EnhancerDB
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  3. vista28258[chr19:2775891-2776162]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28258[chr19:2775891-2776162]
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Tissue distribution of vista28258
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Transcription factor that possibly regulate vista28258[chr19:2775891-2776162]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 2775897 2776353 JUND UCSC Txn Factor no Conserved 108364184
chr19 2775969 2776309 JUN UCSC Txn Factor no Conserved 108364196
chr19 2775983 2776211 RUNX3 UCSC Txn Factor no Conserved 108364199
chr19 2775878 2775893 FOXP1 JASPAR yes 70785207
chr19 2775878 2775893 FOXP1 JASPAR yes 112097407
chr19 2775912 2775923 STAT3 JASPAR yes 70785208
chr19 2775912 2775923 STAT3 JASPAR yes 112097408
chr19 2775935 2775945 HOXA2 JASPAR yes 70785209
chr19 2775935 2775945 MEOX1 JASPAR yes 70785210
chr19 2775935 2775945 HOXA2 JASPAR yes 112097409
chr19 2775935 2775945 MEOX1 JASPAR yes 112097410
chr19 2775936 2775946 POU6F2 JASPAR yes 70785211
chr19 2775936 2775946 POU6F2 JASPAR yes 112097411
chr19 2775945 2775951 ETS1 JASPAR yes 70785212
chr19 2775945 2775951 ETS1 JASPAR yes 112097412
chr19 2775948 2775953 SP1 TRANSFAC yes 70785213
chr19 2775948 2775953 SP1 TRANSFAC yes 112097413
chr19 2775948 2775954 SP1 TRANSFAC yes 70785214
chr19 2775948 2775954 SP1 TRANSFAC yes 112097414
chr19 2775948 2775955 SP1 TRANSFAC yes 70785215
chr19 2775948 2775955 SP1 TRANSFAC yes 112097415
chr19 2776013 2776025 TFAP2A JASPAR yes 70785216
chr19 2776013 2776025 TFAP2C JASPAR yes 70785217
chr19 2776013 2776025 TFAP2A JASPAR yes 112097416
chr19 2776013 2776025 TFAP2C JASPAR yes 112097417
chr19 2776017 2776022 SP1 TRANSFAC yes 70785218
chr19 2776017 2776022 SP1 TRANSFAC yes 112097418
chr19 2776017 2776026 THAP1 JASPAR yes 70785219
chr19 2776017 2776026 THAP1 JASPAR yes 112097419
chr19 2776020 2776024 LFA1 TRANSFAC yes 70785220
chr19 2776020 2776024 LFA1 TRANSFAC yes 112097420
chr19 2776029 2776045 ZNF143 JASPAR yes 70785221
chr19 2776029 2776045 ZNF143 JASPAR yes 112097421
chr19 2776034 2776049 HNF4G JASPAR yes 70785222
chr19 2776034 2776049 HNF4G JASPAR yes 112097422
chr19 2776078 2776090 ZBTB7B JASPAR yes 70785223
chr19 2776078 2776090 ZBTB7C JASPAR yes 70785224
chr19 2776078 2776090 ZBTB7B JASPAR yes 112097423
chr19 2776078 2776090 ZBTB7C JASPAR yes 112097424
chr19 2776086 2776107 IRF1 JASPAR yes 70785225
chr19 2776086 2776107 IRF1 JASPAR yes 112097425
chr19 2776088 2776103 IRF9 JASPAR yes 70785226
chr19 2776088 2776103 IRF9 JASPAR yes 112097426
chr19 2776089 2776103 IRF7 JASPAR yes 70785227
chr19 2776089 2776103 IRF8 JASPAR yes 70785228
chr19 2776089 2776103 IRF7 JASPAR yes 112097427
chr19 2776089 2776103 IRF8 JASPAR yes 112097428
chr19 2776090 2776104 STAT1 JASPAR yes 70785229
chr19 2776090 2776104 STAT1 JASPAR yes 112097429
chr19 2776090 2776105 PRDM1 JASPAR yes 70785230
chr19 2776090 2776105 STAT2 JASPAR yes 70785231
chr19 2776090 2776105 PRDM1 JASPAR yes 112097430
chr19 2776090 2776105 STAT2 JASPAR yes 112097431
chr19 2776090 2776108 IRF2 JASPAR yes 70785232
chr19 2776090 2776108 IRF2 JASPAR yes 112097432
chr19 2776091 2776103 IRF1 JASPAR yes 70785233
chr19 2776091 2776103 IRF1 JASPAR yes 112097433
chr19 2776097 2776112 RUNX2 JASPAR yes 70785234
chr19 2776097 2776112 RUNX2 JASPAR yes 112097434
