EnhancerDB
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  3. vista28284[chr19:3369394-3369884]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28284[chr19:3369394-3369884]
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Tissue distribution of vista28284
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Transcription factor that possibly regulate vista28284[chr19:3369394-3369884]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 3369383 3369699 EBF1 UCSC Txn Factor no Conserved 108366393
chr19 3369451 3369776 ZNF143 UCSC Txn Factor no Conserved 108366404
chr19 3369373 3369394 ZNF263 JASPAR yes 70786793
chr19 3369373 3369394 ZNF263 JASPAR yes 112123860
chr19 3369390 3369409 REST JASPAR yes 70786794
chr19 3369390 3369409 REST JASPAR yes 112123862
chr19 3369393 3369397 NFE TRANSFAC yes 70786795
chr19 3369393 3369397 NFE TRANSFAC yes 112123863
chr19 3369399 3369419 PPARG JASPAR yes 70786796
chr19 3369399 3369419 PPARG JASPAR yes 112123864
chr19 3369403 3369414 E2F6 JASPAR yes 70786797
chr19 3369403 3369414 E2F6 JASPAR yes 112123865
chr19 3369403 3369424 ZNF263 JASPAR yes 70786798
chr19 3369403 3369424 ZNF263 JASPAR yes 112123866
chr19 3369404 3369425 ZNF263 JASPAR yes 70786799
chr19 3369404 3369425 ZNF263 JASPAR yes 112123867
chr19 3369424 3369439 MEF2A JASPAR yes 70786800
chr19 3369424 3369439 MEF2A JASPAR yes 112123868
chr19 3369425 3369440 MEF2C JASPAR yes 70786801
chr19 3369425 3369440 MEF2C JASPAR yes 112123869
chr19 3369430 3369440 HOXD11 JASPAR yes 70786802
chr19 3369430 3369440 HOXD11 JASPAR yes 112123870
chr19 3369430 3369441 HOXC11 JASPAR yes 70786803
chr19 3369430 3369441 HOXC12 JASPAR yes 70786804
chr19 3369430 3369441 HOXC13 JASPAR yes 70786805
chr19 3369430 3369441 HOXC11 JASPAR yes 112123871
chr19 3369430 3369441 HOXC12 JASPAR yes 112123872
chr19 3369430 3369441 HOXC13 JASPAR yes 112123873
chr19 3369443 3369458 IRF9 JASPAR yes 70786806
chr19 3369443 3369458 IRF9 JASPAR yes 112123874
chr19 3369447 3369462 MEF2C JASPAR yes 70786807
chr19 3369447 3369462 MEF2C JASPAR yes 112123875
chr19 3369448 3369463 MEF2A JASPAR yes 70786808
chr19 3369448 3369463 MEF2A JASPAR yes 112123876
chr19 3369453 3369469 E2F2 JASPAR yes 70786809
chr19 3369453 3369469 E2F2 JASPAR yes 112123877
chr19 3369479 3369490 SPDEF JASPAR yes 70786810
chr19 3369479 3369490 SPDEF JASPAR yes 112123878
chr19 3369499 3369519 RREB1 JASPAR yes 70786811
chr19 3369499 3369519 RREB1 JASPAR yes 112123879
chr19 3369501 3369522 ZNF263 JASPAR yes 70786812
chr19 3369501 3369522 ZNF263 JASPAR yes 112123880
chr19 3369502 3369522 RREB1 JASPAR yes 70786813
chr19 3369502 3369522 RREB1 JASPAR yes 112123881
chr19 3369503 3369523 RREB1 JASPAR yes 70786814
chr19 3369503 3369523 RREB1 JASPAR yes 112123882
chr19 3369504 3369518 GLIS2 JASPAR yes 70786815
chr19 3369504 3369518 GLIS2 JASPAR yes 112123883
chr19 3369506 3369526 RREB1 JASPAR yes 70786816
chr19 3369506 3369526 RREB1 JASPAR yes 112123884
chr19 3369507 3369512 SP1 TRANSFAC yes 70786817
