EnhancerDB
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  3. vista28270[chr19:3153392-3153939]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28270[chr19:3153392-3153939]
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Tissue distribution of vista28270
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Transcription factor that possibly regulate vista28270[chr19:3153392-3153939]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 3153397 3153402 GATA2 JASPAR yes 70785714
chr19 3153399 3153411 PBX1 JASPAR yes 70785715
chr19 3153402 3153423 ZNF263 JASPAR yes 70785716
chr19 3153405 3153426 ZNF263 JASPAR yes 70785717
chr19 3153414 3153435 ZNF263 JASPAR yes 70785718
chr19 3153415 3153421 ZNF354C JASPAR yes 70785719
chr19 3153418 3153439 ZNF263 JASPAR yes 70785720
chr19 3153433 3153438 GATA2 JASPAR yes 70785721
chr19 3153435 3153447 PBX1 JASPAR yes 70785722
chr19 3153438 3153459 ZNF263 JASPAR yes 70785723
chr19 3153442 3153463 ZNF263 JASPAR yes 70785724
chr19 3153447 3153452 MYB TRANSFAC yes 70785725
chr19 3153450 3153471 ZNF263 JASPAR yes 70785726
chr19 3153454 3153475 ZNF263 JASPAR yes 70785727
chr19 3153462 3153483 ZNF263 JASPAR yes 70785728
chr19 3153463 3153469 ZNF354C JASPAR yes 70785729
chr19 3153466 3153487 ZNF263 JASPAR yes 70785730
chr19 3153467 3153479 PBX1 JASPAR yes 70785731
chr19 3153471 3153483 PBX1 JASPAR yes 70785732
chr19 3153475 3153487 PBX1 JASPAR yes 70785733
chr19 3153479 3153499 RREB1 JASPAR yes 70785734
chr19 3153495 3153501 ZNF354C JASPAR yes 70785735
chr19 3153502 3153513 DMRT3 JASPAR yes 70785736
chr19 3153513 3153534 ZNF263 JASPAR yes 70785737
chr19 3153516 3153537 ZNF263 JASPAR yes 70785738
chr19 3153525 3153546 ZNF263 JASPAR yes 70785739
chr19 3153526 3153532 ZNF354C JASPAR yes 70785740
chr19 3153534 3153540 ZNF354C JASPAR yes 70785741
chr19 3153536 3153541 GATA2 JASPAR yes 70785742
chr19 3153544 3153549 GATA2 JASPAR yes 70785743
chr19 3153553 3153574 ZNF263 JASPAR yes 70785744
chr19 3153554 3153560 ZNF354C JASPAR yes 70785745
chr19 3153565 3153586 ZNF263 JASPAR yes 70785746
chr19 3153566 3153572 ZNF354C JASPAR yes 70785747
chr19 3153577 3153598 ZNF263 JASPAR yes 70785748
chr19 3153586 3153592 ZNF354C JASPAR yes 70785749
chr19 3153598 3153618 RREB1 JASPAR yes 70785750
chr19 3153599 3153607 BSX JASPAR yes 70785751
chr19 3153599 3153608 VENTX JASPAR yes 70785752
chr19 3153605 3153626 ZNF263 JASPAR yes 70785753
chr19 3153619 3153633 RXRB JASPAR yes 70785754
chr19 3153619 3153633 RXRG JASPAR yes 70785755
chr19 3153628 3153648 RREB1 JASPAR yes 70785756
chr19 3153636 3153656 RREB1 JASPAR yes 70785757
chr19 3153640 3153645 SP1 TRANSFAC yes 70785758
chr19 3153644 3153665 ZNF263 JASPAR yes 70785759
chr19 3153645 3153651 ZNF354C JASPAR yes 70785760
chr19 3153648 3153653 NFY TRANSFAC yes 70785761
chr19 3153659 3153680 ZNF263 JASPAR yes 70785762
chr19 3153663 3153684 ZNF263 JASPAR yes 70785763
chr19 3153664 3153676 PBX1 JASPAR yes 70785764
chr19 3153667 3153688 ZNF263 JASPAR yes 70785765
chr19 3153676 3153682 ZNF354C JASPAR yes 70785766
chr19 3153678 3153683 GATA2 JASPAR yes 70785767
chr19 3153680 3153692 PBX1 JASPAR yes 70785768
chr19 3153683 3153704 ZNF263 JASPAR yes 70785769
