EnhancerDB
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  3. vista28261[chr19:2888802-2889178]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28261[chr19:2888802-2889178]
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Tissue distribution of vista28261
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Transcription factor that possibly regulate vista28261[chr19:2888802-2889178]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 2888809 2888819 NHLH1 JASPAR yes 70785301
chr19 2888809 2888819 NHLH1 JASPAR yes 112099955
chr19 2888813 2888828 TFAP2A JASPAR yes 70785302
chr19 2888813 2888828 TFAP2C JASPAR yes 70785303
chr19 2888813 2888828 TFAP2A JASPAR yes 112099956
chr19 2888813 2888828 TFAP2C JASPAR yes 112099957
chr19 2888815 2888828 TFAP2A JASPAR yes 70785304
chr19 2888815 2888828 TFAP2B JASPAR yes 70785305
chr19 2888815 2888828 TFAP2C JASPAR yes 70785306
chr19 2888815 2888828 TFAP2A JASPAR yes 112099958
chr19 2888815 2888828 TFAP2B JASPAR yes 112099959
chr19 2888815 2888828 TFAP2C JASPAR yes 112099960
chr19 2888816 2888827 EBF1 JASPAR yes 70785307
chr19 2888816 2888827 EBF1 JASPAR yes 112099961
chr19 2888822 2888837 ESR2 JASPAR yes 70785308
chr19 2888822 2888837 ESR2 JASPAR yes 112099962
chr19 2888823 2888827 LFA1 TRANSFAC yes 70785309
chr19 2888823 2888827 LFA1 TRANSFAC yes 112099963
chr19 2888838 2888848 SP1 JASPAR yes 70785310
chr19 2888838 2888848 SP1 JASPAR yes 112099964
chr19 2888839 2888846 CEBPA TRANSFAC yes 70785311
chr19 2888839 2888846 CEBPA TRANSFAC yes 112099965
chr19 2888844 2888849 SP1 TRANSFAC yes 70785312
chr19 2888844 2888849 SP1 TRANSFAC yes 112099966
chr19 2888851 2888867 ZNF143 JASPAR yes 70785313
chr19 2888851 2888867 ZNF143 JASPAR yes 112099967
chr19 2888876 2888881 SP1 TRANSFAC yes 70785314
chr19 2888876 2888881 SP1 TRANSFAC yes 112099968
chr19 2888877 2888882 SP1 TRANSFAC yes 70785315
chr19 2888877 2888882 SP1 TRANSFAC yes 112099969
chr19 2888888 2888898 BARHL2 JASPAR yes 70785316
chr19 2888888 2888898 BARHL2 JASPAR yes 112099970
chr19 2888900 2888904 NFE TRANSFAC yes 70785317
chr19 2888900 2888904 NFE TRANSFAC yes 112099971
chr19 2888901 2888919 SRF JASPAR yes 70785318
chr19 2888901 2888919 SRF JASPAR yes 112099972
chr19 2888910 2888924 RORA JASPAR yes 70785319
chr19 2888910 2888924 RORA JASPAR yes 112099973
chr19 2888912 2888923 RUNX1 JASPAR yes 70785320
chr19 2888912 2888923 RUNX1 JASPAR yes 112099974
chr19 2888918 2888922 YY1 TRANSFAC yes 70785321
chr19 2888918 2888922 YY1 TRANSFAC yes 112099975
chr19 2888949 2888960 TFAP2A JASPAR yes 70785322
chr19 2888949 2888960 TFAP2C JASPAR yes 70785323
chr19 2888949 2888960 TFAP2A JASPAR yes 112099976
chr19 2888949 2888960 TFAP2C JASPAR yes 112099977
chr19 2888981 2888991 SP1 JASPAR yes 70785324
chr19 2888981 2888991 SP1 JASPAR yes 112099978
chr19 2888985 2889006 REST JASPAR yes 70785325
