 2630120 2630126 MZF1 JASPAR yes 70784714
chr19 2630120 2630126 MZF1 JASPAR yes 112085953
SNP sites on vista28246[chr19:2629688-2630134]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 2629845 rs8101536 G A no 5387276
chr19 2629854 rs116196688 C G no 5387277
chr19 2629901 rs150728471 A G
RUNX1 ZNF143
5387278
chr19 2629912 rs61358815 G A
BATF3 CEBPB CEBPD CEBPE CEBPG DBP GMEB2 HLF JDP2 NFIL3 TEF
5387279
chr19 2629927 rs80316204 T C,G
CTCF
5387280
chr19 2629981 rs564596799 A G
EHF ETV6 FLI1 SPI1
5387281
chr19 2630006 rs146350123 C T
CEBPA CEBPB MEF2C
5387282
chr19 2630019 rs73919820 G T
FOXP1
5387283
Genes possibly regulated by vista28246[chr19:2629688-2630134]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 2511217 2702707 - GNG7 ENSG00000176533.8 2702707 0.78 1.0 16786 27427
chr19 2714565 2721416 - DIRAS1 ENSG00000176490.4 2721416 0.95 1.0 16787 8718
Expression level of Genes
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miRNAs possibly regulated by vista28246[chr19:2629688-2630134]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results