EnhancerDB
  1. Home
  2. Enhancers
  3. vista28248[chr19:2668275-2668465]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28248[chr19:2668275-2668465]
Back to top
Tissue distribution of vista28248
Back to top
Transcription factor that possibly regulate vista28248[chr19:2668275-2668465]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 2668298 2668495 POU2F2 UCSC Txn Factor no Conserved 108363947
chr19 2668300 2668317 RARA JASPAR yes 70784776
chr19 2668300 2668317 RARA JASPAR yes 112090624
chr19 2668301 2668316 AR JASPAR yes 70784777
chr19 2668301 2668316 AR JASPAR yes 112090625
chr19 2668301 2668318 NR3C1 JASPAR yes 70784778
chr19 2668301 2668318 NR3C2 JASPAR yes 70784779
chr19 2668301 2668318 NR3C1 JASPAR yes 112090626
chr19 2668301 2668318 NR3C2 JASPAR yes 112090627
chr19 2668301 2668319 NR3C1 JASPAR yes 70784780
chr19 2668301 2668319 NR3C1 JASPAR yes 112090628
chr19 2668306 2668310 YY1 TRANSFAC yes 70784781
chr19 2668306 2668310 YY1 TRANSFAC yes 112090629
chr19 2668318 2668329 GCM1 JASPAR yes 70784782
chr19 2668318 2668329 GCM1 JASPAR yes 112090630
chr19 2668331 2668341 POU6F2 JASPAR yes 70784783
chr19 2668331 2668341 POU6F2 JASPAR yes 112090631
chr19 2668334 2668344 SREBF2 JASPAR yes 70784784
chr19 2668334 2668344 SREBF2 JASPAR yes 112090632
chr19 2668340 2668351 NFIL3 JASPAR yes 70784785
chr19 2668340 2668351 NFIL3 JASPAR yes 112090633
chr19 2668341 2668353 DBP JASPAR yes 70784786
chr19 2668341 2668353 HLF JASPAR yes 70784787
chr19 2668341 2668353 DBP JASPAR yes 112090634
chr19 2668341 2668353 HLF JASPAR yes 112090635
chr19 2668342 2668354 POU2F1 JASPAR yes 70784788
chr19 2668342 2668354 POU2F1 JASPAR yes 112090636
chr19 2668343 2668356 POU2F2 JASPAR yes 70784789
chr19 2668343 2668356 POU2F2 JASPAR yes 112090637
chr19 2668344 2668352 FOXL1 JASPAR yes 70784790
chr19 2668344 2668352 FOXL1 JASPAR yes 112090638
chr19 2668344 2668353 POU5F1B JASPAR yes 70784791
chr19 2668344 2668353 POU5F1B JASPAR yes 112090639
chr19 2668347 2668364 BCL6B JASPAR yes 70784792
chr19 2668347 2668364 BCL6B JASPAR yes 112090640
chr19 2668379 2668384 GATA2 JASPAR yes 70784793
chr19 2668379 2668384 GATA2 JASPAR yes 112090641
chr19 2668380 2668392 POU2F1 JASPAR yes 70784794
chr19 2668380 2668392 POU2F1 JASPAR yes 112090642
chr19 2668380 2668393 POU3F3 JASPAR yes 70784795
chr19 2668380 2668393 POU3F3 JASPAR yes 112090643
chr19 2668380 2668394 POU1F1 JASPAR yes 70784796
chr19 2668380 2668394 POU1F1 JASPAR yes 112090644
chr19 2668381 2668393 POU3F1 JASPAR yes 70784797
chr19 2668381 2668393 POU3F2 JASPAR yes 70784798
chr19 2668381 2668393 POU3F1 JASPAR yes 112090645
chr19 2668381 2668393 POU3F2 JASPAR yes 112090646
chr19 2668381 2668394 POU2F2 JASPAR yes 70784799
chr19 2668381 2668394 POU2F2 JASPAR yes 112090647
chr19 2668382 2668390 POU2F1 TRANSFAC yes 70784800
chr19 2668382 2668390 POU2F1 TRANSFAC yes 112090648
chr19 2668382 2668391 POU3F4 JASPAR yes 70784801
chr19 2668382 2668391 POU5F1B JASPAR yes 70784802
chr19 2668382 2668391 POU3F4 JASPAR yes 112090649
chr19 2668382 2668391 POU5F1B JASPAR yes 112090650
chr19 2668383 2668390 POU2F1 TRANSFAC yes 70784803
chr19 2668383 2668390 POU2F2 TRANSFAC yes 70784804
chr19 2668383 2668390 POU2F1 TRANSFAC yes 112090651
chr19 2668383 2668390 POU2F2 TRANSFAC yes 112090652
chr19 2668390 2668396 NFIC JASPAR yes 70784805
chr19 2668390 2668396 NFIC JASPAR yes 112090653
chr19 2668416 2668437 ZNF263 JASPAR yes 70784806
chr19 2668416 2668437 ZNF263 JASPAR yes 112090654
chr19 2668421 2668431 SP1 JASPAR yes 70784807
chr19 2668421 2668431 SP1 JASPAR yes 112090655
chr19 2668423 2668429 MAZ TRANSFAC yes 70784808
chr19 2668423 2668429 MAZ TRANSFAC yes 112090656
chr19 2668429 2668434 SP1 TRANSFAC yes 70784809
chr19 2668429 2668434 SP1 TRANSFAC yes 112090657
chr19 2668439 2668454 RFX5 JASPAR yes 70784810
chr19 2668439 2668454 RFX5 JASPAR yes 112090658
chr19 2668448 2668453 SP1 TRANSFAC yes 70784811
chr19 2668448 2668453 SP1 TRANSFAC yes 112090659
SNP sites on vista28248[chr19:2668275-2668465]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 2668298 rs561229814 T C
POU2F2
5387752
chr19 2668386 rs149207580 G T
POU1F1 POU2F1 POU2F2 POU3F1 POU3F2 POU3F3 POU3F4 POU5F1B
5387753
Genes possibly regulated by vista28248[chr19:2668275-2668465]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 2511217 2702707 - GNG7 ENSG00000176533.8 2702707 0.78 1.0 16786 65758
chr19 2714565 2721416 - DIRAS1 ENSG00000176490.4 2721416 0.95 1.0 16787 47049
chr19 2717767 2740046 - AC006538.4 ENSG00000267001.1 2740046 0.91 0.82 16788 28419
chr19 2732202 2740150 - SLC39A3 ENSG00000141873.6 2740150 0.77 0.99 16789 28315
Expression level of Genes
Back to top
miRNAs possibly regulated by vista28248[chr19:2668275-2668465]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results