EnhancerDB
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  3. vista28281[chr19:3360183-3360356]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28281[chr19:3360183-3360356]
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Tissue distribution of vista28281
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Transcription factor that possibly regulate vista28281[chr19:3360183-3360356]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 3359059 3361472 POLR2A UCSC Txn Factor no Conserved 108365790
chr19 3359059 3361472 POLR2A UCSC Txn Factor no Conserved 108365791
chr19 3360012 3360968 E2F1 UCSC Txn Factor no Conserved 108365817
chr19 3360012 3360968 E2F1 UCSC Txn Factor no Conserved 108365818
chr19 3360039 3360369 YY1 UCSC Txn Factor no Conserved 108365821
chr19 3360184 3360196 YY1 JASPAR yes 70786468
chr19 3360205 3360210 SP1 TRANSFAC yes 70786469
chr19 3360240 3360255 HNF4A JASPAR yes 70786470
chr19 3360254 3360259 SP1 TRANSFAC yes 70786471
chr19 3360255 3360260 SP1 TRANSFAC yes 70786472
chr19 3360258 3360263 SP1 TRANSFAC yes 70786473
chr19 3360290 3360295 SP1 TRANSFAC yes 70786474
chr19 3360290 3360296 SP1 TRANSFAC yes 70786475
chr19 3360293 3360299 SP1 TRANSFAC yes 70786476
chr19 3360310 3360315 SP1 TRANSFAC yes 70786477
chr19 3360310 3360316 SP1 TRANSFAC yes 70786478
chr19 3360310 3360317 SP1 TRANSFAC yes 70786479
chr19 3360311 3360319 WT1 TRANSFAC yes 70786480
chr19 3360313 3360322 SP1 TRANSFAC yes 70786481
chr19 3360314 3360320 SP1 TRANSFAC yes 70786482
chr19 3360314 3360324 SP1 JASPAR yes 70786483
chr19 3360315 3360322 SP1 TRANSFAC yes 70786484
chr19 3360316 3360321 SP1 TRANSFAC yes 70786485
chr19 3360316 3360322 SP1 TRANSFAC yes 70786486
chr19 3360318 3360327 SP1 TRANSFAC yes 70786487
chr19 3360319 3360325 SP1 TRANSFAC yes 70786488
chr19 3360319 3360329 SP1 JASPAR yes 70786489
chr19 3360320 3360327 SP1 TRANSFAC yes 70786490
chr19 3360321 3360326 SP1 TRANSFAC yes 70786491
chr19 3360321 3360327 SP1 TRANSFAC yes 70786492
chr19 3360337 3360347 SP1 JASPAR yes 70786493
SNP sites on vista28281[chr19:3360183-3360356]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 3360310 rs111334206 A C
E2F1 POLR2A SP1 YY1
5393479
Genes possibly regulated by vista28281[chr19:3360183-3360356]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 3359561 3469215 + NFIC ENSG00000141905.13 3359561 0.73 1.0 16805 99378
Expression level of Genes
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miRNAs possibly regulated by vista28281[chr19:3360183-3360356]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results