chr19 3369507 3369512 SP1 TRANSFAC yes 112123885
chr19 3369507 3369513 SP1 TRANSFAC yes 70786818
chr19 3369507 3369513 SP1 TRANSFAC yes 112123886
chr19 3369510 3369520 SP1 JASPAR yes 70786819
chr19 3369510 3369520 SP1 JASPAR yes 112123887
chr19 3369510 3369525 NR2C2 JASPAR yes 70786820
chr19 3369510 3369525 NR2C2 JASPAR yes 112123888
chr19 3369511 3369521 SP1 JASPAR yes 70786821
chr19 3369511 3369521 SP1 JASPAR yes 112123889
chr19 3369514 3369519 SP1 TRANSFAC yes 70786822
chr19 3369514 3369519 SP1 TRANSFAC yes 112123890
chr19 3369520 3369524 LFA1 TRANSFAC yes 70786823
chr19 3369520 3369524 LFA1 TRANSFAC yes 112123891
chr19 3369546 3369559 TFAP2A JASPAR yes 70786824
chr19 3369546 3369559 TFAP2A JASPAR yes 112123892
chr19 3369571 3369576 TFAP2A TRANSFAC yes 70786825
chr19 3369571 3369576 TFAP2A TRANSFAC yes 112123893
chr19 3369571 3369577 MZF1 JASPAR yes 70786826
chr19 3369571 3369577 MZF1 JASPAR yes 112123894
chr19 3369589 3369601 TFAP2A JASPAR yes 70786827
chr19 3369589 3369601 TFAP2B JASPAR yes 70786828
chr19 3369589 3369601 TFAP2C JASPAR yes 70786829
chr19 3369589 3369601 TFAP2A JASPAR yes 112123895
chr19 3369589 3369601 TFAP2B JASPAR yes 112123896
chr19 3369589 3369601 TFAP2C JASPAR yes 112123897
chr19 3369589 3369604 TFAP2A JASPAR yes 70786830
chr19 3369589 3369604 TFAP2C JASPAR yes 70786831
chr19 3369589 3369604 TFAP2A JASPAR yes 112123898
chr19 3369589 3369604 TFAP2C JASPAR yes 112123899
chr19 3369590 3369599 TFAP2A JASPAR yes 70786832
chr19 3369590 3369599 TFAP2A JASPAR yes 112123900
chr19 3369591 3369600 TFAP2A JASPAR yes 70786833
chr19 3369591 3369600 TFAP2A JASPAR yes 112123901
chr19 3369594 3369610 ZNF143 JASPAR yes 70786834
chr19 3369594 3369610 ZNF143 JASPAR yes 112123902
chr19 3369596 3369600 LFA1 TRANSFAC yes 70786835
chr19 3369596 3369600 LFA1 TRANSFAC yes 112123903
chr19 3369608 3369619 TFAP2A JASPAR yes 70786836
chr19 3369608 3369619 TFAP2A JASPAR yes 112123904
chr19 3369608 3369620 TFAP2A JASPAR yes 70786837
chr19 3369608 3369620 TFAP2A JASPAR yes 112123905
chr19 3369609 3369618 TFAP2A JASPAR yes 70786838
chr19 3369609 3369618 TFAP2A JASPAR yes 112123906
chr19 3369627 3369638 JUNB JASPAR yes 70786839
chr19 3369627 3369638 JUNB JASPAR yes 112123907
chr19 3369628 3369639 FOSL1 JASPAR yes 70786840
chr19 3369628 3369639 FOSL1 JASPAR yes 112123908
chr19 3369629 3369636 JUN TRANSFAC yes 70786841
chr19 3369629 3369636 JUN TRANSFAC yes 112123909
chr19 3369638 3369659 IRF1 JASPAR yes 70786842
chr19 3369638 3369659 IRF1 JASPAR yes 112123910
chr19 3369640 3369655 PRDM1 JASPAR yes 70786843
chr19 3369640 3369655 PRDM1 JASPAR yes 112123911
chr19 3369642 3369654 IRF1 JASPAR yes 70786844
chr19 3369642 3369654 IRF1 JASPAR yes 112123912
chr19 3369642 3369656 IRF7 JASPAR yes 70786845
chr19 3369642 3369656 IRF7 JASPAR yes 112123913
chr19 3369646 3369661 PRDM1 JASPAR yes 70786846
chr19 3369646 3369661 PRDM1 JASPAR yes 112123914
chr19 3369657 3369671 SPI1 JASPAR yes 70786847
chr19 3369657 3369671 SPI1 JASPAR yes 112123915
