EnhancerDB
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  3. vista28265[chr19:3035530-3035851]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28265[chr19:3035530-3035851]
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Tissue distribution of vista28265
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Transcription factor that possibly regulate vista28265[chr19:3035530-3035851]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 3034854 3036810 POLR2A UCSC Txn Factor no Conserved 108364852
chr19 3035283 3035672 PHF8 UCSC Txn Factor no Conserved 108364929
chr19 3035508 3035828 JUND UCSC Txn Factor no Conserved 108364998
chr19 3035537 3035921 NFYB UCSC Txn Factor no Conserved 108365014
chr19 3035539 3035953 RFX5 UCSC Txn Factor no Conserved 108365019
chr19 3035539 3036094 NFYA UCSC Txn Factor no Conserved 108365020
chr19 3035550 3035879 FOS UCSC Txn Factor no Conserved 108365029
chr19 3035559 3035915 SP1 UCSC Txn Factor no Conserved 108365037
chr19 3035527 3035537 NFATC3 JASPAR yes 70785445
chr19 3035527 3035537 NFATC3 JASPAR yes 112106072
chr19 3035529 3035535 ETS1 JASPAR yes 70785446
chr19 3035529 3035535 ETS1 JASPAR yes 112106073
chr19 3035529 3035550 IRF1 JASPAR yes 70785447
chr19 3035529 3035550 IRF1 JASPAR yes 112106074
chr19 3035530 3035545 FOXP1 JASPAR yes 70785448
chr19 3035530 3035545 FOXP1 JASPAR yes 112106075
chr19 3035533 3035548 PRDM1 JASPAR yes 70785449
chr19 3035533 3035548 PRDM1 JASPAR yes 112106076
chr19 3035535 3035556 IRF1 JASPAR yes 70785450
chr19 3035535 3035556 IRF1 JASPAR yes 112106077
chr19 3035538 3035552 SPIC JASPAR yes 70785451
chr19 3035538 3035552 SPIC JASPAR yes 112106078
chr19 3035539 3035554 PRDM1 JASPAR yes 70785452
chr19 3035539 3035554 PRDM1 JASPAR yes 112106079
chr19 3035555 3035567 NHLH1 JASPAR yes 70785453
chr19 3035555 3035567 NHLH1 JASPAR yes 112106080
chr19 3035607 3035612 SP1 TRANSFAC yes 70785454
chr19 3035607 3035612 SP1 TRANSFAC yes 112106081
chr19 3035607 3035613 SP1 TRANSFAC yes 70785455
chr19 3035607 3035613 SP1 TRANSFAC yes 112106082
chr19 3035622 3035632 RELA JASPAR yes 70785456
chr19 3035622 3035632 REL JASPAR yes 70785457
chr19 3035622 3035632 RELA JASPAR yes 112106083
chr19 3035622 3035632 REL JASPAR yes 112106084
chr19 3035622 3035633 NFKB1 JASPAR yes 70785458
chr19 3035622 3035633 NFKB1 JASPAR yes 112106085
chr19 3035624 3035634 TEAD4 JASPAR yes 70785459
chr19 3035624 3035634 TEAD4 JASPAR yes 112106086
chr19 3035628 3035633 ETS2 TRANSFAC yes 70785460
chr19 3035628 3035633 ETS2 TRANSFAC yes 112106087
chr19 3035637 3035657 RREB1 JASPAR yes 70785461
chr19 3035637 3035657 RREB1 JASPAR yes 112106088
chr19 3035638 3035650 ZBTB7C JASPAR yes 70785462
chr19 3035638 3035650 ZBTB7C JASPAR yes 112106089
chr19 3035639 3035651 ZBTB7A JASPAR yes 70785463
chr19 3035639 3035651 ZBTB7A JASPAR yes 112106090
chr19 3035647 3035659 INSM1 JASPAR yes 70785464
chr19 3035647 3035659 TFAP2A JASPAR yes 70785465
chr19 3035647 3035659 TFAP2B JASPAR yes 70785466
chr19 3035647 3035659 TFAP2C JASPAR yes 70785467
chr19 3035647 3035659 INSM1 JASPAR yes 112106091
chr19 3035647 3035659 TFAP2A JASPAR yes 112106092
