EnhancerDB
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  3. vista28278[chr19:3338656-3338812]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28278[chr19:3338656-3338812]
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Tissue distribution of vista28278
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Transcription factor that possibly regulate vista28278[chr19:3338656-3338812]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 3338683 3338698 TFAP2C JASPAR yes 70786301
chr19 3338683 3338698 TFAP2C JASPAR yes 112120834
chr19 3338686 3338697 TFAP2A JASPAR yes 70786302
chr19 3338686 3338697 TFAP2B JASPAR yes 70786303
chr19 3338686 3338697 TFAP2C JASPAR yes 70786304
chr19 3338686 3338697 TFAP2A JASPAR yes 112120835
chr19 3338686 3338697 TFAP2B JASPAR yes 112120836
chr19 3338686 3338697 TFAP2C JASPAR yes 112120837
chr19 3338686 3338698 TFAP2A JASPAR yes 70786305
chr19 3338686 3338698 TFAP2A JASPAR yes 112120838
chr19 3338687 3338696 TFAP2A JASPAR yes 70786306
chr19 3338687 3338696 TFAP2A JASPAR yes 112120839
chr19 3338700 3338720 RREB1 JASPAR yes 70786307
chr19 3338700 3338720 RREB1 JASPAR yes 112120840
chr19 3338701 3338713 GLI2 JASPAR yes 70786308
chr19 3338701 3338713 GLI2 JASPAR yes 112120841
chr19 3338703 3338723 RREB1 JASPAR yes 70786309
chr19 3338703 3338723 RREB1 JASPAR yes 112120842
chr19 3338704 3338709 SP1 TRANSFAC yes 70786310
chr19 3338704 3338709 SP1 TRANSFAC yes 112120843
chr19 3338704 3338724 RREB1 JASPAR yes 70786311
chr19 3338704 3338724 RREB1 JASPAR yes 112120844
chr19 3338705 3338715 SP1 JASPAR yes 70786312
chr19 3338705 3338715 SP1 JASPAR yes 112120845
chr19 3338705 3338725 RREB1 JASPAR yes 70786313
chr19 3338705 3338725 RREB1 JASPAR yes 112120846
chr19 3338706 3338716 SP1 JASPAR yes 70786314
chr19 3338706 3338716 SP1 JASPAR yes 112120847
chr19 3338707 3338712 SP1 TRANSFAC yes 70786315
chr19 3338707 3338712 SP1 TRANSFAC yes 112120848
chr19 3338708 3338713 SP1 TRANSFAC yes 70786316
chr19 3338708 3338713 SP1 TRANSFAC yes 112120849
chr19 3338708 3338714 SP1 TRANSFAC yes 70786317
chr19 3338708 3338714 SP1 TRANSFAC yes 112120850
chr19 3338738 3338755 RARA JASPAR yes 70786318
chr19 3338738 3338755 RXRA JASPAR yes 70786319
chr19 3338738 3338755 RARA JASPAR yes 112120851
chr19 3338738 3338755 RXRA JASPAR yes 112120852
chr19 3338742 3338754 DBP JASPAR yes 70786320
chr19 3338742 3338754 HLF JASPAR yes 70786321
chr19 3338742 3338754 DBP JASPAR yes 112120853
chr19 3338742 3338754 HLF JASPAR yes 112120854
chr19 3338743 3338751 FOXL1 JASPAR yes 70786322
chr19 3338743 3338751 FOXL1 JASPAR yes 112120855
chr19 3338744 3338755 NFIL3 JASPAR yes 70786323
chr19 3338744 3338755 NFIL3 JASPAR yes 112120856
chr19 3338749 3338752 MYB TRANSFAC yes 70786324
chr19 3338749 3338752 MYB TRANSFAC yes 112120857
chr19 3338758 3338773 ZIC3 JASPAR yes 70786325
chr19 3338758 3338773 ZIC3 JASPAR yes 112120858
chr19 3338763 3338774 FLI1 JASPAR yes 70786326
chr19 3338763 3338774 FLI1 JASPAR yes 112120859
chr19 3338764 3338772 FEV JASPAR yes 70786327
chr19 3338764 3338772 FEV JASPAR yes 112120860