chr19 3369661 3369668 SPIB JASPAR yes 70786848
chr19 3369661 3369668 SPIB JASPAR yes 112123916
chr19 3369687 3369697 HOXB13 JASPAR yes 70786849
chr19 3369687 3369697 HOXD13 JASPAR yes 70786850
chr19 3369687 3369697 HOXB13 JASPAR yes 112123917
chr19 3369687 3369697 HOXD13 JASPAR yes 112123918
chr19 3369701 3369712 E2F4 JASPAR yes 70786851
chr19 3369701 3369712 E2F6 JASPAR yes 70786852
chr19 3369701 3369712 E2F4 JASPAR yes 112123919
chr19 3369701 3369712 E2F6 JASPAR yes 112123920
chr19 3369702 3369707 SP1 TRANSFAC yes 70786853
chr19 3369702 3369707 SP1 TRANSFAC yes 112123921
chr19 3369705 3369710 ETS2 TRANSFAC yes 70786854
chr19 3369705 3369710 ETS2 TRANSFAC yes 112123922
chr19 3369722 3369733 NRF1 JASPAR yes 70786855
chr19 3369722 3369733 NRF1 JASPAR yes 112123923
chr19 3369736 3369747 E2F6 JASPAR yes 70786856
chr19 3369736 3369747 E2F6 JASPAR yes 112123924
chr19 3369736 3369757 ZNF263 JASPAR yes 70786857
chr19 3369736 3369757 ZNF263 JASPAR yes 112123925
chr19 3369737 3369758 ZNF263 JASPAR yes 70786858
chr19 3369737 3369758 ZNF263 JASPAR yes 112123926
chr19 3369744 3369754 SP1 JASPAR yes 70786859
chr19 3369744 3369754 SP1 JASPAR yes 112123927
chr19 3369748 3369759 E2F6 JASPAR yes 70786860
chr19 3369748 3369759 E2F6 JASPAR yes 112123928
chr19 3369752 3369763 E2F4 JASPAR yes 70786861
chr19 3369752 3369763 E2F4 JASPAR yes 112123929
chr19 3369789 3369801 INSM1 JASPAR yes 70786862
chr19 3369789 3369801 INSM1 JASPAR yes 112123930
chr19 3369794 3369799 SP1 TRANSFAC yes 70786863
chr19 3369794 3369799 SP1 TRANSFAC yes 112123931
chr19 3369822 3369835 NFKB1 JASPAR yes 70786864
chr19 3369822 3369835 NFKB1 JASPAR yes 112123932
chr19 3369857 3369861 H4TF2 TRANSFAC yes 70786865
chr19 3369857 3369861 H4TF2 TRANSFAC yes 112123933
chr19 3369862 3369866 NFE TRANSFAC yes 70786866
chr19 3369862 3369866 NFE TRANSFAC yes 112123934
chr19 3369882 3369887 ETS2 TRANSFAC yes 70786867
chr19 3369882 3369887 ETS2 TRANSFAC yes 112123935
SNP sites on vista28284[chr19:3369394-3369884]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 3369394 rs147983561 C A
EBF1 NFE REST ZNF263
5393624
chr19 3369495 rs534344969 G A,C
EBF1 ZNF143
5393625
chr19 3369511 rs577374656 G A
EBF1 GLIS2 NR2C2 RREB1 SP1 ZNF143 ZNF263
5393626
chr19 3369516 rs539719031 G A
EBF1 GLIS2 NR2C2 RREB1 SP1 ZNF143 ZNF263
5393627
chr19 3369566 rs140711594 G A
EBF1 ZNF143
5393628
chr19 3369572 rs11085015 T G
EBF1 MZF1 TFAP2A ZNF143
5393629
chr19 3369620 rs370188304 G A
EBF1 TFAP2A ZNF143
5393630
chr19 3369715 rs533991592 G A
ZNF143
5393631
chr19 3369753 rs78325792 C G
E2F4 E2F6 SP1 ZNF143 ZNF263
5393632
chr19 3369878 rs7250654 G A no 5393633
Genes possibly regulated by vista28284[chr19:3369394-3369884]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 3359561 3469215 + NFIC ENSG00000141905.13 3359561 0.73 1.0 16805 90167
Expression level of Genes
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miRNAs possibly regulated by vista28284[chr19:3369394-3369884]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results