chr19 2888985 2889006 REST JASPAR yes 112099979
chr19 2888987 2888999 ZBTB7A JASPAR yes 70785326
chr19 2888987 2888999 ZBTB7A JASPAR yes 112099980
chr19 2888988 2889000 ZBTB7C JASPAR yes 70785327
chr19 2888988 2889000 ZBTB7C JASPAR yes 112099981
chr19 2888988 2889006 ESR1 JASPAR yes 70785328
chr19 2888988 2889006 ESR1 JASPAR yes 112099982
chr19 2889019 2889032 ELF1 JASPAR yes 70785329
chr19 2889019 2889032 ELF1 JASPAR yes 112099983
chr19 2889020 2889032 EHF JASPAR yes 70785330
chr19 2889020 2889032 ELF1 JASPAR yes 70785331
chr19 2889020 2889032 EHF JASPAR yes 112099984
chr19 2889020 2889032 ELF1 JASPAR yes 112099985
chr19 2889020 2889033 ELF3 JASPAR yes 70785332
chr19 2889020 2889033 ELF3 JASPAR yes 112099986
chr19 2889021 2889032 ELF5 JASPAR yes 70785333
chr19 2889021 2889032 ELF5 JASPAR yes 112099987
chr19 2889022 2889029 ETS1 TRANSFAC yes 70785334
chr19 2889022 2889029 ETS1 TRANSFAC yes 112099988
chr19 2889024 2889043 CTCF JASPAR yes 70785335
chr19 2889024 2889043 CTCF JASPAR yes 112099989
chr19 2889028 2889040 INSM1 JASPAR yes 70785336
chr19 2889028 2889040 INSM1 JASPAR yes 112099990
chr19 2889030 2889048 ESR1 JASPAR yes 70785337
chr19 2889030 2889048 ESR1 JASPAR yes 112099991
chr19 2889033 2889040 SP1 TRANSFAC yes 70785338
chr19 2889033 2889040 SP1 TRANSFAC yes 112099992
chr19 2889035 2889040 SP1 TRANSFAC yes 70785339
chr19 2889035 2889040 SP1 TRANSFAC yes 112099993
chr19 2889050 2889055 TFAP2A TRANSFAC yes 70785340
chr19 2889050 2889055 TFAP2A TRANSFAC yes 112099994
chr19 2889050 2889056 MZF1 JASPAR yes 70785341
chr19 2889050 2889056 MZF1 JASPAR yes 112099995
chr19 2889057 2889068 NRF1 JASPAR yes 70785342
chr19 2889057 2889068 NRF1 JASPAR yes 112099996
chr19 2889058 2889069 NRF1 JASPAR yes 70785343
chr19 2889058 2889069 NRF1 JASPAR yes 112099997
chr19 2889068 2889072 H4TF2 TRANSFAC yes 70785344
chr19 2889068 2889072 H4TF2 TRANSFAC yes 112099998
chr19 2889072 2889087 TFAP2A JASPAR yes 70785345
chr19 2889072 2889087 TFAP2C JASPAR yes 70785346
chr19 2889072 2889087 TFAP2A JASPAR yes 112099999
chr19 2889072 2889087 TFAP2C JASPAR yes 112100000
chr19 2889074 2889089 TFAP2A JASPAR yes 70785347
chr19 2889074 2889089 TFAP2A JASPAR yes 112100001
chr19 2889075 2889086 TFAP2A JASPAR yes 70785348
chr19 2889075 2889086 TFAP2B JASPAR yes 70785349
chr19 2889075 2889086 TFAP2C JASPAR yes 70785350
chr19 2889075 2889086 TFAP2A JASPAR yes 112100002
chr19 2889075 2889086 TFAP2B JASPAR yes 112100003
chr19 2889075 2889086 TFAP2C JASPAR yes 112100004
chr19 2889124 2889134 ID4 JASPAR yes 70785351
chr19 2889124 2889134 TCF3 JASPAR yes 70785352
chr19 2889124 2889134 TCF4 JASPAR yes 70785353
chr19 2889124 2889134 ID4 JASPAR yes 112100005
chr19 2889124 2889134 TCF3 JASPAR yes 112100006
chr19 2889124 2889134 TCF4 JASPAR yes 112100007
chr19 2889125 2889134 SNAI2 JASPAR yes 70785354
