EnhancerDB
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  3. vista28247[chr19:2664236-2664533]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28247[chr19:2664236-2664533]
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Tissue distribution of vista28247
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Transcription factor that possibly regulate vista28247[chr19:2664236-2664533]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 2664227 2664242 STAT2 JASPAR yes 70784715
chr19 2664227 2664242 STAT2 JASPAR yes 112090007
chr19 2664235 2664241 HiNF-A TRANSFAC yes 70784716
chr19 2664235 2664241 HiNF-A TRANSFAC yes 112090008
chr19 2664241 2664262 REST JASPAR yes 70784717
chr19 2664241 2664262 REST JASPAR yes 112090009
chr19 2664245 2664249 NFE TRANSFAC yes 70784718
chr19 2664245 2664249 NFE TRANSFAC yes 112090010
chr19 2664250 2664256 SOX10 JASPAR yes 70784719
chr19 2664250 2664256 SOX10 JASPAR yes 112090011
chr19 2664256 2664262 YY1 JASPAR yes 70784720
chr19 2664256 2664262 YY1 JASPAR yes 112090012
chr19 2664285 2664296 BATF JASPAR yes 70784721
chr19 2664285 2664296 BATF JASPAR yes 112090013
chr19 2664290 2664306 RFX2 JASPAR yes 70784722
chr19 2664290 2664306 RFX3 JASPAR yes 70784723
chr19 2664290 2664306 RFX4 JASPAR yes 70784724
chr19 2664290 2664306 RFX5 JASPAR yes 70784725
chr19 2664290 2664306 RFX2 JASPAR yes 112090014
chr19 2664290 2664306 RFX3 JASPAR yes 112090015
chr19 2664290 2664306 RFX4 JASPAR yes 112090016
chr19 2664290 2664306 RFX5 JASPAR yes 112090017
chr19 2664291 2664306 RUNX2 JASPAR yes 70784726
chr19 2664291 2664306 RUNX2 JASPAR yes 112090018
chr19 2664291 2664310 RFX2 JASPAR yes 70784727
chr19 2664291 2664310 RFX2 JASPAR yes 112090019
chr19 2664293 2664308 RFX5 JASPAR yes 70784728
chr19 2664293 2664308 RFX5 JASPAR yes 112090020
chr19 2664306 2664318 FOXI1 JASPAR yes 70784729
chr19 2664306 2664318 FOXI1 JASPAR yes 112090021
chr19 2664325 2664336 NRL JASPAR yes 70784730
chr19 2664325 2664336 NRL JASPAR yes 112090022
chr19 2664325 2664340 MAFK JASPAR yes 70784731
chr19 2664325 2664340 MAFK JASPAR yes 112090023
chr19 2664328 2664342 MTF1 JASPAR yes 70784732
chr19 2664328 2664342 MTF1 JASPAR yes 112090024
chr19 2664336 2664342 TCF4 TRANSFAC yes 70784733
chr19 2664336 2664342 TCF4 TRANSFAC yes 112090025
chr19 2664339 2664350 FLI1 JASPAR yes 70784734
chr19 2664339 2664350 FLI1 JASPAR yes 112090026
chr19 2664339 2664360 ZNF263 JASPAR yes 70784735
chr19 2664339 2664360 ZNF263 JASPAR yes 112090027
chr19 2664340 2664345 ETS2 TRANSFAC yes 70784736
chr19 2664340 2664345 ETS2 TRANSFAC yes 112090028
chr19 2664340 2664348 EHF JASPAR yes 70784737
chr19 2664340 2664348 EHF JASPAR yes 112090029
chr19 2664341 2664353 INSM1 JASPAR yes 70784738
chr19 2664341 2664353 INSM1 JASPAR yes 112090030
chr19 2664347 2664362 ESR2 JASPAR yes 70784739
chr19 2664347 2664362 ESR2 JASPAR yes 112090031
chr19 2664347 2664367 ESR1 JASPAR yes 70784740
chr19 2664347 2664367 ESR1 JASPAR yes 112090032
chr19 2664348 2664352 LFA1 TRANSFAC yes 70784741
chr19 2664348 2664352 LFA1 TRANSFAC yes 112090033
chr19 2664365 2664378 SMAD2 JASPAR yes 70784742
chr19 2664365 2664378 SMAD2 JASPAR yes 112090034
chr19 2664367 2664388 REST JASPAR yes 70784743
chr19 2664367 2664388 REST JASPAR yes 112090035
chr19 2664370 2664386 T JASPAR yes 70784744
chr19 2664370 2664386 T JASPAR yes 112090036
chr19 2664375 2664385 ID4 JASPAR yes 70784745
chr19 2664375 2664385 TCF3 JASPAR yes 70784746
chr19 2664375 2664385 TCF4 JASPAR yes 70784747
chr19 2664375 2664385 ID4 JASPAR yes 112090037
chr19 2664375 2664385 TCF3 JASPAR yes 112090038
chr19 2664375 2664385 TCF4 JASPAR yes 112090039
