EnhancerDB
  1. Home
  2. Enhancers
  3. vista28273[chr19:3177322-3177366]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28273[chr19:3177322-3177366]
Back to top
Tissue distribution of vista28273
Back to top
Transcription factor that possibly regulate vista28273[chr19:3177322-3177366]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 3176947 3177697 POLR2A UCSC Txn Factor no Conserved 108365336
chr19 3177323 3177336 SMAD2 JASPAR yes 70785897
chr19 3177323 3177336 SMAD2 JASPAR yes 112115475
chr19 3177328 3177342 PLAG1 JASPAR yes 70785898
chr19 3177328 3177342 PLAG1 JASPAR yes 112115476
chr19 3177329 3177338 NKX3-2 JASPAR yes 70785899
chr19 3177329 3177338 NKX3-2 JASPAR yes 112115477
chr19 3177350 3177360 SREBF1 JASPAR yes 70785900
chr19 3177350 3177360 SREBF1 JASPAR yes 112115478
chr19 3177356 3177370 JUN JASPAR yes 70785901
chr19 3177356 3177370 JUN JASPAR yes 112115479
chr19 3177358 3177369 BATF JASPAR yes 70785902
chr19 3177358 3177369 BATF JASPAR yes 112115480
chr19 3177358 3177378 ESR1 JASPAR yes 70785903
chr19 3177358 3177378 ESR1 JASPAR yes 112115481
chr19 3177359 3177370 JUNB JASPAR yes 70785904
chr19 3177359 3177370 NFE2L2 JASPAR yes 70785905
chr19 3177359 3177370 JUNB JASPAR yes 112115482
chr19 3177359 3177370 NFE2L2 JASPAR yes 112115483
chr19 3177360 3177371 FOS JASPAR yes 70785906
chr19 3177360 3177371 FOSL1 JASPAR yes 70785907
chr19 3177360 3177371 JUND JASPAR yes 70785908
chr19 3177360 3177371 FOS JASPAR yes 112115484
chr19 3177360 3177371 FOSL1 JASPAR yes 112115485
chr19 3177360 3177371 JUND JASPAR yes 112115486
chr19 3177361 3177372 FOSL2 JASPAR yes 70785909
chr19 3177361 3177372 JUNB JASPAR yes 70785910
chr19 3177361 3177372 FOSL2 JASPAR yes 112115487
chr19 3177361 3177372 JUNB JASPAR yes 112115488
chr19 3177361 3177375 JUN JASPAR yes 70785911
chr19 3177361 3177375 JUN JASPAR yes 112115489
chr19 3177361 3177379 ESR1 JASPAR yes 70785912
chr19 3177361 3177379 ESR1 JASPAR yes 112115490
chr19 3177363 3177378 ESR2 JASPAR yes 70785913
chr19 3177363 3177378 ESR2 JASPAR yes 112115491
SNP sites on vista28273[chr19:3177322-3177366]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista28273[chr19:3177322-3177366]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 3094408 3124002 + GNA11 ENSG00000088256.4 3094408 0.65 1.0 16800 17086
chr19 3136191 3163767 + GNA15 ENSG00000060558.3 3136191 0.88 1.0 16801 58869
chr19 3172344 3180329 + S1PR4 ENSG00000125910.4 3172344 0.92 0.97 16802 95022
chr19 3185561 3209573 + NCLN ENSG00000125912.6 3185561 0.65 1.0 16803 91805
chr19 3224701 3297074 + CELF5 ENSG00000161082.8 3224701 0.97 1.0 16804 52665
Expression level of Genes
Back to top
miRNAs possibly regulated by vista28273[chr19:3177322-3177366]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results