chr19 2889125 2889134 SNAI2 JASPAR yes 112100008
chr19 2889126 2889131 USF2 TRANSFAC yes 70785355
chr19 2889126 2889131 USF2 TRANSFAC yes 112100009
chr19 2889129 2889133 NFE TRANSFAC yes 70785356
chr19 2889129 2889133 NFE TRANSFAC yes 112100010
chr19 2889147 2889159 ELF1 JASPAR yes 70785357
chr19 2889147 2889159 ELF4 JASPAR yes 70785358
chr19 2889147 2889159 ELF1 JASPAR yes 112100011
chr19 2889147 2889159 ELF4 JASPAR yes 112100012
chr19 2889147 2889160 ELF3 JASPAR yes 70785359
chr19 2889147 2889160 ELF3 JASPAR yes 112100013
chr19 2889148 2889159 SPDEF JASPAR yes 70785360
chr19 2889148 2889159 SPDEF JASPAR yes 112100014
chr19 2889149 2889158 ELK4 JASPAR yes 70785361
chr19 2889149 2889158 ELK4 JASPAR yes 112100015
chr19 2889149 2889159 ETV3 JASPAR yes 70785362
chr19 2889149 2889159 ETV5 JASPAR yes 70785363
chr19 2889149 2889159 ETV3 JASPAR yes 112100016
chr19 2889149 2889159 ETV5 JASPAR yes 112100017
chr19 2889154 2889168 CREB3 JASPAR yes 70785364
chr19 2889154 2889168 CREB3 JASPAR yes 112100018
chr19 2889155 2889172 PAX1 JASPAR yes 70785365
chr19 2889155 2889172 PAX9 JASPAR yes 70785366
chr19 2889155 2889172 PAX1 JASPAR yes 112100019
chr19 2889155 2889172 PAX9 JASPAR yes 112100020
chr19 2889156 2889167 NFE2L2 JASPAR yes 70785367
chr19 2889156 2889167 NFE2L2 JASPAR yes 112100021
chr19 2889157 2889162 ATF1 TRANSFAC yes 70785368
chr19 2889157 2889162 ATF1 TRANSFAC yes 112100022
chr19 2889162 2889174 CREB1 JASPAR yes 70785369
chr19 2889162 2889174 CREB1 JASPAR yes 112100023
chr19 2889176 2889188 PBX1 JASPAR yes 70785370
chr19 2889176 2889188 PBX1 JASPAR yes 112100024
SNP sites on vista28261[chr19:2888802-2889178]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 2888827 rs484537 C A
EBF1 ESR2 LFA1 TFAP2A TFAP2B TFAP2C
5389399
chr19 2888857 rs73523654 C T
ZNF143
5389400
chr19 2888930 rs6510715 C G no 5389401
chr19 2888943 rs79236977 C T no 5389402
chr19 2888944 rs73918826 G A no 5389403
chr19 2889110 rs539658388 G C no 5389404
chr19 2889166 rs7507968 C T
CREB1 CREB3 NFE2L2 PAX1 PAX9
5389405
Genes possibly regulated by vista28261[chr19:2888802-2889178]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 2819872 2835771 + ZNF554 ENSG00000172006.7 2819872 0.66 1.0 16792 31070
chr19 2841433 2860482 + ZNF555 ENSG00000186300.7 2841433 0.81 0.99 16793 52631
chr19 2867333 2878515 + ZNF556 ENSG00000172000.3 2867333 0.95 0.99 16794 78531
chr19 2900896 2918474 + ZNF57 ENSG00000171970.8 2900896 0.67 0.99 16795 88282
chr19 2933216 2944969 - ZNF77 ENSG00000175691.8 2944969 0.59 1.0 16796 44209
chr19 2977444 2995177 + TLE6 ENSG00000104953.14 2977444 0.87 1.0 16797 11734
Expression level of Genes
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miRNAs possibly regulated by vista28261[chr19:2888802-2889178]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results