chr19 2664379 2664396 RXRA JASPAR yes 70784748
chr19 2664379 2664396 RXRA JASPAR yes 112090040
chr19 2664393 2664414 ZNF263 JASPAR yes 70784749
chr19 2664393 2664414 ZNF263 JASPAR yes 112090041
chr19 2664410 2664422 CREB1 JASPAR yes 70784750
chr19 2664410 2664422 CREB1 JASPAR yes 112090042
chr19 2664412 2664426 CREB3 JASPAR yes 70784751
chr19 2664412 2664426 CREB3L1 JASPAR yes 70784752
chr19 2664412 2664426 CREB3 JASPAR yes 112090043
chr19 2664412 2664426 CREB3L1 JASPAR yes 112090044
chr19 2664413 2664427 XBP1 JASPAR yes 70784753
chr19 2664413 2664427 XBP1 JASPAR yes 112090045
chr19 2664415 2664420 ATF1 TRANSFAC yes 70784754
chr19 2664415 2664420 ATF1 TRANSFAC yes 112090046
chr19 2664449 2664468 PAX5 JASPAR yes 70784755
chr19 2664449 2664468 PAX5 JASPAR yes 112090047
chr19 2664452 2664469 PAX1 JASPAR yes 70784756
chr19 2664452 2664469 PAX9 JASPAR yes 70784757
chr19 2664452 2664469 PAX1 JASPAR yes 112090048
chr19 2664452 2664469 PAX9 JASPAR yes 112090049
chr19 2664464 2664474 RORA JASPAR yes 70784758
chr19 2664464 2664474 RORA JASPAR yes 112090050
chr19 2664486 2664498 TFAP2A JASPAR yes 70784759
chr19 2664486 2664498 TFAP2B JASPAR yes 70784760
chr19 2664486 2664498 TFAP2C JASPAR yes 70784761
chr19 2664486 2664498 TFAP2A JASPAR yes 112090051
chr19 2664486 2664498 TFAP2B JASPAR yes 112090052
chr19 2664486 2664498 TFAP2C JASPAR yes 112090053
chr19 2664486 2664501 TFAP2C JASPAR yes 70784762
chr19 2664486 2664501 TFAP2C JASPAR yes 112090054
chr19 2664487 2664498 TFAP2A JASPAR yes 70784763
chr19 2664487 2664498 TFAP2A JASPAR yes 112090055
chr19 2664488 2664497 TFAP2A JASPAR yes 70784764
chr19 2664488 2664497 TFAP2A JASPAR yes 112090056
chr19 2664493 2664497 LFA1 TRANSFAC yes 70784765
chr19 2664493 2664497 LFA1 TRANSFAC yes 112090057
chr19 2664499 2664513 TCF7L2 JASPAR yes 70784766
chr19 2664499 2664513 TCF7L2 JASPAR yes 112090058
chr19 2664499 2664514 LEF1 JASPAR yes 70784767
chr19 2664499 2664514 LEF1 JASPAR yes 112090059
chr19 2664504 2664510 SOX10 JASPAR yes 70784768
chr19 2664504 2664510 SOX10 JASPAR yes 112090060
chr19 2664509 2664529 ESR1 JASPAR yes 70784769
chr19 2664509 2664529 ESR1 JASPAR yes 112090061
chr19 2664510 2664514 LFA1 TRANSFAC yes 70784770
chr19 2664510 2664514 LFA1 TRANSFAC yes 112090062
chr19 2664513 2664531 ESR1 JASPAR yes 70784771
chr19 2664513 2664531 ESR2 JASPAR yes 70784772
chr19 2664513 2664531 ESR1 JASPAR yes 112090063
chr19 2664513 2664531 ESR2 JASPAR yes 112090064
chr19 2664514 2664529 ESR2 JASPAR yes 70784773
chr19 2664514 2664529 ESR2 JASPAR yes 112090065
chr19 2664521 2664532 ESRRB JASPAR yes 70784774
chr19 2664521 2664532 ESRRB JASPAR yes 112090066
chr19 2664524 2664539 TFAP2C JASPAR yes 70784775
chr19 2664524 2664539 TFAP2C JASPAR yes 112090067
SNP sites on vista28247[chr19:2664236-2664533]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 2664358 rs115330945 G A
ESR1 ESR2 ZNF263
5387688
chr19 2664366 rs191580323 C T
ESR1 SMAD2
5387689
chr19 2664402 rs557703494 C T
ZNF263
5387690
Genes possibly regulated by vista28247[chr19:2664236-2664533]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 2511217 2702707 - GNG7 ENSG00000176533.8 2702707 0.78 1.0 16786 61826
chr19 2714565 2721416 - DIRAS1 ENSG00000176490.4 2721416 0.95 1.0 16787 43117
chr19 2717767 2740046 - AC006538.4 ENSG00000267001.1 2740046 0.91 0.82 16788 24487
chr19 2732202 2740150 - SLC39A3 ENSG00000141873.6 2740150 0.77 0.99 16789 24383
Expression level of Genes
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miRNAs possibly regulated by vista28247[chr19:2664236-2664533]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results