chr19 3153691 3153696 SP1 TRANSFAC yes 70785770
chr19 3153695 3153700 SP1 TRANSFAC yes 70785771
chr19 3153700 3153721 ZNF263 JASPAR yes 70785772
chr19 3153709 3153721 PBX1 JASPAR yes 70785773
chr19 3153712 3153733 ZNF263 JASPAR yes 70785774
chr19 3153724 3153729 SP1 TRANSFAC yes 70785775
chr19 3153737 3153749 PBX1 JASPAR yes 70785776
chr19 3153748 3153769 ZNF263 JASPAR yes 70785777
chr19 3153749 3153755 ZNF354C JASPAR yes 70785778
chr19 3153757 3153763 ZNF354C JASPAR yes 70785779
chr19 3153761 3153773 PBX1 JASPAR yes 70785780
chr19 3153773 3153793 RREB1 JASPAR yes 70785781
chr19 3153795 3153812 PAX1 JASPAR yes 70785782
chr19 3153806 3153821 HNF1A JASPAR yes 70785783
chr19 3153822 3153843 ZNF263 JASPAR yes 70785784
chr19 3153837 3153858 ZNF263 JASPAR yes 70785785
chr19 3153841 3153862 ZNF263 JASPAR yes 70785786
chr19 3153842 3153854 PBX1 JASPAR yes 70785787
chr19 3153845 3153866 ZNF263 JASPAR yes 70785788
chr19 3153862 3153874 PBX1 JASPAR yes 70785789
chr19 3153873 3153894 ZNF263 JASPAR yes 70785790
chr19 3153881 3153902 ZNF263 JASPAR yes 70785791
chr19 3153882 3153888 ZNF354C JASPAR yes 70785792
chr19 3153883 3153895 INSM1 JASPAR yes 70785793
chr19 3153883 3153903 RREB1 JASPAR yes 70785794
chr19 3153885 3153895 GCM2 JASPAR yes 70785795
chr19 3153885 3153905 RREB1 JASPAR yes 70785796
chr19 3153886 3153896 ZNF740 JASPAR yes 70785797
chr19 3153886 3153906 RREB1 JASPAR yes 70785798
chr19 3153887 3153902 RUNX2 JASPAR yes 70785799
chr19 3153889 3153909 RREB1 JASPAR yes 70785800
chr19 3153893 3153913 RREB1 JASPAR yes 70785801
chr19 3153897 3153902 SP1 TRANSFAC yes 70785802
chr19 3153901 3153922 ZNF263 JASPAR yes 70785803
chr19 3153902 3153908 ZNF354C JASPAR yes 70785804
chr19 3153902 3153922 RREB1 JASPAR yes 70785805
chr19 3153917 3153938 ZNF263 JASPAR yes 70785806
chr19 3153930 3153936 ZNF354C JASPAR yes 70785807
chr19 3153932 3153937 GATA2 JASPAR yes 70785808
SNP sites on vista28270[chr19:3153392-3153939]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 3153464 rs200916319 GTGGA G
ZNF263 ZNF354C
5391940
chr19 3153464 rs377738970 GTGGA G
ZNF263 ZNF354C
5391941
chr19 3153482 rs114710334 G A
PBX1 RREB1 ZNF263
5391942
chr19 3153726 rs139317275 G GT
SP1 ZNF263
5391943
chr19 3153752 rs111174144 G A
ZNF263 ZNF354C
5391944
chr19 3153761 rs150539984 G A
PBX1 ZNF263 ZNF354C
5391945
chr19 3153774 rs310676 A G
RREB1
5391946
chr19 3153885 rs114271665 G A
GCM2 INSM1 RREB1 ZNF263 ZNF354C
5391947
Genes possibly regulated by vista28270[chr19:3153392-3153939]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 3052908 3063105 - AES ENSG00000104964.10 3063105 0.68 1.0 16799 9713
chr19 3094408 3124002 + GNA11 ENSG00000088256.4 3094408 0.65 1.0 16800 41016
chr19 3136191 3163767 + GNA15 ENSG00000060558.3 3136191 0.88 1.0 16801 82799
chr19 3172344 3180329 + S1PR4 ENSG00000125910.4 3172344 0.92 0.97 16802 81595
chr19 3185561 3209573 + NCLN ENSG00000125912.6 3185561 0.65 1.0 16803 68378
chr19 3224701 3297074 + CELF5 ENSG00000161082.8 3224701 0.97 1.0 16804 29238
Expression level of Genes
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miRNAs possibly regulated by vista28270[chr19:3153392-3153939]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results