chr19 2776098 2776107 RUNX2 JASPAR yes 70785235
chr19 2776098 2776107 RUNX2 JASPAR yes 112097435
chr19 2776098 2776108 RUNX3 JASPAR yes 70785236
chr19 2776098 2776108 RUNX3 JASPAR yes 112097436
chr19 2776098 2776109 RUNX1 JASPAR yes 70785237
chr19 2776098 2776109 RUNX1 JASPAR yes 112097437
chr19 2776106 2776121 JUND JASPAR yes 70785238
chr19 2776106 2776121 JUND JASPAR yes 112097438
chr19 2776107 2776120 JUN JASPAR yes 70785239
chr19 2776107 2776120 JUN JASPAR yes 112097439
chr19 2776108 2776122 ATF7 JASPAR yes 70785240
chr19 2776108 2776122 BATF3 JASPAR yes 70785241
chr19 2776108 2776122 ATF7 JASPAR yes 112097440
chr19 2776108 2776122 BATF3 JASPAR yes 112097441
chr19 2776109 2776121 JDP2 JASPAR yes 70785242
chr19 2776109 2776121 JDP2 JASPAR yes 112097442
chr19 2776109 2776124 JUND JASPAR yes 70785243
chr19 2776109 2776124 JUND JASPAR yes 112097443
chr19 2776110 2776123 JUN JASPAR yes 70785244
chr19 2776110 2776123 JUN JASPAR yes 112097444
chr19 2776111 2776116 ATF1 TRANSFAC yes 70785245
chr19 2776111 2776116 ATF1 TRANSFAC yes 112097445
chr19 2776111 2776119 CREB1 JASPAR yes 70785246
chr19 2776111 2776119 CREB1 JASPAR yes 112097446
chr19 2776112 2776124 CREB1 JASPAR yes 70785247
chr19 2776112 2776124 CREB1 JASPAR yes 112097447
chr19 2776113 2776118 ATF1 TRANSFAC yes 70785248
chr19 2776113 2776118 ATF1 TRANSFAC yes 112097448
chr19 2776120 2776125 SP1 TRANSFAC yes 70785249
chr19 2776120 2776125 SP1 TRANSFAC yes 112097449
chr19 2776120 2776126 SP1 TRANSFAC yes 70785250
chr19 2776120 2776126 SP1 TRANSFAC yes 112097450
chr19 2776134 2776149 HNF4G JASPAR yes 70785251
chr19 2776134 2776149 NR2C2 JASPAR yes 70785252
chr19 2776134 2776149 HNF4G JASPAR yes 112097451
chr19 2776134 2776149 NR2C2 JASPAR yes 112097452
chr19 2776135 2776150 HNF4A JASPAR yes 70785253
chr19 2776135 2776150 HNF4A JASPAR yes 112097453
SNP sites on vista28258[chr19:2775891-2776162]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 2775910 rs182498195 G A
JUND
5388894
chr19 2775950 rs115240418 C T
ETS1 JUND SP1
5388895
chr19 2775996 rs73522738 G A
JUN JUND RUNX3
5388896
chr19 2776031 rs150067090 T A
JUN JUND RUNX3 ZNF143
5388897
chr19 2776043 rs113579766 A G
HNF4G JUN JUND RUNX3 ZNF143
5388898
chr19 2776073 rs148766165 C T
JUN JUND RUNX3
5388899
chr19 2776128 rs144865569 G A,C
JUN JUND RUNX3
5388900
Genes possibly regulated by vista28258[chr19:2775891-2776162]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 2511217 2702707 - GNG7 ENSG00000176533.8 2702707 0.78 1.0 16786 26816
chr19 2714565 2721416 - DIRAS1 ENSG00000176490.4 2721416 0.95 1.0 16787 45525
chr19 2717767 2740046 - AC006538.4 ENSG00000267001.1 2740046 0.91 0.82 16788 64155
chr19 2732202 2740150 - SLC39A3 ENSG00000141873.6 2740150 0.77 0.99 16789 64259
chr19 2754712 2783369 - SGTA ENSG00000104969.5 2783369 0.53 1.0 16790 92793
chr19 2785458 2813599 + THOP1 ENSG00000172009.10 2785458 0.8 1.0 16791 90704
chr19 2819872 2835771 + ZNF554 ENSG00000172006.7 2819872 0.66 1.0 16792 56290
chr19 2841433 2860482 + ZNF555 ENSG00000186300.7 2841433 0.81 0.99 16793 34729
chr19 2867333 2878515 + ZNF556 ENSG00000172000.3 2867333 0.95 0.99 16794 8829
Expression level of Genes
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miRNAs possibly regulated by vista28258[chr19:2775891-2776162]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results