EnhancerDB
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  3. vista28271[chr19:3154006-3154458]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28271[chr19:3154006-3154458]
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Tissue distribution of vista28271
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Transcription factor that possibly regulate vista28271[chr19:3154006-3154458]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 3154013 3154025 PBX1 JASPAR yes 70785809
chr19 3154025 3154031 ZNF354C JASPAR yes 70785810
chr19 3154031 3154037 JUN TRANSFAC yes 70785811
chr19 3154041 3154062 ZNF263 JASPAR yes 70785812
chr19 3154049 3154058 SNAI2 JASPAR yes 70785813
chr19 3154049 3154059 ID4 JASPAR yes 70785814
chr19 3154052 3154068 ZNF143 JASPAR yes 70785815
chr19 3154054 3154060 ZNF354C JASPAR yes 70785816
chr19 3154057 3154069 PBX1 JASPAR yes 70785817
chr19 3154061 3154073 PBX1 JASPAR yes 70785818
chr19 3154064 3154085 ZNF263 JASPAR yes 70785819
chr19 3154087 3154092 GATA2 JASPAR yes 70785820
chr19 3154095 3154100 GATA2 JASPAR yes 70785821
chr19 3154097 3154109 PBX1 JASPAR yes 70785822
chr19 3154101 3154113 PBX1 JASPAR yes 70785823
chr19 3154121 3154133 PBX1 JASPAR yes 70785824
chr19 3154124 3154145 ZNF263 JASPAR yes 70785825
chr19 3154132 3154153 ZNF263 JASPAR yes 70785826
chr19 3154133 3154139 ZNF354C JASPAR yes 70785827
chr19 3154139 3154144 GATA2 JASPAR yes 70785828
chr19 3154141 3154153 PBX1 JASPAR yes 70785829
chr19 3154144 3154165 ZNF263 JASPAR yes 70785830
chr19 3154145 3154157 PBX1 JASPAR yes 70785831
chr19 3154148 3154169 ZNF263 JASPAR yes 70785832
chr19 3154156 3154161 SP1 TRANSFAC yes 70785833
chr19 3154161 3154182 ZNF263 JASPAR yes 70785834
chr19 3154162 3154174 PBX1 JASPAR yes 70785835
chr19 3154165 3154186 ZNF263 JASPAR yes 70785836
chr19 3154166 3154178 PBX1 JASPAR yes 70785837
chr19 3154170 3154182 PBX1 JASPAR yes 70785838
chr19 3154174 3154186 PBX1 JASPAR yes 70785839
chr19 3154177 3154198 ZNF263 JASPAR yes 70785840
chr19 3154189 3154210 ZNF263 JASPAR yes 70785841
chr19 3154190 3154196 ZNF354C JASPAR yes 70785842
chr19 3154201 3154222 ZNF263 JASPAR yes 70785843
chr19 3154202 3154208 ZNF354C JASPAR yes 70785844
chr19 3154210 3154216 ZNF354C JASPAR yes 70785845
chr19 3154214 3154226 PBX1 JASPAR yes 70785846
chr19 3154226 3154246 RREB1 JASPAR yes 70785847
chr19 3154233 3154253 RREB1 JASPAR yes 70785848
chr19 3154236 3154256 RREB1 JASPAR yes 70785849
chr19 3154240 3154260 RREB1 JASPAR yes 70785850
chr19 3154244 3154249 SP1 TRANSFAC yes 70785851
chr19 3154247 3154268 ZNF263 JASPAR yes 70785852
chr19 3154252 3154264 PBX1 JASPAR yes 70785853
chr19 3154256 3154268 PBX1 JASPAR yes 70785854
chr19 3154259 3154280 ZNF263 JASPAR yes 70785855
chr19 3154271 3154292 ZNF263 JASPAR yes 70785856
chr19 3154272 3154278 ZNF354C JASPAR yes 70785857
chr19 3154283 3154304 ZNF263 JASPAR yes 70785858
chr19 3154284 3154290 ZNF354C JASPAR yes 70785859
chr19 3154292 3154298 ZNF354C JASPAR yes 70785860
chr19 3154296 3154308 PBX1 JASPAR yes 70785861
chr19 3154308 3154328 RREB1 JASPAR yes 70785862
chr19 3154315 3154335 RREB1 JASPAR yes 70785863
chr19 3154326 3154331 SP1 TRANSFAC yes 70785864
chr19 3154330 3154347 PAX1 JASPAR yes 70785865
chr19 3154330 3154347 PAX9 JASPAR yes 70785866
chr19 3154341 3154362 ZNF263 JASPAR yes 70785867
chr19 3154353 3154374 ZNF263 JASPAR yes 70785868
chr19 3154354 3154360 ZNF354C JASPAR yes 70785869
chr19 3154366 3154372 ZNF354C JASPAR yes 70785870
chr19 3154376 3154397 ZNF263 JASPAR yes 70785871
chr19 3154381 3154402 ZNF263 JASPAR yes 70785872
chr19 3154382 3154388 ZNF354C JASPAR yes 70785873
chr19 3154385 3154405 RREB1 JASPAR yes 70785874
chr19 3154388 3154399 E2F6 JASPAR yes 70785875
chr19 3154389 3154394 SP1 TRANSFAC yes 70785876
chr19 3154389 3154409 RREB1 JASPAR yes 70785877
chr19 3154392 3154398 MAZ TRANSFAC yes 70785878
chr19 3154393 3154413 RREB1 JASPAR yes 70785879
chr19 3154394 3154404 SP1 JASPAR yes 70785880
chr19 3154397 3154402 SP1 TRANSFAC yes 70785881
chr19 3154402 3154408 ZNF354C JASPAR yes 70785882
chr19 3154417 3154438 ZNF263 JASPAR yes 70785883
chr19 3154418 3154424 ZNF354C JASPAR yes 70785884
chr19 3154430 3154436 ZNF354C JASPAR yes 70785885
chr19 3154432 3154437 GATA2 JASPAR yes 70785886
chr19 3154446 3154458 PBX1 JASPAR yes 70785887
SNP sites on vista28271[chr19:3154006-3154458]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 3154013 rs114826966 G A
PBX1
5391950
chr19 3154035 rs141532895 G C
JUN
5391951
chr19 3154060 rs140588083 TGATG T
PBX1 ZNF143 ZNF263 ZNF354C
5391952
chr19 3154096 rs369408501 G A
GATA2
5391953
chr19 3154336 rs553001673 C T
PAX1 PAX9
5391954
chr19 3154414 rs310675 C G no 5391955
Genes possibly regulated by vista28271[chr19:3154006-3154458]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 3052908 3063105 - AES ENSG00000104964.10 3063105 0.68 1.0 16799 9099
chr19 3094408 3124002 + GNA11 ENSG00000088256.4 3094408 0.65 1.0 16800 40402
chr19 3136191 3163767 + GNA15 ENSG00000060558.3 3136191 0.88 1.0 16801 82185
chr19 3172344 3180329 + S1PR4 ENSG00000125910.4 3172344 0.92 0.97 16802 82114
chr19 3185561 3209573 + NCLN ENSG00000125912.6 3185561 0.65 1.0 16803 68897
chr19 3224701 3297074 + CELF5 ENSG00000161082.8 3224701 0.97 1.0 16804 29757
Expression level of Genes
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miRNAs possibly regulated by vista28271[chr19:3154006-3154458]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results