chr19 3338765 3338779 STAT1 JASPAR yes 70786328
chr19 3338765 3338779 STAT1 JASPAR yes 112120861
chr19 3338766 3338781 HNF4G JASPAR yes 70786329
chr19 3338766 3338781 HNF4G JASPAR yes 112120862
chr19 3338774 3338785 FOXA1 JASPAR yes 70786330
chr19 3338774 3338785 FOXA1 JASPAR yes 112120863
chr19 3338775 3338784 NFIX JASPAR yes 70786331
chr19 3338775 3338784 NFIX JASPAR yes 112120864
chr19 3338775 3338785 NFIA JASPAR yes 70786332
chr19 3338775 3338785 NFIA JASPAR yes 112120865
chr19 3338777 3338783 NFIC JASPAR yes 70786333
chr19 3338777 3338783 NFIC JASPAR yes 112120866
chr19 3338780 3338793 ZBTB18 JASPAR yes 70786334
chr19 3338780 3338793 ZBTB18 JASPAR yes 112120867
chr19 3338781 3338791 MYF6 JASPAR yes 70786335
chr19 3338781 3338791 MYF6 JASPAR yes 112120868
chr19 3338790 3338805 RFX5 JASPAR yes 70786336
chr19 3338790 3338805 RFX5 JASPAR yes 112120869
chr19 3338798 3338801 MYB TRANSFAC yes 70786337
chr19 3338798 3338801 MYB TRANSFAC yes 112120870
chr19 3338802 3338813 ELK4 JASPAR yes 70786338
chr19 3338802 3338813 FLI1 JASPAR yes 70786339
chr19 3338802 3338813 ELK4 JASPAR yes 112120871
chr19 3338802 3338813 FLI1 JASPAR yes 112120872
chr19 3338803 3338813 ERF JASPAR yes 70786340
chr19 3338803 3338813 ERG JASPAR yes 70786341
chr19 3338803 3338813 ETS1 JASPAR yes 70786342
chr19 3338803 3338813 ETV3 JASPAR yes 70786343
chr19 3338803 3338813 FEV JASPAR yes 70786344
chr19 3338803 3338813 FLI1 JASPAR yes 70786345
chr19 3338803 3338813 GABPA JASPAR yes 70786346
chr19 3338803 3338813 ERF JASPAR yes 112120873
chr19 3338803 3338813 ERG JASPAR yes 112120874
chr19 3338803 3338813 ETS1 JASPAR yes 112120875
chr19 3338803 3338813 ETV3 JASPAR yes 112120876
chr19 3338803 3338813 FEV JASPAR yes 112120877
chr19 3338803 3338813 FLI1 JASPAR yes 112120878
chr19 3338803 3338813 GABPA JASPAR yes 112120879
chr19 3338803 3338814 ETV2 JASPAR yes 70786347
chr19 3338803 3338814 ETV2 JASPAR yes 112120880
chr19 3338803 3338816 ELF1 JASPAR yes 70786348
chr19 3338803 3338816 ELF1 JASPAR yes 112120881
chr19 3338804 3338811 SPI1 JASPAR yes 70786349
chr19 3338804 3338811 SPI1 JASPAR yes 112120882
chr19 3338804 3338812 EHF JASPAR yes 70786350
chr19 3338804 3338812 FEV JASPAR yes 70786351
chr19 3338804 3338812 EHF JASPAR yes 112120883
chr19 3338804 3338812 FEV JASPAR yes 112120884
chr19 3338809 3338813 NFE TRANSFAC yes 70786352
chr19 3338809 3338813 NFE TRANSFAC yes 112120885
SNP sites on vista28278[chr19:3338656-3338812]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 3338719 rs7257108 T C
RREB1
5393225
chr19 3338729 rs560917677 G A no 5393226
chr19 3338774 rs62128024 A G
FLI1 FOXA1 HNF4G STAT1
5393227
Genes possibly regulated by vista28278[chr19:3338656-3338812]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 3359561 3469215 + NFIC ENSG00000141905.13 3359561 0.73 1.0 16805 79251
Expression level of Genes
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miRNAs possibly regulated by vista28278[chr19:3338656-3338812]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results