chr19 3035647 3035659 TFAP2B JASPAR yes 112106093
chr19 3035647 3035659 TFAP2C JASPAR yes 112106094
chr19 3035653 3035664 E2F1 JASPAR yes 70785468
chr19 3035653 3035664 E2F1 JASPAR yes 112106095
chr19 3035656 3035671 NFYB JASPAR yes 70785469
chr19 3035656 3035671 NFYB JASPAR yes 112106096
chr19 3035658 3035674 NFYA JASPAR yes 70785470
chr19 3035658 3035674 NFYA JASPAR yes 112106097
chr19 3035659 3035677 NFYA JASPAR yes 70785471
chr19 3035659 3035677 NFYA JASPAR yes 112106098
chr19 3035663 3035667 H1TF2 TRANSFAC yes 70785472
chr19 3035663 3035667 NFE TRANSFAC yes 70785473
chr19 3035663 3035667 SRF TRANSFAC yes 70785474
chr19 3035663 3035667 H1TF2 TRANSFAC yes 112106099
chr19 3035663 3035667 NFE TRANSFAC yes 112106100
chr19 3035663 3035667 SRF TRANSFAC yes 112106101
chr19 3035669 3035684 ZBTB33 JASPAR yes 70785475
chr19 3035669 3035684 ZBTB33 JASPAR yes 112106102
chr19 3035688 3035694 ESR1 TRANSFAC yes 70785476
chr19 3035688 3035694 ESR1 TRANSFAC yes 112106103
chr19 3035690 3035694 ESR1 TRANSFAC yes 70785477
chr19 3035690 3035694 ESR1 TRANSFAC yes 112106104
chr19 3035691 3035703 CREB1 JASPAR yes 70785478
chr19 3035691 3035703 CREB1 JASPAR yes 112106105
chr19 3035691 3035706 JUND JASPAR yes 70785479
chr19 3035691 3035706 JUND JASPAR yes 112106106
chr19 3035692 3035705 JUN JASPAR yes 70785480
chr19 3035692 3035705 JUN JASPAR yes 112106107
chr19 3035693 3035707 ATF7 JASPAR yes 70785481
chr19 3035693 3035707 BATF3 JASPAR yes 70785482
chr19 3035693 3035707 CREB3 JASPAR yes 70785483
chr19 3035693 3035707 ATF7 JASPAR yes 112106108
chr19 3035693 3035707 BATF3 JASPAR yes 112106109
chr19 3035693 3035707 CREB3 JASPAR yes 112106110
chr19 3035694 3035706 JDP2 JASPAR yes 70785484
chr19 3035694 3035706 JDP2 JASPAR yes 112106111
chr19 3035694 3035709 JUND JASPAR yes 70785485
chr19 3035694 3035709 JUND JASPAR yes 112106112
chr19 3035695 3035708 JUN JASPAR yes 70785486
chr19 3035695 3035708 JUN JASPAR yes 112106113
chr19 3035696 3035701 ATF1 TRANSFAC yes 70785487
chr19 3035696 3035701 ATF1 TRANSFAC yes 112106114
chr19 3035696 3035704 CREB1 JASPAR yes 70785488
chr19 3035696 3035704 CREB1 JASPAR yes 112106115
chr19 3035698 3035703 ATF1 TRANSFAC yes 70785489
chr19 3035698 3035703 ATF1 TRANSFAC yes 112106116
chr19 3035700 3035712 HNF1B JASPAR yes 70785490
chr19 3035700 3035712 HNF1B JASPAR yes 112106117
chr19 3035710 3035725 NFYB JASPAR yes 70785491
chr19 3035710 3035725 NFYB JASPAR yes 112106118
chr19 3035712 3035728 NFYA JASPAR yes 70785492
chr19 3035712 3035728 NFYA JASPAR yes 112106119
chr19 3035713 3035731 NFYA JASPAR yes 70785493
chr19 3035713 3035731 NFYA JASPAR yes 112106120
chr19 3035717 3035721 H1TF2 TRANSFAC yes 70785494
chr19 3035717 3035721 NFE TRANSFAC yes 70785495
chr19 3035717 3035721 SRF TRANSFAC yes 70785496
chr19 3035717 3035721 H1TF2 TRANSFAC yes 112106121
chr19 3035717 3035721 NFE TRANSFAC yes 112106122
chr19 3035717 3035721 SRF TRANSFAC yes 112106123
chr19 3035721 3035726 TFAP2A TRANSFAC yes 70785497
chr19 3035721 3035726 TFAP2A TRANSFAC yes 112106124
chr19 3035721 3035727 MZF1 JASPAR yes 70785498
chr19 3035721 3035727 MZF1 JASPAR yes 112106125
