EnhancerDB
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  3. vista28257[chr19:2775094-2775492]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28257[chr19:2775094-2775492]
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Tissue distribution of vista28257
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Transcription factor that possibly regulate vista28257[chr19:2775094-2775492]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 2775118 2775135 RARA JASPAR yes 70785175
chr19 2775118 2775135 RXRA JASPAR yes 70785176
chr19 2775118 2775135 RARA JASPAR yes 112097299
chr19 2775118 2775135 RXRA JASPAR yes 112097300
chr19 2775119 2775124 MYC TRANSFAC yes 70785177
chr19 2775119 2775124 MYC TRANSFAC yes 112097301
chr19 2775125 2775138 NR2F1 JASPAR yes 70785178
chr19 2775125 2775138 NR2F1 JASPAR yes 112097302
chr19 2775127 2775138 ESRRA JASPAR yes 70785179
chr19 2775127 2775138 ESRRA JASPAR yes 112097303
chr19 2775154 2775173 REST JASPAR yes 70785180
chr19 2775154 2775173 REST JASPAR yes 112097304
chr19 2775161 2775166 TFAP2A TRANSFAC yes 70785181
chr19 2775161 2775166 TFAP2A TRANSFAC yes 112097305
chr19 2775161 2775167 MZF1 JASPAR yes 70785182
chr19 2775161 2775167 MZF1 JASPAR yes 112097306
chr19 2775180 2775191 ESRRB JASPAR yes 70785183
chr19 2775180 2775191 ESRRB JASPAR yes 112097307
chr19 2775193 2775204 TFAP2C JASPAR yes 70785184
chr19 2775193 2775204 TFAP2C JASPAR yes 112097308
chr19 2775215 2775234 REST JASPAR yes 70785185
chr19 2775215 2775234 REST JASPAR yes 112097309
chr19 2775235 2775241 NFE2 TRANSFAC yes 70785186
chr19 2775235 2775241 NFE2 TRANSFAC yes 112097310
chr19 2775238 2775258 RREB1 JASPAR yes 70785187
chr19 2775238 2775258 RREB1 JASPAR yes 112097311
chr19 2775248 2775262 TCF7L2 JASPAR yes 70785188
chr19 2775248 2775262 TCF7L2 JASPAR yes 112097312
chr19 2775248 2775263 LEF1 JASPAR yes 70785189
chr19 2775248 2775263 LEF1 JASPAR yes 112097313
chr19 2775295 2775305 SREBF2 JASPAR yes 70785190
chr19 2775295 2775305 SREBF2 JASPAR yes 112097314
chr19 2775312 2775324 INSM1 JASPAR yes 70785191
chr19 2775312 2775324 INSM1 JASPAR yes 112097315
chr19 2775328 2775348 ESR1 JASPAR yes 70785192
chr19 2775328 2775348 ESR1 JASPAR yes 112097316
chr19 2775332 2775350 ESR1 JASPAR yes 70785193
chr19 2775332 2775350 ESR1 JASPAR yes 112097317
chr19 2775350 2775353 MYB TRANSFAC yes 70785194
chr19 2775350 2775353 MYB TRANSFAC yes 112097318
chr19 2775404 2775416 CREB1 JASPAR yes 70785195
chr19 2775404 2775416 CREB1 JASPAR yes 112097319
chr19 2775406 2775420 ATF7 JASPAR yes 70785196
chr19 2775406 2775420 BATF3 JASPAR yes 70785197
chr19 2775406 2775420 ATF7 JASPAR yes 112097320
chr19 2775406 2775420 BATF3 JASPAR yes 112097321
chr19 2775407 2775419 JDP2 JASPAR yes 70785198
chr19 2775407 2775419 JDP2 JASPAR yes 112097322
chr19 2775409 2775414 ATF1 TRANSFAC yes 70785199
chr19 2775409 2775414 ATF1 TRANSFAC yes 112097323
chr19 2775409 2775417 CREB1 JASPAR yes 70785200
chr19 2775409 2775417 CREB1 JASPAR yes 112097324
chr19 2775411 2775416 ATF1 TRANSFAC yes 70785201
chr19 2775411 2775416 ATF1 TRANSFAC yes 112097325
chr19 2775431 2775445 CREB3 JASPAR yes 70785202
chr19 2775431 2775445 CREB3 JASPAR yes 112097326
chr19 2775432 2775446 XBP1 JASPAR yes 70785203
chr19 2775432 2775446 XBP1 JASPAR yes 112097327
chr19 2775452 2775464 FOXI1 JASPAR yes 70785204
chr19 2775452 2775464 FOXI1 JASPAR yes 112097328
chr19 2775476 2775491 AR JASPAR yes 70785205
chr19 2775476 2775491 AR JASPAR yes 112097329
chr19 2775485 2775494 HIC2 JASPAR yes 70785206
chr19 2775485 2775494 HIC2 JASPAR yes 112097330
SNP sites on vista28257[chr19:2775094-2775492]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 2775124 rs10406699 G A
MYC RARA RXRA
5388877
chr19 2775130 rs575326965 T A
ESRRA NR2F1 RARA RXRA
5388878
chr19 2775144 rs2110118 T C no 5388879
chr19 2775145 rs146211462 G A no 5388880
chr19 2775216 rs111466148 G A
REST
5388881
chr19 2775232 rs10414951 T C
REST
5388882
chr19 2775262 rs7247088 G A
LEF1 TCF7L2
5388883
chr19 2775315 rs113916383 C A
INSM1
5388884
chr19 2775337 rs759066 G T
ESR1
5388885
chr19 2775362 rs114062537 G A no 5388886
chr19 2775450 rs186112252 C T no 5388887
Genes possibly regulated by vista28257[chr19:2775094-2775492]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 2511217 2702707 - GNG7 ENSG00000176533.8 2702707 0.78 1.0 16786 27613
chr19 2714565 2721416 - DIRAS1 ENSG00000176490.4 2721416 0.95 1.0 16787 46322
chr19 2717767 2740046 - AC006538.4 ENSG00000267001.1 2740046 0.91 0.82 16788 64952
chr19 2732202 2740150 - SLC39A3 ENSG00000141873.6 2740150 0.77 0.99 16789 65056
chr19 2754712 2783369 - SGTA ENSG00000104969.5 2783369 0.53 1.0 16790 92123
chr19 2785458 2813599 + THOP1 ENSG00000172009.10 2785458 0.8 1.0 16791 90034
chr19 2819872 2835771 + ZNF554 ENSG00000172006.7 2819872 0.66 1.0 16792 55620
chr19 2841433 2860482 + ZNF555 ENSG00000186300.7 2841433 0.81 0.99 16793 34059
chr19 2867333 2878515 + ZNF556 ENSG00000172000.3 2867333 0.95 0.99 16794 8159
Expression level of Genes
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miRNAs possibly regulated by vista28257[chr19:2775094-2775492]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results