EnhancerDB
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  3. vista28275[chr19:3231384-3231772]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28275[chr19:3231384-3231772]
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Tissue distribution of vista28275
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Transcription factor that possibly regulate vista28275[chr19:3231384-3231772]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 3231388 3231393 GATA2 JASPAR yes 70785984
chr19 3231423 3231435 PBX1 JASPAR yes 70785985
chr19 3231427 3231439 PBX1 JASPAR yes 70785986
chr19 3231430 3231451 ZNF263 JASPAR yes 70785987
chr19 3231434 3231449 MYBL2 JASPAR yes 70785988
chr19 3231446 3231467 ZNF263 JASPAR yes 70785989
chr19 3231447 3231459 PBX1 JASPAR yes 70785990
chr19 3231450 3231471 ZNF263 JASPAR yes 70785991
chr19 3231451 3231463 PBX1 JASPAR yes 70785992
chr19 3231454 3231475 ZNF263 JASPAR yes 70785993
chr19 3231455 3231467 PBX1 JASPAR yes 70785994
chr19 3231458 3231479 ZNF263 JASPAR yes 70785995
chr19 3231459 3231471 PBX1 JASPAR yes 70785996
chr19 3231462 3231483 ZNF263 JASPAR yes 70785997
chr19 3231463 3231475 PBX1 JASPAR yes 70785998
chr19 3231466 3231487 ZNF263 JASPAR yes 70785999
chr19 3231467 3231479 PBX1 JASPAR yes 70786000
chr19 3231470 3231491 ZNF263 JASPAR yes 70786001
chr19 3231471 3231483 PBX1 JASPAR yes 70786002
chr19 3231474 3231495 ZNF263 JASPAR yes 70786003
chr19 3231475 3231487 PBX1 JASPAR yes 70786004
chr19 3231478 3231499 ZNF263 JASPAR yes 70786005
chr19 3231479 3231491 PBX1 JASPAR yes 70786006
chr19 3231482 3231503 ZNF263 JASPAR yes 70786007
chr19 3231491 3231497 ZNF354C JASPAR yes 70786008
chr19 3231504 3231518 PAX6 JASPAR yes 70786009
chr19 3231507 3231519 PBX1 JASPAR yes 70786010
chr19 3231518 3231539 ZNF263 JASPAR yes 70786011
chr19 3231519 3231525 ZNF354C JASPAR yes 70786012
chr19 3231521 3231542 ZNF263 JASPAR yes 70786013
chr19 3231530 3231536 ZNF354C JASPAR yes 70786014
chr19 3231538 3231558 RREB1 JASPAR yes 70786015
chr19 3231553 3231558 SP1 TRANSFAC yes 70786016
chr19 3231558 3231564 ZNF354C JASPAR yes 70786017
chr19 3231562 3231574 PBX1 JASPAR yes 70786018
chr19 3231570 3231590 RREB1 JASPAR yes 70786019
chr19 3231585 3231590 SP1 TRANSFAC yes 70786020
chr19 3231589 3231610 ZNF263 JASPAR yes 70786021
chr19 3231590 3231596 ZNF354C JASPAR yes 70786022
chr19 3231593 3231614 ZNF263 JASPAR yes 70786023
chr19 3231594 3231606 PBX1 JASPAR yes 70786024
chr19 3231597 3231618 ZNF263 JASPAR yes 70786025
chr19 3231598 3231610 PBX1 JASPAR yes 70786026
chr19 3231601 3231622 ZNF263 JASPAR yes 70786027
chr19 3231608 3231613 GATA2 JASPAR yes 70786028
chr19 3231610 3231622 PBX1 JASPAR yes 70786029
chr19 3231614 3231626 PBX1 JASPAR yes 70786030
chr19 3231632 3231653 ZNF263 JASPAR yes 70786031
chr19 3231633 3231639 ZNF354C JASPAR yes 70786032
chr19 3231637 3231649 PBX1 JASPAR yes 70786033
chr19 3231641 3231653 PBX1 JASPAR yes 70786034
chr19 3231649 3231661 PBX1 JASPAR yes 70786035
chr19 3231652 3231657 NFY TRANSFAC yes 70786036
chr19 3231656 3231661 SP1 TRANSFAC yes 70786037
chr19 3231664 3231685 ZNF263 JASPAR yes 70786038
chr19 3231667 3231688 ZNF263 JASPAR yes 70786039
chr19 3231671 3231683 NHLH1 JASPAR yes 70786040
chr19 3231672 3231681 SNAI2 JASPAR yes 70786041
chr19 3231672 3231682 TCF3 JASPAR yes 70786042
chr19 3231672 3231682 TCF4 JASPAR yes 70786043
chr19 3231674 3231683 ZEB1 JASPAR yes 70786044
chr19 3231676 3231681 SP1 TRANSFAC yes 70786045
chr19 3231680 3231701 ZNF263 JASPAR yes 70786046
chr19 3231681 3231687 ZNF354C JASPAR yes 70786047
chr19 3231685 3231697 PBX1 JASPAR yes 70786048
chr19 3231688 3231709 ZNF263 JASPAR yes 70786049
chr19 3231689 3231701 PBX1 JASPAR yes 70786050
chr19 3231699 3231704 SP1 TRANSFAC yes 70786051
chr19 3231709 3231721 PBX1 JASPAR yes 70786052
chr19 3231712 3231717 NFY TRANSFAC yes 70786053
chr19 3231717 3231723 ZNF354C JASPAR yes 70786054
chr19 3231719 3231740 ZNF263 JASPAR yes 70786055
chr19 3231738 3231747 HIC2 JASPAR yes 70786056
chr19 3231741 3231745 LFA1 TRANSFAC yes 70786057
chr19 3231742 3231752 NEUROD2 JASPAR yes 70786058
chr19 3231746 3231766 RREB1 JASPAR yes 70786059
chr19 3231747 3231767 RREB1 JASPAR yes 70786060
chr19 3231750 3231770 RREB1 JASPAR yes 70786061
chr19 3231751 3231771 RREB1 JASPAR yes 70786062
chr19 3231754 3231759 SP1 TRANSFAC yes 70786063
chr19 3231758 3231763 SP1 TRANSFAC yes 70786064
chr19 3231762 3231767 SP1 TRANSFAC yes 70786065
SNP sites on vista28275[chr19:3231384-3231772]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 3231445 rs111427441 CGGATGGAT C
MYBL2 ZNF263
5392606
chr19 3231445 rs368514924 CGGAT C
MYBL2 ZNF263
5392607
chr19 3231445 rs573720960 CGGATGGAT C
MYBL2 ZNF263
5392608
chr19 3231445 rs763575477 CGGAT C
MYBL2 ZNF263
5392609
chr19 3231607 rs58689322 A T
PBX1 ZNF263
5392610
chr19 3231682 rs551061310 GTGGA G
NHLH1 TCF3 TCF4 ZEB1 ZNF263 ZNF354C
5392611
Genes possibly regulated by vista28275[chr19:3231384-3231772]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 3136191 3163767 + GNA15 ENSG00000060558.3 3136191 0.88 1.0 16801 4807
chr19 3172344 3180329 + S1PR4 ENSG00000125910.4 3172344 0.92 0.97 16802 40960
chr19 3185561 3209573 + NCLN ENSG00000125912.6 3185561 0.65 1.0 16803 54177
chr19 3224701 3297074 + CELF5 ENSG00000161082.8 3224701 0.97 1.0 16804 93317
Expression level of Genes
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miRNAs possibly regulated by vista28275[chr19:3231384-3231772]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results