chr19 3035722 3035732 GSC2 JASPAR yes 70785499
chr19 3035722 3035732 GSC JASPAR yes 70785500
chr19 3035722 3035732 GSC2 JASPAR yes 112106126
chr19 3035722 3035732 GSC JASPAR yes 112106127
chr19 3035723 3035731 OTX1 JASPAR yes 70785501
chr19 3035723 3035731 OTX1 JASPAR yes 112106128
chr19 3035723 3035732 PITX3 JASPAR yes 70785502
chr19 3035723 3035732 PITX3 JASPAR yes 112106129
chr19 3035735 3035750 NFYB JASPAR yes 70785503
chr19 3035735 3035750 NFYB JASPAR yes 112106130
chr19 3035737 3035753 NFYA JASPAR yes 70785504
chr19 3035737 3035753 NFYA JASPAR yes 112106131
chr19 3035742 3035746 H1TF2 TRANSFAC yes 70785505
chr19 3035742 3035746 NFE TRANSFAC yes 70785506
chr19 3035742 3035746 SRF TRANSFAC yes 70785507
chr19 3035742 3035746 H1TF2 TRANSFAC yes 112106132
chr19 3035742 3035746 NFE TRANSFAC yes 112106133
chr19 3035742 3035746 SRF TRANSFAC yes 112106134
chr19 3035766 3035781 NFYB JASPAR yes 70785508
chr19 3035766 3035781 NFYB JASPAR yes 112106135
chr19 3035768 3035784 NFYA JASPAR yes 70785509
chr19 3035768 3035784 NFYA JASPAR yes 112106136
chr19 3035769 3035787 NFYA JASPAR yes 70785510
chr19 3035769 3035787 NFYA JASPAR yes 112106137
chr19 3035773 3035777 H1TF2 TRANSFAC yes 70785511
chr19 3035773 3035777 NFE TRANSFAC yes 70785512
chr19 3035773 3035777 SRF TRANSFAC yes 70785513
chr19 3035773 3035777 H1TF2 TRANSFAC yes 112106138
chr19 3035773 3035777 NFE TRANSFAC yes 112106139
chr19 3035773 3035777 SRF TRANSFAC yes 112106140
chr19 3035778 3035784 ETS1 JASPAR yes 70785514
chr19 3035778 3035784 SPI1 JASPAR yes 70785515
chr19 3035778 3035784 ETS1 JASPAR yes 112106141
chr19 3035778 3035784 SPI1 JASPAR yes 112106142
chr19 3035800 3035805 SP1 TRANSFAC yes 70785516
chr19 3035800 3035805 SP1 TRANSFAC yes 112106143
chr19 3035800 3035806 SP1 TRANSFAC yes 70785517
chr19 3035800 3035806 SP1 TRANSFAC yes 112106144
chr19 3035821 3035831 SP1 JASPAR yes 70785518
chr19 3035821 3035831 SP1 JASPAR yes 112106145
chr19 3035823 3035829 SP1 TRANSFAC yes 70785519
chr19 3035823 3035829 SP1 TRANSFAC yes 112106146
SNP sites on vista28265[chr19:3035530-3035851]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 3035706 rs570809599 A G
ATF7 BATF3 CREB3 FOS HNF1B JDP2 JUN JUND NFYA NFYB POLR2A RFX5 SP1
5390523
chr19 3035707 rs115646716 T C
ATF7 BATF3 CREB3 FOS HNF1B JUN JUND NFYA NFYB POLR2A RFX5 SP1
5390524
chr19 3035766 rs10404481 C A
FOS JUND NFYA NFYB POLR2A RFX5 SP1
5390525
Genes possibly regulated by vista28265[chr19:3035530-3035851]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 2933216 2944969 - ZNF77 ENSG00000175691.8 2944969 0.59 1.0 16796 9439
chr19 2977444 2995177 + TLE6 ENSG00000104953.14 2977444 0.87 1.0 16797 41914
chr19 2997636 3047633 - TLE2 ENSG00000065717.10 3047633 0.79 1.0 16798 88218
chr19 3052908 3063105 - AES ENSG00000104964.10 3063105 0.68 1.0 16799 72746
chr19 3094408 3124002 + GNA11 ENSG00000088256.4 3094408 0.65 1.0 16800 41443
Expression level of Genes
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miRNAs possibly regulated by vista28265[chr19:3035530-3035851]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results