EnhancerDB
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  3. vista28266[chr19:3124672-3124910]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28266[chr19:3124672-3124910]
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Tissue distribution of vista28266
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Transcription factor that possibly regulate vista28266[chr19:3124672-3124910]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 3124672 3124684 PKNOX2 JASPAR yes 70785520
chr19 3124672 3124684 TGIF1 JASPAR yes 70785521
chr19 3124672 3124684 TGIF2 JASPAR yes 70785522
chr19 3124672 3124684 PKNOX2 JASPAR yes 112113320
chr19 3124672 3124684 TGIF1 JASPAR yes 112113321
chr19 3124672 3124684 TGIF2 JASPAR yes 112113322
chr19 3124686 3124701 AR JASPAR yes 70785523
chr19 3124686 3124701 AR JASPAR yes 112113323
chr19 3124708 3124714 ZNF354C JASPAR yes 70785524
chr19 3124708 3124714 ZNF354C JASPAR yes 112113324
chr19 3124736 3124744 EHF JASPAR yes 70785525
chr19 3124736 3124744 EHF JASPAR yes 112113325
chr19 3124738 3124743 ETS2 TRANSFAC yes 70785526
chr19 3124738 3124743 ETS2 TRANSFAC yes 112113326
chr19 3124770 3124776 ZNF354C JASPAR yes 70785527
chr19 3124770 3124776 ZNF354C JASPAR yes 112113327
chr19 3124798 3124802 NFE TRANSFAC yes 70785528
chr19 3124798 3124802 NFE TRANSFAC yes 112113328
chr19 3124821 3124840 CTCF JASPAR yes 70785529
chr19 3124821 3124840 CTCF JASPAR yes 112113329
chr19 3124840 3124846 NFIC JASPAR yes 70785530
chr19 3124840 3124846 NFIC JASPAR yes 112113330
chr19 3124858 3124868 ID4 JASPAR yes 70785531
chr19 3124858 3124868 TCF3 JASPAR yes 70785532
chr19 3124858 3124868 TCF4 JASPAR yes 70785533
chr19 3124858 3124868 ID4 JASPAR yes 112113331
chr19 3124858 3124868 TCF3 JASPAR yes 112113332
chr19 3124858 3124868 TCF4 JASPAR yes 112113333
chr19 3124859 3124868 SNAI2 JASPAR yes 70785534
chr19 3124859 3124868 SNAI2 JASPAR yes 112113334
chr19 3124860 3124865 USF2 TRANSFAC yes 70785535
chr19 3124860 3124865 USF2 TRANSFAC yes 112113335
chr19 3124894 3124898 NFE TRANSFAC yes 70785536
chr19 3124894 3124898 NFE TRANSFAC yes 112113336
chr19 3124898 3124902 NFE TRANSFAC yes 70785537
chr19 3124898 3124902 NFE TRANSFAC yes 112113337
SNP sites on vista28266[chr19:3124672-3124910]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 3124691 rs76497316 A G
AR
5391604
chr19 3124715 rs191977659 G A no 5391605
chr19 3124725 rs76967867 A G no 5391606
chr19 3124747 rs184526048 C T no 5391607
chr19 3124792 rs118033006 G A no 5391608
chr19 3124849 rs79028694 C T no 5391609
Genes possibly regulated by vista28266[chr19:3124672-3124910]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 2997636 3047633 - TLE2 ENSG00000065717.10 3047633 0.79 1.0 16798 22961
chr19 3052908 3063105 - AES ENSG00000104964.10 3063105 0.68 1.0 16799 38433
chr19 3094408 3124002 + GNA11 ENSG00000088256.4 3094408 0.65 1.0 16800 69736
chr19 3136191 3163767 + GNA15 ENSG00000060558.3 3136191 0.88 1.0 16801 88719
chr19 3172344 3180329 + S1PR4 ENSG00000125910.4 3172344 0.92 0.97 16802 52566
chr19 3185561 3209573 + NCLN ENSG00000125912.6 3185561 0.65 1.0 16803 39349
chr19 3224701 3297074 + CELF5 ENSG00000161082.8 3224701 0.97 1.0 16804 209
Expression level of Genes
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miRNAs possibly regulated by vista28266[chr19:3124672-3124910]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results